| Definition | Orientia tsutsugamushi str. Ikeda, complete genome. |
|---|---|
| Accession | NC_010793 |
| Length | 2,008,987 |
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The map label for this gene is 189184158
Identifier: 189184158
GI number: 189184158
Start: 1282035
End: 1282562
Strand: Reverse
Name: 189184158
Synonym: OTT_1251
Alternate gene names: NA
Gene position: 1282562-1282035 (Counterclockwise)
Preceding gene: 189184159
Following gene: 189184157
Centisome position: 63.84
GC content: 27.46
Gene sequence:
>528_bases ATGAAAAAAATCAATTACGAAGAACTTATTGATCAATCAATGTTAAATGTTGTTAAACAAGCTCTTAAGTTTGCTTCTAC TAACTGCAATTTTGAAGATAATTATTTTTATATATCATTTTGTACAACATTTCCAGGTGTAAAAATATCTGAACACTTAA GAGTTAAGTATTTAGAACAAATGACTATTGTGTTACAACATCAGTTTTCAGATTTAGTAATTGAGAGTGATTTTTTTTCA GTTTGTCTAAGTTTTAGTGGTAAAATTGAAAAAATTGTTGTTCCATGGAAATCAATAATTATGTTTATTGATCCAGAAGC GCAGCTAAGAATCAAGCTGTTTTATTATGTAAATAAGTATAAGCAGCAGCTTTATAAAAATGTAGATGGTATTGTTGAGG ACAGTAACAAAGAAAATAAAAATCAATATTGCGATCAGTTAGTAGCCACAAATGAAAAGTTGAAAAATATGAAAGACATA GTAGGAAATAAAGTTGTTAGTCTCGACAGCTTTAGGAAGAAAATCTAG
Upstream 100 bases:
>100_bases TTATGGACATTTGATAAGTGTTACTCTATAATAATATGATTCATAAGTCTGATAAGTAAATTTAAATAAGATATTAAACT TAGAGTCTTGGTAAATAACA
Downstream 100 bases:
>100_bases TGATTGACTATGCTTGCTCTGCTACTAATAACATTCCAGTTAAGATATATACAGATGGTGCGTGCAGCGGTAATCCAGGA CCAGGAGGTTGGGGTGTATA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 175; Mature: 175
Protein sequence:
>175_residues MKKINYEELIDQSMLNVVKQALKFASTNCNFEDNYFYISFCTTFPGVKISEHLRVKYLEQMTIVLQHQFSDLVIESDFFS VCLSFSGKIEKIVVPWKSIIMFIDPEAQLRIKLFYYVNKYKQQLYKNVDGIVEDSNKENKNQYCDQLVATNEKLKNMKDI VGNKVVSLDSFRKKI
Sequences:
>Translated_175_residues MKKINYEELIDQSMLNVVKQALKFASTNCNFEDNYFYISFCTTFPGVKISEHLRVKYLEQMTIVLQHQFSDLVIESDFFS VCLSFSGKIEKIVVPWKSIIMFIDPEAQLRIKLFYYVNKYKQQLYKNVDGIVEDSNKENKNQYCDQLVATNEKLKNMKDI VGNKVVSLDSFRKKI >Mature_175_residues MKKINYEELIDQSMLNVVKQALKFASTNCNFEDNYFYISFCTTFPGVKISEHLRVKYLEQMTIVLQHQFSDLVIESDFFS VCLSFSGKIEKIVVPWKSIIMFIDPEAQLRIKLFYYVNKYKQQLYKNVDGIVEDSNKENKNQYCDQLVATNEKLKNMKDI VGNKVVSLDSFRKKI
Specific function: Unknown
COG id: COG3814
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20587; Mature: 20587
Theoretical pI: Translated: 8.57; Mature: 8.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKINYEELIDQSMLNVVKQALKFASTNCNFEDNYFYISFCTTFPGVKISEHLRVKYLEQ CCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHH MTIVLQHQFSDLVIESDFFSVCLSFSGKIEKIVVPWKSIIMFIDPEAQLRIKLFYYVNKY HHHHHHHHHHHHEEHHHHHHHHHHCCCCEEEEEECHHHEEEEECCCCCEEEHHHHHHHHH KQQLYKNVDGIVEDSNKENKNQYCDQLVATNEKLKNMKDIVGNKVVSLDSFRKKI HHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEECHHHHHHCC >Mature Secondary Structure MKKINYEELIDQSMLNVVKQALKFASTNCNFEDNYFYISFCTTFPGVKISEHLRVKYLEQ CCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHH MTIVLQHQFSDLVIESDFFSVCLSFSGKIEKIVVPWKSIIMFIDPEAQLRIKLFYYVNKY HHHHHHHHHHHHEEHHHHHHHHHHCCCCEEEEEECHHHEEEEECCCCCEEEHHHHHHHHH KQQLYKNVDGIVEDSNKENKNQYCDQLVATNEKLKNMKDIVGNKVVSLDSFRKKI HHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEECHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA