| Definition | Orientia tsutsugamushi str. Ikeda, complete genome. |
|---|---|
| Accession | NC_010793 |
| Length | 2,008,987 |
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The map label for this gene is 189184218
Identifier: 189184218
GI number: 189184218
Start: 1328136
End: 1328612
Strand: Reverse
Name: 189184218
Synonym: OTT_1311
Alternate gene names: NA
Gene position: 1328612-1328136 (Counterclockwise)
Preceding gene: 189184219
Following gene: 189184215
Centisome position: 66.13
GC content: 29.14
Gene sequence:
>477_bases GTGATAGCATGTTATCTCAAGCATAAAAACAATGGTTTAGAAGCTCTCAATCGTGATCTAACTACTAAGCTAAATCATGA ATATGATGAGTTGCCGAATTCTAATTTATCTAATAATCAGATTTATGATGAACCATTAGCTTCTACTTCTTCTTATCAGA CTAATATATCATTGATTCCTCCTATATATGCTATAATTCAAAAGAAAAACAAACTTTCTGATAATCAGATAGATAGTATT AACGGTAAAGCAAGTACTAACTCTACTACTGCTCTTTCTACCTTTGTTGAGAGTAATGATAATGATAGCGATAATACATA TGATGATATTGTGCATGATCAAGGAGGAAGTAGTAACAGCCACAATTATCCTAATAAAGAAAAAAATGAGGAACATTTTG AGTTACAAAAAAATCCTATTTATAATAAAGTAAATAACGATTTACTTGGAATTACTCTAGATCCAATTTACAGTTAA
Upstream 100 bases:
>100_bases TTTATTATATACATTGACAATTACAGTAAATCATATTATAAGCTTAAGCTTATAATAACAAGGTGATGATTTATGAATAT TAGCTGTAGCTATTCCTACA
Downstream 100 bases:
>100_bases ACTAGTATATTTTTTCTTTACTAACTTTTTTCTATTATTATGTAACTAGCGCTAAAATATGCAGCAGTATAAATATTTGA TATTTTTACCGTTTGAATTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 158; Mature: 158
Protein sequence:
>158_residues MIACYLKHKNNGLEALNRDLTTKLNHEYDELPNSNLSNNQIYDEPLASTSSYQTNISLIPPIYAIIQKKNKLSDNQIDSI NGKASTNSTTALSTFVESNDNDSDNTYDDIVHDQGGSSNSHNYPNKEKNEEHFELQKNPIYNKVNNDLLGITLDPIYS
Sequences:
>Translated_158_residues MIACYLKHKNNGLEALNRDLTTKLNHEYDELPNSNLSNNQIYDEPLASTSSYQTNISLIPPIYAIIQKKNKLSDNQIDSI NGKASTNSTTALSTFVESNDNDSDNTYDDIVHDQGGSSNSHNYPNKEKNEEHFELQKNPIYNKVNNDLLGITLDPIYS >Mature_158_residues MIACYLKHKNNGLEALNRDLTTKLNHEYDELPNSNLSNNQIYDEPLASTSSYQTNISLIPPIYAIIQKKNKLSDNQIDSI NGKASTNSTTALSTFVESNDNDSDNTYDDIVHDQGGSSNSHNYPNKEKNEEHFELQKNPIYNKVNNDLLGITLDPIYS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17781; Mature: 17781
Theoretical pI: Translated: 4.53; Mature: 4.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIACYLKHKNNGLEALNRDLTTKLNHEYDELPNSNLSNNQIYDEPLASTSSYQTNISLIP CEEEEEEECCCCHHHHHHHHHHHHCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEECH PIYAIIQKKNKLSDNQIDSINGKASTNSTTALSTFVESNDNDSDNTYDDIVHDQGGSSNS HHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHCCCCCCCC HNYPNKEKNEEHFELQKNPIYNKVNNDLLGITLDPIYS CCCCCCCCCCHHHEECCCCCCCCCCCCEEEEEECCCCC >Mature Secondary Structure MIACYLKHKNNGLEALNRDLTTKLNHEYDELPNSNLSNNQIYDEPLASTSSYQTNISLIP CEEEEEEECCCCHHHHHHHHHHHHCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEECH PIYAIIQKKNKLSDNQIDSINGKASTNSTTALSTFVESNDNDSDNTYDDIVHDQGGSSNS HHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHCCCCCCCC HNYPNKEKNEEHFELQKNPIYNKVNNDLLGITLDPIYS CCCCCCCCCCHHHEECCCCCCCCCCCCEEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA