| Definition | Orientia tsutsugamushi str. Ikeda, complete genome. |
|---|---|
| Accession | NC_010793 |
| Length | 2,008,987 |
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The map label for this gene is 189184190
Identifier: 189184190
GI number: 189184190
Start: 1304615
End: 1304803
Strand: Reverse
Name: 189184190
Synonym: OTT_1283
Alternate gene names: NA
Gene position: 1304803-1304615 (Counterclockwise)
Preceding gene: 189184191
Following gene: 189184187
Centisome position: 64.95
GC content: 28.04
Gene sequence:
>189_bases GTGTTTGGTGTAAAGATTGCAGAACAGGTTTTTGACCTTACCAGAATTAGGAATAATAAAAAAATCAGTTCTAGAGAAAT GATTAAAATATTGCGTCAGCAAAACAAAAAAGATTTGTTATTAATCAAATTATGCGACCGTTTACATAACATTCAAACCG TATTCATAAAATCTGATGAAAAAAGATAA
Upstream 100 bases:
>100_bases CACAGTAGCAGAATACAGCTTTGAAACTGATAGGATTATTACAGCAATACTACATGATACCATCGAAGATACAACATTAA CTAAAGAAAAAATTGCTAAG
Downstream 100 bases:
>100_bases AAAATCATCATTGAAACTGAGCAAGAATTTATACCTCTTGCTCGACACCTTAAACTATCAAAGATTGCTGATAAGTTAAG TGGATACTGTTTACTTAATA
Product: RelA/SpoT-related protein
Products: NA
Alternate protein names: SpoT-Like PpGpp Hydrolase; Guanosine Polyphosphate Pyrophosphohydrolase/Synthetase
Number of amino acids: Translated: 62; Mature: 62
Protein sequence:
>62_residues MFGVKIAEQVFDLTRIRNNKKISSREMIKILRQQNKKDLLLIKLCDRLHNIQTVFIKSDEKR
Sequences:
>Translated_62_residues MFGVKIAEQVFDLTRIRNNKKISSREMIKILRQQNKKDLLLIKLCDRLHNIQTVFIKSDEKR >Mature_62_residues MFGVKIAEQVFDLTRIRNNKKISSREMIKILRQQNKKDLLLIKLCDRLHNIQTVFIKSDEKR
Specific function: Unknown
COG id: COG0317
COG function: function code TK; Guanosine polyphosphate pyrophosphohydrolases/synthetases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 7456; Mature: 7456
Theoretical pI: Translated: 11.06; Mature: 11.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFGVKIAEQVFDLTRIRNNKKISSREMIKILRQQNKKDLLLIKLCDRLHNIQTVFIKSDE CCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHCCCEEEEEECCC KR CC >Mature Secondary Structure MFGVKIAEQVFDLTRIRNNKKISSREMIKILRQQNKKDLLLIKLCDRLHNIQTVFIKSDE CCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHCCCEEEEEECCC KR CC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA