| Definition | Orientia tsutsugamushi str. Ikeda, complete genome. |
|---|---|
| Accession | NC_010793 |
| Length | 2,008,987 |
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The map label for this gene is proP4 [H]
Identifier: 189184263
GI number: 189184263
Start: 1383968
End: 1385209
Strand: Direct
Name: proP4 [H]
Synonym: OTT_1356
Alternate gene names: 189184263
Gene position: 1383968-1385209 (Clockwise)
Preceding gene: 189184261
Following gene: 189184264
Centisome position: 68.89
GC content: 30.92
Gene sequence:
>1242_bases ATGTTTCAATCTTATAAAACCTTTTTATTAATCTTGCTTGGTAATGCCCTAGATCATTATAACACAGCTTTATACATATT TCTAGCTCCATACTTAGCGAGTAATTTTCTTGACTTTAAGAGTGAAGTTATTTCTCTGATTGTAGTACATAGTTTGTTCT CCTCCTGTACCATTATTGCTAAGCCAGTAGGAGTATGGTTTTTTGGCTGGTTAGTTAATATCGTTGATTCAAGGAAAGTG TTGTTAATTACTCTAGGTGGAGTAGCTTTTACAACTTTTTCTGTTGCTATTATTCCAAGTTATGAATCTATTGGTATAGC AGCTACAATTTTGTTAATTCTAGCTAAAGTTGCGCAAGGGTTTTTTGCGGCTGGAGAAGTAGGTATATCATCTATACTTA TATTTAATACAGTTAAAAGTAAAGAGTTTATTAAAGCTAATAGCTATTACCAGTGCTCAACGATGATAGGTATTATATTG GCTTCTGCTATTGCTACTATAATAAGTAGCAGCACAGCATCATTTGCGAACTGGCGATATGCTTTTGCTTTAGGAATGCT AACTGGAATTATTGGATTATGTCTTAGGTTAGTAATATTTTCAAATAGCAATAGTGTCAATTATACTGCATATCACAAAA ATGTTATGACGCATTCTTCAAAATCTAATCAGACCATATCATCTAAATTTTTCTTATTATTAAAAGTTTCGTGCTTGCAT GGATTAAGTTATATTACTTATGCTGTTCCATTTGTTATATTAGATAATATTATACCTTTAATTAGCAATATTTCTCGTAC AGAAATACTTGCATATAGTAATGTACTTATGTATTTTGATGCTGCTATGATAGTAGCTATAGGGCATATAATACGGAGTA ATAATTATAAAATATGGATGTTATTAGCCGTAATACTATTTGCTGTAACGATAATACCATGCTTTGTTTATCTTTCAAAG TTACCATTACAAGTCATTATTTTAATCAAATGCTGGATAATATTTTGTGGAGTAGTTTTTACATCATTATTAAATGTGTG GTTGGTTCAAAAAGTTGATGGTAACAAATATTTATTTATAGGAATTGGGTATGTTATTGGCTGTGAATTCTGGGGCCGCA GTAGCATCGCAATATGCTTAGCGTTATGGCAATATTTTAATGATCTTATAGCTCCAGCAATTTACATAACAGCAGTATGC ATTTGTGCAGTTTCATTTCTTTTAATAGATATCTATCGTTAG
Upstream 100 bases:
>100_bases AATCATTTAATTATTTTTTTAGGTTAGTAGAAAATCAATTAATAAGTATAGATGATATGCAAAAATATAAAATACTTTAT GCAAATACTTTATAATATTG
Downstream 100 bases:
>100_bases AAGACATCTTGTTGAGAAGACATCTTGTTGTAAACCTTGAAAATGAAAATTAAACCTGTGCTATATTTTATTAGCTATTT TCCATAATATTAATTATATA
Product: proline/betaine transporter
Products: betaine [Cytoplasm]; Proton [Cytoplasm]; L-proline [Cytoplasm] [C]
Alternate protein names: Proline porter II; PPII [H]
Number of amino acids: Translated: 413; Mature: 413
Protein sequence:
>413_residues MFQSYKTFLLILLGNALDHYNTALYIFLAPYLASNFLDFKSEVISLIVVHSLFSSCTIIAKPVGVWFFGWLVNIVDSRKV LLITLGGVAFTTFSVAIIPSYESIGIAATILLILAKVAQGFFAAGEVGISSILIFNTVKSKEFIKANSYYQCSTMIGIIL ASAIATIISSSTASFANWRYAFALGMLTGIIGLCLRLVIFSNSNSVNYTAYHKNVMTHSSKSNQTISSKFFLLLKVSCLH GLSYITYAVPFVILDNIIPLISNISRTEILAYSNVLMYFDAAMIVAIGHIIRSNNYKIWMLLAVILFAVTIIPCFVYLSK LPLQVIILIKCWIIFCGVVFTSLLNVWLVQKVDGNKYLFIGIGYVIGCEFWGRSSIAICLALWQYFNDLIAPAIYITAVC ICAVSFLLIDIYR
Sequences:
>Translated_413_residues MFQSYKTFLLILLGNALDHYNTALYIFLAPYLASNFLDFKSEVISLIVVHSLFSSCTIIAKPVGVWFFGWLVNIVDSRKV LLITLGGVAFTTFSVAIIPSYESIGIAATILLILAKVAQGFFAAGEVGISSILIFNTVKSKEFIKANSYYQCSTMIGIIL ASAIATIISSSTASFANWRYAFALGMLTGIIGLCLRLVIFSNSNSVNYTAYHKNVMTHSSKSNQTISSKFFLLLKVSCLH GLSYITYAVPFVILDNIIPLISNISRTEILAYSNVLMYFDAAMIVAIGHIIRSNNYKIWMLLAVILFAVTIIPCFVYLSK LPLQVIILIKCWIIFCGVVFTSLLNVWLVQKVDGNKYLFIGIGYVIGCEFWGRSSIAICLALWQYFNDLIAPAIYITAVC ICAVSFLLIDIYR >Mature_413_residues MFQSYKTFLLILLGNALDHYNTALYIFLAPYLASNFLDFKSEVISLIVVHSLFSSCTIIAKPVGVWFFGWLVNIVDSRKV LLITLGGVAFTTFSVAIIPSYESIGIAATILLILAKVAQGFFAAGEVGISSILIFNTVKSKEFIKANSYYQCSTMIGIIL ASAIATIISSSTASFANWRYAFALGMLTGIIGLCLRLVIFSNSNSVNYTAYHKNVMTHSSKSNQTISSKFFLLLKVSCLH GLSYITYAVPFVILDNIIPLISNISRTEILAYSNVLMYFDAAMIVAIGHIIRSNNYKIWMLLAVILFAVTIIPCFVYLSK LPLQVIILIKCWIIFCGVVFTSLLNVWLVQKVDGNKYLFIGIGYVIGCEFWGRSSIAICLALWQYFNDLIAPAIYITAVC ICAVSFLLIDIYR
Specific function: Proton symporter that senses osmotic shifts and responds by importing osmolytes such as proline, glycine betaine, stachydrine, pipecolic acid, ectoine and taurine. It is both an osmosensor and an osmoregulator which is available to participate early in th
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family [H]
Homologues:
Organism=Escherichia coli, GI1790550, Length=188, Percent_Identity=32.4468085106383, Blast_Score=92, Evalue=8e-20,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004736 - InterPro: IPR020846 - InterPro: IPR016196 - InterPro: IPR015041 - InterPro: IPR005828 - InterPro: IPR005829 [H]
Pfam domain/function: PF08946 Osmo_CC; PF00083 Sugar_tr [H]
EC number: NA
Molecular weight: Translated: 45799; Mature: 45799
Theoretical pI: Translated: 8.90; Mature: 8.90
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFQSYKTFLLILLGNALDHYNTALYIFLAPYLASNFLDFKSEVISLIVVHSLFSSCTIIA CCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH KPVGVWFFGWLVNIVDSRKVLLITLGGVAFTTFSVAIIPSYESIGIAATILLILAKVAQG HHHHHHHHHHHHHHHCCCEEEEEEECCHHHHHEEEEEECCCHHHHHHHHHHHHHHHHHHH FFAAGEVGISSILIFNTVKSKEFIKANSYYQCSTMIGIILASAIATIISSSTASFANWRY HHHHCHHHHHHEEEEEECCCHHHHCCCCCEEHHHHHHHHHHHHHHHHHHCCCCHHHHHHH AFALGMLTGIIGLCLRLVIFSNSNSVNYTAYHKNVMTHSSKSNQTISSKFFLLLKVSCLH HHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECHHHHCCCCCCCHHHHHHHHHHHHHHHH GLSYITYAVPFVILDNIIPLISNISRTEILAYSNVLMYFDAAMIVAIGHIIRSNNYKIWM HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH LLAVILFAVTIIPCFVYLSKLPLQVIILIKCWIIFCGVVFTSLLNVWLVQKVDGNKYLFI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCEEEEE GIGYVIGCEFWGRSSIAICLALWQYFNDLIAPAIYITAVCICAVSFLLIDIYR EEHHHHCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MFQSYKTFLLILLGNALDHYNTALYIFLAPYLASNFLDFKSEVISLIVVHSLFSSCTIIA CCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH KPVGVWFFGWLVNIVDSRKVLLITLGGVAFTTFSVAIIPSYESIGIAATILLILAKVAQG HHHHHHHHHHHHHHHCCCEEEEEEECCHHHHHEEEEEECCCHHHHHHHHHHHHHHHHHHH FFAAGEVGISSILIFNTVKSKEFIKANSYYQCSTMIGIILASAIATIISSSTASFANWRY HHHHCHHHHHHEEEEEECCCHHHHCCCCCEEHHHHHHHHHHHHHHHHHHCCCCHHHHHHH AFALGMLTGIIGLCLRLVIFSNSNSVNYTAYHKNVMTHSSKSNQTISSKFFLLLKVSCLH HHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECHHHHCCCCCCCHHHHHHHHHHHHHHHH GLSYITYAVPFVILDNIIPLISNISRTEILAYSNVLMYFDAAMIVAIGHIIRSNNYKIWM HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH LLAVILFAVTIIPCFVYLSKLPLQVIILIKCWIIFCGVVFTSLLNVWLVQKVDGNKYLFI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCEEEEE GIGYVIGCEFWGRSSIAICLALWQYFNDLIAPAIYITAVCICAVSFLLIDIYR EEHHHHCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: betaine [Periplasm]; Proton [Periplasm]; L-proline [Periplasm] [C]
Specific reaction: Proton [Periplasm] + betaine [Periplasm] = Proton [Cytoplasm] + betaine [Cytoplasm] Proton [Periplasm] + L-proline [Periplasm] = Proton [Cytoplasm] + L-proline [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]