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The map label for this gene is yfiH [C]

Identifier: 189184162

GI number: 189184162

Start: 1284673

End: 1285404

Strand: Reverse

Name: yfiH [C]

Synonym: OTT_1255

Alternate gene names: 189184162

Gene position: 1285404-1284673 (Counterclockwise)

Preceding gene: 189184164

Following gene: 189184161

Centisome position: 63.98

GC content: 29.78

Gene sequence:

>732_bases
ATGCAAAACTTAATACCTGACAATATATCCTATAAATTTTTTGATAAAAGTTTTATACAATCTAGCGGAGTATACTCACT
TTCACATCAGGATAATAAAACTATTAATTCTAAGCAAGTAGCAAATAATAGGCAGTTAGTTATCAATTATTTTTCAGCCA
AAGGTCTGATGATCTTAAATCAAAAACATGGCAATAGTGTATATTACGCTAAGGAGATTAACTGTATGCATGAACCTGTT
GCTGATGGTGTAGTTACTAATCTCTCGCAGTTAATACTGAGCATTCAAACAGCTGATTGTGTGCCAGTTCTATTGTTTGA
CAGAGATGGTACAACAATTGGAGCGGCTCATTGTGGTTGGCGAGGTACTAAAGCTAATATTCTAAAGAATGTTATTTACT
TAATGCGAAATTTAAATAATATGGTTAATATAAAAGCTATAATAGGACCGGCTATTCAACAAGCTTCTTATGAAGTTGAT
CAAAATTTGTATAGTGCTTTTATACAAGAAAATAGCGATTATCAATCTTTTTTTAAACCATTAGACTTTGATGGTAAATT
TTTATTTGATTTGGTAGGTCTTGTACAAGCAAAATTATTAGAAGAAAATATTGAGATAGTTAAAGTTTATCAAGATAATA
CTTACTTGTTACCAAAATTGTATCCAAGCTATAGACGTGATCGTCATATAAATTACCATATATTATCTACTATAGTGATC
AATAATGCTTAA

Upstream 100 bases:

>100_bases
CTTGTAATTAAAGTTTTGTGCTAATTTTTTTTGCAATTGCTCTAATGCGTTTACTTTTTTTAAATTATTTGATAGGCTTA
ATGGAAAATCGTTATTCTGC

Downstream 100 bases:

>100_bases
GTTACTTAATCCTAAAATTTTTTTACAGTTATCACGACAAATATTACCTTATTTGATAGTTATATTTGTAGCTATTTTTA
GCTATGGTATTTATTTAGCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 243; Mature: 243

Protein sequence:

>243_residues
MQNLIPDNISYKFFDKSFIQSSGVYSLSHQDNKTINSKQVANNRQLVINYFSAKGLMILNQKHGNSVYYAKEINCMHEPV
ADGVVTNLSQLILSIQTADCVPVLLFDRDGTTIGAAHCGWRGTKANILKNVIYLMRNLNNMVNIKAIIGPAIQQASYEVD
QNLYSAFIQENSDYQSFFKPLDFDGKFLFDLVGLVQAKLLEENIEIVKVYQDNTYLLPKLYPSYRRDRHINYHILSTIVI
NNA

Sequences:

>Translated_243_residues
MQNLIPDNISYKFFDKSFIQSSGVYSLSHQDNKTINSKQVANNRQLVINYFSAKGLMILNQKHGNSVYYAKEINCMHEPV
ADGVVTNLSQLILSIQTADCVPVLLFDRDGTTIGAAHCGWRGTKANILKNVIYLMRNLNNMVNIKAIIGPAIQQASYEVD
QNLYSAFIQENSDYQSFFKPLDFDGKFLFDLVGLVQAKLLEENIEIVKVYQDNTYLLPKLYPSYRRDRHINYHILSTIVI
NNA
>Mature_243_residues
MQNLIPDNISYKFFDKSFIQSSGVYSLSHQDNKTINSKQVANNRQLVINYFSAKGLMILNQKHGNSVYYAKEINCMHEPV
ADGVVTNLSQLILSIQTADCVPVLLFDRDGTTIGAAHCGWRGTKANILKNVIYLMRNLNNMVNIKAIIGPAIQQASYEVD
QNLYSAFIQENSDYQSFFKPLDFDGKFLFDLVGLVQAKLLEENIEIVKVYQDNTYLLPKLYPSYRRDRHINYHILSTIVI
NNA

Specific function: Unknown

COG id: COG1496

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0124 family [H]

Homologues:

Organism=Escherichia coli, GI1788945, Length=201, Percent_Identity=30.8457711442786, Blast_Score=89, Evalue=3e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003730
- InterPro:   IPR011324 [H]

Pfam domain/function: PF02578 Cu-oxidase_4 [H]

EC number: NA

Molecular weight: Translated: 27683; Mature: 27683

Theoretical pI: Translated: 8.05; Mature: 8.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQNLIPDNISYKFFDKSFIQSSGVYSLSHQDNKTINSKQVANNRQLVINYFSAKGLMILN
CCCCCCCCCCEEEHHHHHHHCCCEEEECCCCCCCCCHHHHCCCCEEEEEEECCCCEEEEE
QKHGNSVYYAKEINCMHEPVADGVVTNLSQLILSIQTADCVPVLLFDRDGTTIGAAHCGW
ECCCCEEEEEEECCHHHCHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCEEECCCCCC
RGTKANILKNVIYLMRNLNNMVNIKAIIGPAIQQASYEVDQNLYSAFIQENSDYQSFFKP
CCCHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCC
LDFDGKFLFDLVGLVQAKLLEENIEIVKVYQDNTYLLPKLYPSYRRDRHINYHILSTIVI
CCCCCHHHHHHHHHHHHHHHHCCCEEEEEEECCEEECCCCCCCHHHCCCCCEEEEEEEEE
NNA
ECC
>Mature Secondary Structure
MQNLIPDNISYKFFDKSFIQSSGVYSLSHQDNKTINSKQVANNRQLVINYFSAKGLMILN
CCCCCCCCCCEEEHHHHHHHCCCEEEECCCCCCCCCHHHHCCCCEEEEEEECCCCEEEEE
QKHGNSVYYAKEINCMHEPVADGVVTNLSQLILSIQTADCVPVLLFDRDGTTIGAAHCGW
ECCCCEEEEEEECCHHHCHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCEEECCCCCC
RGTKANILKNVIYLMRNLNNMVNIKAIIGPAIQQASYEVDQNLYSAFIQENSDYQSFFKP
CCCHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCC
LDFDGKFLFDLVGLVQAKLLEENIEIVKVYQDNTYLLPKLYPSYRRDRHINYHILSTIVI
CCCCCHHHHHHHHHHHHHHHHCCCEEEEEEECCEEECCCCCCCHHHCCCCCEEEEEEEEE
NNA
ECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11557893 [H]