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The map label for this gene is rpmH

Identifier: 189184290

GI number: 189184290

Start: 1411717

End: 1411851

Strand: Reverse

Name: rpmH

Synonym: OTT_1383

Alternate gene names: 189184290

Gene position: 1411851-1411717 (Counterclockwise)

Preceding gene: 189184292

Following gene: 189184289

Centisome position: 70.28

GC content: 41.48

Gene sequence:

>135_bases
ATGAAACGTACTTATCAACCCAGTAAATTAGTTAGAAAAAGAAGGCATGGGTTTATGGAGCGCATGTCTAGTGTAGGAGG
TAGGAGAGTGTTAATGAGGCGCCGTATGAAAGGTAGAAGGGTGTTATCTGCATAA

Upstream 100 bases:

>100_bases
AGAATAAATATATATGTTACTCAATTTATACCATTGCATACACTAATATTTTGTGCTAATCTTAGAAAAAAGTGTTAAAA
ATCATCTTAGGGTTAAAATT

Downstream 100 bases:

>100_bases
ATGAAGCTTCGTAAAAAGCTTATTATTGATTCACTAAAAAGTAAGGCTGCTTTTACAGCGATCAATAAGTATGGAAAAAA
GTTAGTAAGTAAAAGCTTAA

Product: 50S ribosomal protein L34

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 44; Mature: 44

Protein sequence:

>44_residues
MKRTYQPSKLVRKRRHGFMERMSSVGGRRVLMRRRMKGRRVLSA

Sequences:

>Translated_44_residues
MKRTYQPSKLVRKRRHGFMERMSSVGGRRVLMRRRMKGRRVLSA
>Mature_44_residues
MKRTYQPSKLVRKRRHGFMERMSSVGGRRVLMRRRMKGRRVLSA

Specific function: Unknown

COG id: COG0230

COG function: function code J; Ribosomal protein L34

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein L34P family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RL34_ORITB (A5CCC8)

Other databases:

- EMBL:   AM494475
- RefSeq:   YP_001248228.1
- ProteinModelPortal:   A5CCC8
- SMR:   A5CCC8
- STRING:   A5CCC8
- GeneID:   5218582
- GenomeReviews:   AM494475_GR
- KEGG:   ots:OTBS_0257
- eggNOG:   NOG128776
- HOGENOM:   HBG729750
- ProtClustDB:   PRK00399
- BioCyc:   OTSU357244:OTBS_0257-MONOMER
- GO:   GO:0005840
- GO:   GO:0006412
- HAMAP:   MF_00391
- InterPro:   IPR000271
- InterPro:   IPR020939
- ProDom:   PD003101
- TIGRFAMs:   TIGR01030

Pfam domain/function: PF00468 Ribosomal_L34

EC number: NA

Molecular weight: Translated: 5348; Mature: 5348

Theoretical pI: Translated: 12.98; Mature: 12.98

Prosite motif: PS00784 RIBOSOMAL_L34

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
11.4 %Met     (Translated Protein)
11.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
11.4 %Met     (Mature Protein)
11.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRTYQPSKLVRKRRHGFMERMSSVGGRRVLMRRRMKGRRVLSA
CCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKRTYQPSKLVRKRRHGFMERMSSVGGRRVLMRRRMKGRRVLSA
CCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA