| Definition | Orientia tsutsugamushi str. Ikeda, complete genome. |
|---|---|
| Accession | NC_010793 |
| Length | 2,008,987 |
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The map label for this gene is pssA [H]
Identifier: 189184251
GI number: 189184251
Start: 1368309
End: 1369082
Strand: Direct
Name: pssA [H]
Synonym: OTT_1344
Alternate gene names: 189184251
Gene position: 1368309-1369082 (Clockwise)
Preceding gene: 189184250
Following gene: 189184252
Centisome position: 68.11
GC content: 29.33
Gene sequence:
>774_bases ATGGGAAAATATCAGCTTTTTAAAAAGCCTAAATTAAGCTATCCAATGCCTTTTATTAAGTTGTTTCCTAGTATAATTAC ATTATTGGGGTTATCTATAGGCATAAGTTCTATACGATATGCGCTTGATGATAAATGGGAGATAGCTGTAGTTTGTATAT TAGTTGCTGTAATAGTTGATGGCATTGATGGTAGAATAGCTAGACTACTTAATGCTACTTCTACTTTTGGAGCGGAGTTA GACTCACTTTGTGATTTTGTTAATTTTGGATTATCAGCAGCATTAGTTACATATTTATGGCTAGCTCCTACTCAACAGCA AAAATTAGTGTCTTGGATATCTGTATTAGTATTTGTCATTTGTATAGCTATTAGATTAGCAAGATTTAATATTGGTATAC TAAATAATGAATCTAGTAATAAGAAAAAATATTTTTTTGTTGGAGTGCCAGCTCCTGTAGGTGCATTGTTATGTTTAATG CCTGTTATGCTAGATTTTGATATTCTTCCAATCTGGAACTTGCAAATTAGAAATTATAAACTTTGTATTAATATTTACTT ACTAATTGTTGGGTTTTTGATGGCAAGCAGGATTCCTACATTTTCAATAAAGAATATTGTTATTAGACCTCAATATATTT GGATTTGTTTATTATTATTTGCTACCATAGGAGTTACTCTATTGATTTATCCATGGTATATTATTCCTGCATTTGCTTTA AGTTATATTATTAGTATTCCAGTAAGTATAGTTATAGCTAGAAGAATTAATTAA
Upstream 100 bases:
>100_bases TGATTTTAAATCAAAAAGAATTGCACCTTCAAAGTATGACACTAAATAATACATTACGCAGATAAAAAATTTAAATATCG AATAATGTATTAGAAATTTT
Downstream 100 bases:
>100_bases TATTGAATATAATTGTATTATATTCAATATTTTTTTTAGTATAAAATATATGTTGTATGCTAAATTACAGCATTTAGTTG CTTTACTTACTGCTTGGATT
Product: CDP-diacylglycerol--serine O-phosphatidyltransferase
Products: NA
Alternate protein names: Phosphatidylserine synthase [H]
Number of amino acids: Translated: 257; Mature: 256
Protein sequence:
>257_residues MGKYQLFKKPKLSYPMPFIKLFPSIITLLGLSIGISSIRYALDDKWEIAVVCILVAVIVDGIDGRIARLLNATSTFGAEL DSLCDFVNFGLSAALVTYLWLAPTQQQKLVSWISVLVFVICIAIRLARFNIGILNNESSNKKKYFFVGVPAPVGALLCLM PVMLDFDILPIWNLQIRNYKLCINIYLLIVGFLMASRIPTFSIKNIVIRPQYIWICLLLFATIGVTLLIYPWYIIPAFAL SYIISIPVSIVIARRIN
Sequences:
>Translated_257_residues MGKYQLFKKPKLSYPMPFIKLFPSIITLLGLSIGISSIRYALDDKWEIAVVCILVAVIVDGIDGRIARLLNATSTFGAEL DSLCDFVNFGLSAALVTYLWLAPTQQQKLVSWISVLVFVICIAIRLARFNIGILNNESSNKKKYFFVGVPAPVGALLCLM PVMLDFDILPIWNLQIRNYKLCINIYLLIVGFLMASRIPTFSIKNIVIRPQYIWICLLLFATIGVTLLIYPWYIIPAFAL SYIISIPVSIVIARRIN >Mature_256_residues GKYQLFKKPKLSYPMPFIKLFPSIITLLGLSIGISSIRYALDDKWEIAVVCILVAVIVDGIDGRIARLLNATSTFGAELD SLCDFVNFGLSAALVTYLWLAPTQQQKLVSWISVLVFVICIAIRLARFNIGILNNESSNKKKYFFVGVPAPVGALLCLMP VMLDFDILPIWNLQIRNYKLCINIYLLIVGFLMASRIPTFSIKNIVIRPQYIWICLLLFATIGVTLLIYPWYIIPAFALS YIISIPVSIVIARRIN
Specific function: Unknown
COG id: COG1183
COG function: function code I; Phosphatidylserine synthase
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CDP-alcohol phosphatidyltransferase class-I family [H]
Homologues:
Organism=Saccharomyces cerevisiae, GI6320864, Length=131, Percent_Identity=36.6412213740458, Blast_Score=71, Evalue=2e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004533 - InterPro: IPR000462 [H]
Pfam domain/function: PF01066 CDP-OH_P_transf [H]
EC number: =2.7.8.8 [H]
Molecular weight: Translated: 28927; Mature: 28796
Theoretical pI: Translated: 9.75; Mature: 9.75
Prosite motif: PS00379 CDP_ALCOHOL_P_TRANSF ; PS00308 LECTIN_LEGUME_ALPHA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGKYQLFKKPKLSYPMPFIKLFPSIITLLGLSIGISSIRYALDDKWEIAVVCILVAVIVD CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHC GIDGRIARLLNATSTFGAELDSLCDFVNFGLSAALVTYLWLAPTQQQKLVSWISVLVFVI CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH CIAIRLARFNIGILNNESSNKKKYFFVGVPAPVGALLCLMPVMLDFDILPIWNLQIRNYK HHHHHHHHHHEEEECCCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCEEEEEEECCHH LCINIYLLIVGFLMASRIPTFSIKNIVIRPQYIWICLLLFATIGVTLLIYPWYIIPAFAL HHHHHHHHHHHHHHHHCCCCEECCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SYIISIPVSIVIARRIN HHHHHHHHHHHHHHCCC >Mature Secondary Structure GKYQLFKKPKLSYPMPFIKLFPSIITLLGLSIGISSIRYALDDKWEIAVVCILVAVIVD CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHC GIDGRIARLLNATSTFGAELDSLCDFVNFGLSAALVTYLWLAPTQQQKLVSWISVLVFVI CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH CIAIRLARFNIGILNNESSNKKKYFFVGVPAPVGALLCLMPVMLDFDILPIWNLQIRNYK HHHHHHHHHHEEEECCCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCEEEEEEECCHH LCINIYLLIVGFLMASRIPTFSIKNIVIRPQYIWICLLLFATIGVTLLIYPWYIIPAFAL HHHHHHHHHHHHHHHHCCCCEECCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SYIISIPVSIVIARRIN HHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11234002 [H]