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The map label for this gene is rpsU [H]

Identifier: 189184261

GI number: 189184261

Start: 1383129

End: 1383335

Strand: Direct

Name: rpsU [H]

Synonym: OTT_1354

Alternate gene names: 189184261

Gene position: 1383129-1383335 (Clockwise)

Preceding gene: 189184253

Following gene: 189184263

Centisome position: 68.85

GC content: 40.58

Gene sequence:

>207_bases
GTGATTCATGTGCCAGTTAATGCGAATAATAGTGAGTTGGCTATTAGAAGTCTAAAAAAGAAAATGCAGAGGGAGCTTGT
TTTTCGTTCAATGAAAATGTCTCGCTTTTATGAACCTCCTTCAGTAAAGAGAGTAAGAAAAAAGCAAGAATCAGAGCGTA
GGCACAGAAAGGAGAGGGCGATGAGGCGCCGAATGATGGAAGAATAG

Upstream 100 bases:

>100_bases
AATTAAATATTAAGTAAAATTACTAATTAGAGCTTATATTTACTAATAATCAAGAATAAGCATATTTTATATATTTTAAG
GATTAAGGAGTAATGAAATT

Downstream 100 bases:

>100_bases
TAAATCATATTTAATTCAAGAATTTATCTTAAATTAATTCATCAGTTAATAGTTGCCATTGAGCTTGCTTATTCTTATTT
TGTTGTTTTTGCTTAAAGTA

Product: 30S ribosomal protein S21

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 68; Mature: 68

Protein sequence:

>68_residues
MIHVPVNANNSELAIRSLKKKMQRELVFRSMKMSRFYEPPSVKRVRKKQESERRHRKERAMRRRMMEE

Sequences:

>Translated_68_residues
MIHVPVNANNSELAIRSLKKKMQRELVFRSMKMSRFYEPPSVKRVRKKQESERRHRKERAMRRRMMEE
>Mature_68_residues
MIHVPVNANNSELAIRSLKKKMQRELVFRSMKMSRFYEPPSVKRVRKKQESERRHRKERAMRRRMMEE

Specific function: Unknown

COG id: COG0828

COG function: function code J; Ribosomal protein S21

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein S21P family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001911
- ProDom:   PD005521 [H]

Pfam domain/function: PF01165 Ribosomal_S21 [H]

EC number: NA

Molecular weight: Translated: 8444; Mature: 8444

Theoretical pI: Translated: 12.05; Mature: 12.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
10.3 %Met     (Translated Protein)
10.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
10.3 %Met     (Mature Protein)
10.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIHVPVNANNSELAIRSLKKKMQRELVFRSMKMSRFYEPPSVKRVRKKQESERRHRKERA
CEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH
MRRRMMEE
HHHHHCCC
>Mature Secondary Structure
MIHVPVNANNSELAIRSLKKKMQRELVFRSMKMSRFYEPPSVKRVRKKQESERRHRKERA
CEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH
MRRRMMEE
HHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA