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The map label for this gene is ccmC [H]

Identifier: 189184161

GI number: 189184161

Start: 1283970

End: 1284680

Strand: Reverse

Name: ccmC [H]

Synonym: OTT_1254

Alternate gene names: 189184161

Gene position: 1284680-1283970 (Counterclockwise)

Preceding gene: 189184162

Following gene: 189184160

Centisome position: 63.95

GC content: 30.24

Gene sequence:

>711_bases
ATGCTTAAGTTACTTAATCCTAAAATTTTTTTACAGTTATCACGACAAATATTACCTTATTTGATAGTTATATTTGTAGC
TATTTTTAGCTATGGTATTTATTTAGCGCTTTTTAATTCTCCAATTGATTATCAGCAGGGAGAGTTAGTAAGAATAATGT
ATATACATGTTCCATCAGCATGGTTAGCAGTAATGATATATGTTATAATGGCTATATGCAGCTTTGGATCAATAGTTTGG
AAGATTAGGATGTTATATATAATTGCTATATCAGCAGCTCCTATCGGTTGTTGTTTTACAGCAATTACGTTGATTACCGG
CTCAATTTGGGGAAAAGTAACTTGGGGTACTTGGTGGGTATGGGATGCTAGATTAACATCAACGCTAGTATTGTTATTAT
TATATCTAAGTTATATTATAGTAGTAAATGCTGGAGATAATATATTACGCTGTGAAAAGCCAGCTGCAGTAACTTCTCTA
ATTGGAGTTATTAATATACCTATCGTTAAATTTTCAGTTGACATTTGGAGCACGCTACATCAACAATCTAGCGTTCTAAA
AATCGGAGGACCAGCTATTCATATTTCAATGTTAAAACCTCTGATAGTAATGTTCTTAGCATTTGTAATTTATTTTATTA
TTGTAATTATTTGTAGAGTAAATATACTATTTATTCGATTAAAGTTATTTAATTCTATGAGCTTTAGGTAA

Upstream 100 bases:

>100_bases
GTTTATCAAGATAATACTTACTTGTTACCAAAATTGTATCCAAGCTATAGACGTGATCGTCATATAAATTACCATATATT
ATCTACTATAGTGATCAATA

Downstream 100 bases:

>100_bases
TAGTTATGACTTACGTTGTTACAGATTCTTGTGTAAAATGCAAGTATACTGATTGTGTAGAAGTCTGTCCTGTAGACTGC
TTTCATGAAGGAGAAATGAT

Product: heme exporter protein C

Products: NA

Alternate protein names: Cytochrome c-type biogenesis protein CycZ [H]

Number of amino acids: Translated: 236; Mature: 236

Protein sequence:

>236_residues
MLKLLNPKIFLQLSRQILPYLIVIFVAIFSYGIYLALFNSPIDYQQGELVRIMYIHVPSAWLAVMIYVIMAICSFGSIVW
KIRMLYIIAISAAPIGCCFTAITLITGSIWGKVTWGTWWVWDARLTSTLVLLLLYLSYIIVVNAGDNILRCEKPAAVTSL
IGVINIPIVKFSVDIWSTLHQQSSVLKIGGPAIHISMLKPLIVMFLAFVIYFIIVIICRVNILFIRLKLFNSMSFR

Sequences:

>Translated_236_residues
MLKLLNPKIFLQLSRQILPYLIVIFVAIFSYGIYLALFNSPIDYQQGELVRIMYIHVPSAWLAVMIYVIMAICSFGSIVW
KIRMLYIIAISAAPIGCCFTAITLITGSIWGKVTWGTWWVWDARLTSTLVLLLLYLSYIIVVNAGDNILRCEKPAAVTSL
IGVINIPIVKFSVDIWSTLHQQSSVLKIGGPAIHISMLKPLIVMFLAFVIYFIIVIICRVNILFIRLKLFNSMSFR
>Mature_236_residues
MLKLLNPKIFLQLSRQILPYLIVIFVAIFSYGIYLALFNSPIDYQQGELVRIMYIHVPSAWLAVMIYVIMAICSFGSIVW
KIRMLYIIAISAAPIGCCFTAITLITGSIWGKVTWGTWWVWDARLTSTLVLLLLYLSYIIVVNAGDNILRCEKPAAVTSL
IGVINIPIVKFSVDIWSTLHQQSSVLKIGGPAIHISMLKPLIVMFLAFVIYFIIVIICRVNILFIRLKLFNSMSFR

Specific function: Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes [H]

COG id: COG0755

COG function: function code O; ABC-type transport system involved in cytochrome c biogenesis, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CcmC/CycZ/HelC family [H]

Homologues:

Organism=Escherichia coli, GI1788527, Length=226, Percent_Identity=38.4955752212389, Blast_Score=161, Evalue=4e-41,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002541
- InterPro:   IPR003557 [H]

Pfam domain/function: PF01578 Cytochrom_C_asm [H]

EC number: NA

Molecular weight: Translated: 26767; Mature: 26767

Theoretical pI: Translated: 9.94; Mature: 9.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKLLNPKIFLQLSRQILPYLIVIFVAIFSYGIYLALFNSPIDYQQGELVRIMYIHVPSA
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEECCHH
WLAVMIYVIMAICSFGSIVWKIRMLYIIAISAAPIGCCFTAITLITGSIWGKVTWGTWWV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCEEECCEEEE
WDARLTSTLVLLLLYLSYIIVVNAGDNILRCEKPAAVTSLIGVINIPIVKFSVDIWSTLH
EHHHHHHHHHHHHHHHHHHEEECCCCCEEECCCCHHHHHHHHHHHCCHHEEEHHHHHHHH
QQSSVLKIGGPAIHISMLKPLIVMFLAFVIYFIIVIICRVNILFIRLKLFNSMSFR
HCCCEEEECCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MLKLLNPKIFLQLSRQILPYLIVIFVAIFSYGIYLALFNSPIDYQQGELVRIMYIHVPSA
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEECCHH
WLAVMIYVIMAICSFGSIVWKIRMLYIIAISAAPIGCCFTAITLITGSIWGKVTWGTWWV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCEEECCEEEE
WDARLTSTLVLLLLYLSYIIVVNAGDNILRCEKPAAVTSLIGVINIPIVKFSVDIWSTLH
EHHHHHHHHHHHHHHHHHHEEECCCCCEEECCCCHHHHHHHHHHHCCHHEEEHHHHHHHH
QQSSVLKIGGPAIHISMLKPLIVMFLAFVIYFIIVIICRVNILFIRLKLFNSMSFR
HCCCEEEECCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1850420; 12597275 [H]