| Definition | Orientia tsutsugamushi str. Ikeda, complete genome. |
|---|---|
| Accession | NC_010793 |
| Length | 2,008,987 |
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The map label for this gene is 189184164
Identifier: 189184164
GI number: 189184164
Start: 1286631
End: 1286903
Strand: Reverse
Name: 189184164
Synonym: OTT_1257
Alternate gene names: NA
Gene position: 1286903-1286631 (Counterclockwise)
Preceding gene: 189184170
Following gene: 189184162
Centisome position: 64.06
GC content: 26.74
Gene sequence:
>273_bases TTGCCTATAGAACATCTTATAATCAATAATAAAGGTGAAATAATGTCAGTTAAAATTACTAAAGGCAATAAAAGCTACCT ATCTATAGCTTCAGTTATTTCTAAAGGCTTATCTGGTAAATTGTTTGGTGATAAAGCTTACATATCTAAAGAGTTATTTC ATCAACTGCTGACCAATGGTCTACGTTTATTTACTAATCTTCGTAAAGATATGAAAACATATTTATTGGATATACAAGAT AATAGGTTATTAAATAAACGTTCTTTAATTTAG
Upstream 100 bases:
>100_bases CAAATTTTTATGCAAAAGGTTGACAAAAGGTTGACAAAAATCATTATGCCAAACCTATACAAATCTTCATACTTATACTA TCTGCCTTAGAAAGCCAATT
Downstream 100 bases:
>100_bases TCTGTCTTTAATGTACTAAAAAAACATATGCATTTAGAGCATACTAGACACCGTTCTCCTCTTAATTTCTTTGTTCATAT AAATTGCTTCTCTTGCTAGT
Product: transposase
Products: NA
Alternate protein names: Transposase And Inactivated Derivative; ISPg3 Transposase; Membrane-Associated Metal-Dependent Hydrolase; Transposase IS4 Family Protein
Number of amino acids: Translated: 90; Mature: 89
Protein sequence:
>90_residues MPIEHLIINNKGEIMSVKITKGNKSYLSIASVISKGLSGKLFGDKAYISKELFHQLLTNGLRLFTNLRKDMKTYLLDIQD NRLLNKRSLI
Sequences:
>Translated_90_residues MPIEHLIINNKGEIMSVKITKGNKSYLSIASVISKGLSGKLFGDKAYISKELFHQLLTNGLRLFTNLRKDMKTYLLDIQD NRLLNKRSLI >Mature_89_residues PIEHLIINNKGEIMSVKITKGNKSYLSIASVISKGLSGKLFGDKAYISKELFHQLLTNGLRLFTNLRKDMKTYLLDIQDN RLLNKRSLI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10264; Mature: 10133
Theoretical pI: Translated: 10.66; Mature: 10.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPIEHLIINNKGEIMSVKITKGNKSYLSIASVISKGLSGKLFGDKAYISKELFHQLLTNG CCCCEEEECCCCCEEEEEEECCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHH LRLFTNLRKDMKTYLLDIQDNRLLNKRSLI HHHHHHHHHHHHHHHHCCCCCCCCCCCCCC >Mature Secondary Structure PIEHLIINNKGEIMSVKITKGNKSYLSIASVISKGLSGKLFGDKAYISKELFHQLLTNG CCCEEEECCCCCEEEEEEECCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHH LRLFTNLRKDMKTYLLDIQDNRLLNKRSLI HHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA