| Definition | Orientia tsutsugamushi str. Ikeda, complete genome. |
|---|---|
| Accession | NC_010793 |
| Length | 2,008,987 |
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The map label for this gene is 189184187
Identifier: 189184187
GI number: 189184187
Start: 1302764
End: 1302994
Strand: Reverse
Name: 189184187
Synonym: OTT_1280
Alternate gene names: NA
Gene position: 1302994-1302764 (Counterclockwise)
Preceding gene: 189184190
Following gene: 189184186
Centisome position: 64.86
GC content: 35.93
Gene sequence:
>231_bases TTGCTTAGCACTAGTGGAGTTAGAGTCTTAAGAGGAAGAGCTGGTACAGGAAAATCTTATGTTTTAGCAAAAGCGTATGA GATTGCAACAAATCGTGGACAAAAAGTTATTGCTCTTGCTCCAACTCATAAGGCAGTATCAGAGCTGAAGAGCAAAGGTT ATACTGAGGTCTATACAGTAAAGGGATTTTTGTATAATCGAAAAAAAAAATTTTTATGCAAAGCAGCTTAA
Upstream 100 bases:
>100_bases CTTGACGAAAGCTATTCCATTTTAAGCCATGAAGGCGAATGTAGCACTTAGTGTCTTCATTCGGTTCAGAGGCAAATTTT AAAATCACAGCAGCTTTATT
Downstream 100 bases:
>100_bases TAGTAGTAGATGAAGCTGGAATGGTAGGTACTAAAGCTTATGCAGAGCTGTTTAGAGTAGTTAGAAACAATAATTGTCAA CTGATACTTGCTGGAGATGA
Product: putative conjugative transfer protein TraA
Products: NA
Alternate protein names: MobA/MobL Family Protein; Conjugal Transfer Protein TraA
Number of amino acids: Translated: 76; Mature: 76
Protein sequence:
>76_residues MLSTSGVRVLRGRAGTGKSYVLAKAYEIATNRGQKVIALAPTHKAVSELKSKGYTEVYTVKGFLYNRKKKFLCKAA
Sequences:
>Translated_76_residues MLSTSGVRVLRGRAGTGKSYVLAKAYEIATNRGQKVIALAPTHKAVSELKSKGYTEVYTVKGFLYNRKKKFLCKAA >Mature_76_residues MLSTSGVRVLRGRAGTGKSYVLAKAYEIATNRGQKVIALAPTHKAVSELKSKGYTEVYTVKGFLYNRKKKFLCKAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8325; Mature: 8325
Theoretical pI: Translated: 10.96; Mature: 10.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLSTSGVRVLRGRAGTGKSYVLAKAYEIATNRGQKVIALAPTHKAVSELKSKGYTEVYTV CCCCCCEEEEECCCCCCCCEEEHHHEEHHCCCCCEEEEECCCHHHHHHHHHCCCEEEEEE KGFLYNRKKKFLCKAA EEEEECCCCCEEEECC >Mature Secondary Structure MLSTSGVRVLRGRAGTGKSYVLAKAYEIATNRGQKVIALAPTHKAVSELKSKGYTEVYTV CCCCCCEEEEECCCCCCCCEEEHHHEEHHCCCCCEEEEECCCHHHHHHHHHCCCEEEEEE KGFLYNRKKKFLCKAA EEEEECCCCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA