| Definition | Orientia tsutsugamushi str. Ikeda, complete genome. |
|---|---|
| Accession | NC_010793 |
| Length | 2,008,987 |
Click here to switch to the map view.
The map label for this gene is 189184252
Identifier: 189184252
GI number: 189184252
Start: 1369132
End: 1369617
Strand: Direct
Name: 189184252
Synonym: OTT_1345
Alternate gene names: NA
Gene position: 1369132-1369617 (Clockwise)
Preceding gene: 189184251
Following gene: 189184253
Centisome position: 68.15
GC content: 29.63
Gene sequence:
>486_bases ATGTTGTATGCTAAATTACAGCATTTAGTTGCTTTACTTACTGCTTGGATTGGGCTGATGGGGCTAGGAGATGTATATCA TCATCCATACTTAAGTTTGATATCTATTTTCATAACTTATTTTGTATCTTTGTATTTCAAATTATTTTCTATTACGCCAG TTCCTATTATAAAATCTATGGTGTATTGTATATGGTTATTAGTTGAAGTAGTAAAATCTACTATAGTTGTTACTAGGCTT ATTTGGCAAGATAATTTACAGCTTAATTCTTGTATGTTATGGCTAGAATTTAGCGAACTTTCTGAGGCAGAAAAAGTAAT ATATGCAAATAGCATTACTCTTACACCTGGTACAGCAGTAGTAGACACAACTCAGGATAAAATATTAGTTCATGTTTTAA ATGTAGAAAATGCTATACTAGATAACACTGAGTTATATGCTGATTTTCTTAAGCTAAAAAATAGAATATTAAAGATTAGG CAATGA
Upstream 100 bases:
>100_bases TATATTATTAGTATTCCAGTAAGTATAGTTATAGCTAGAAGAATTAATTAATATTGAATATAATTGTATTATATTCAATA TTTTTTTTAGTATAAAATAT
Downstream 100 bases:
>100_bases TACTTATAGTAGGACTATTTATTTTAACAGGATGTATATTTGTCTTAATAGTTAATTTTTTATTAGCTAAATCTAATCTA GAAAGAATATTATATATTAA
Product: hypothetical protein
Products: NA
Alternate protein names: Na+/H+ Antiporter; Multisubunit Na+/H+ Antiporter MnhE Subunit
Number of amino acids: Translated: 161; Mature: 161
Protein sequence:
>161_residues MLYAKLQHLVALLTAWIGLMGLGDVYHHPYLSLISIFITYFVSLYFKLFSITPVPIIKSMVYCIWLLVEVVKSTIVVTRL IWQDNLQLNSCMLWLEFSELSEAEKVIYANSITLTPGTAVVDTTQDKILVHVLNVENAILDNTELYADFLKLKNRILKIR Q
Sequences:
>Translated_161_residues MLYAKLQHLVALLTAWIGLMGLGDVYHHPYLSLISIFITYFVSLYFKLFSITPVPIIKSMVYCIWLLVEVVKSTIVVTRL IWQDNLQLNSCMLWLEFSELSEAEKVIYANSITLTPGTAVVDTTQDKILVHVLNVENAILDNTELYADFLKLKNRILKIR Q >Mature_161_residues MLYAKLQHLVALLTAWIGLMGLGDVYHHPYLSLISIFITYFVSLYFKLFSITPVPIIKSMVYCIWLLVEVVKSTIVVTRL IWQDNLQLNSCMLWLEFSELSEAEKVIYANSITLTPGTAVVDTTQDKILVHVLNVENAILDNTELYADFLKLKNRILKIR Q
Specific function: Unknown
COG id: COG1863
COG function: function code P; Multisubunit Na+/H+ antiporter, MnhE subunit
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18507; Mature: 18507
Theoretical pI: Translated: 6.94; Mature: 6.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLYAKLQHLVALLTAWIGLMGLGDVYHHPYLSLISIFITYFVSLYFKLFSITPVPIIKSM CHHHHHHHHHHHHHHHHHHHHCCHHHHCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH VYCIWLLVEVVKSTIVVTRLIWQDNLQLNSCMLWLEFSELSEAEKVIYANSITLTPGTAV HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHEEEEEHHHHHHHHHHHEECCEEECCCCEE VDTTQDKILVHVLNVENAILDNTELYADFLKLKNRILKIRQ EECCCCHHEEEEECCCHHHHCCHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MLYAKLQHLVALLTAWIGLMGLGDVYHHPYLSLISIFITYFVSLYFKLFSITPVPIIKSM CHHHHHHHHHHHHHHHHHHHHCCHHHHCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH VYCIWLLVEVVKSTIVVTRLIWQDNLQLNSCMLWLEFSELSEAEKVIYANSITLTPGTAV HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHEEEEEHHHHHHHHHHHEECCEEECCCCEE VDTTQDKILVHVLNVENAILDNTELYADFLKLKNRILKIRQ EECCCCHHEEEEECCCHHHHCCHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA