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The map label for this gene is recO [H]

Identifier: 189184083

GI number: 189184083

Start: 1202951

End: 1203676

Strand: Direct

Name: recO [H]

Synonym: OTT_1176

Alternate gene names: 189184083

Gene position: 1202951-1203676 (Clockwise)

Preceding gene: 189184082

Following gene: 189184084

Centisome position: 59.88

GC content: 26.45

Gene sequence:

>726_bases
ATGAATTTTAGAGACAAAGCAATAATTCTAAAAAAAAGAAATATCAAAGAAAATTTAGCAATTGTAACAGTATTAACTCA
ATCATATGGAATTTATTCTGGAATTATAAAAGATTTACATAGTAAAAAAAATACAATCATATACCAAATAGGTAATATAG
TAGATTTTTGCTGGAGTGCACGCTTAGATGAGCATTTAGGTACTATAAACTGTGAGCTAGTAAAATCTTACTCCTATTTG
ATTATGTCTAATAAACGTAATCTACTTTATACTCACAGCTTAATTGAATTAACTTTAATGTCATTTAAAGAAAGAGAGTT
ACACGCTAATTTATTTGAAAAATGGTTGGAAAATCTTGAATCAATAAATACTGGCAATATTAACGTTAAAAATTATATTA
ATTTTGAGCTTTTAATTTTAAAAGAGGCAGGATATCGACTCAACTTAGACAGGTGTGGTGTTACTAACTGTACACAAAAT
TTAATTTATGTTTCACCTAAGTCAGGGCAGGCTATATCTGCAACTGTTGGAGAGCCATATAAGCACAAATTGTTATTATT
ACCTAAATTTTTAGTTCATAATAATTGCGAACCAGAGGATATTTATGAAATTCAAGCTGCATTTAACTTAACAGCGTATT
TTTTTAATAAGTATATACTCATAAAAAAAAAATTACCAATTACTAGAGAGCTATTATTAAAAAGTATACTGGAATATAGT
TTTTAA

Upstream 100 bases:

>100_bases
GGGAGAAAGGTAGAAAAGCCCCAAATTGGGTAAAAATATAATTTTATAATTTTTTTATTAAACTTGATTTCTATAAGTTG
ATTATTTACTAATTTTTTTT

Downstream 100 bases:

>100_bases
ACGTGGATTTTTTATGACAACTTCATTAATTAATGTTTAAATATTCTTGAATTTTTGATTTACATAAGCCGGTATCAGTA
CTGTATGATATACGTTATCT

Product: DNA repair protein RecO

Products: NA

Alternate protein names: Recombination protein O [H]

Number of amino acids: Translated: 241; Mature: 241

Protein sequence:

>241_residues
MNFRDKAIILKKRNIKENLAIVTVLTQSYGIYSGIIKDLHSKKNTIIYQIGNIVDFCWSARLDEHLGTINCELVKSYSYL
IMSNKRNLLYTHSLIELTLMSFKERELHANLFEKWLENLESINTGNINVKNYINFELLILKEAGYRLNLDRCGVTNCTQN
LIYVSPKSGQAISATVGEPYKHKLLLLPKFLVHNNCEPEDIYEIQAAFNLTAYFFNKYILIKKKLPITRELLLKSILEYS
F

Sequences:

>Translated_241_residues
MNFRDKAIILKKRNIKENLAIVTVLTQSYGIYSGIIKDLHSKKNTIIYQIGNIVDFCWSARLDEHLGTINCELVKSYSYL
IMSNKRNLLYTHSLIELTLMSFKERELHANLFEKWLENLESINTGNINVKNYINFELLILKEAGYRLNLDRCGVTNCTQN
LIYVSPKSGQAISATVGEPYKHKLLLLPKFLVHNNCEPEDIYEIQAAFNLTAYFFNKYILIKKKLPITRELLLKSILEYS
F
>Mature_241_residues
MNFRDKAIILKKRNIKENLAIVTVLTQSYGIYSGIIKDLHSKKNTIIYQIGNIVDFCWSARLDEHLGTINCELVKSYSYL
IMSNKRNLLYTHSLIELTLMSFKERELHANLFEKWLENLESINTGNINVKNYINFELLILKEAGYRLNLDRCGVTNCTQN
LIYVSPKSGQAISATVGEPYKHKLLLLPKFLVHNNCEPEDIYEIQAAFNLTAYFFNKYILIKKKLPITRELLLKSILEYS
F

Specific function: Involved in DNA repair and recF pathway recombination [H]

COG id: COG1381

COG function: function code L; Recombinational DNA repair protein (RecF pathway)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the recO family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001164
- InterPro:   IPR022572
- InterPro:   IPR016027
- InterPro:   IPR003717 [H]

Pfam domain/function: PF02565 RecO; PF11967 RecO_N [H]

EC number: NA

Molecular weight: Translated: 28009; Mature: 28009

Theoretical pI: Translated: 9.19; Mature: 9.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNFRDKAIILKKRNIKENLAIVTVLTQSYGIYSGIIKDLHSKKNTIIYQIGNIVDFCWSA
CCCCCCEEEEECCCCCCCEEEEEEEECCCCHHHHHHHHHHCCCCEEEEEHHHHHHHHHHH
RLDEHLGTINCELVKSYSYLIMSNKRNLLYTHSLIELTLMSFKERELHANLFEKWLENLE
HHHHHCCCEEEEEECCEEEEEEECCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SINTGNINVKNYINFELLILKEAGYRLNLDRCGVTNCTQNLIYVSPKSGQAISATVGEPY
CCCCCCEEEEEEEEEEEEEEECCCCEEECCCCCCCCCCCCEEEEECCCCCEEEECCCCCC
KHKLLLLPKFLVHNNCEPEDIYEIQAAFNLTAYFFNKYILIKKKLPITRELLLKSILEYS
CCEEEEEEHHHHCCCCCHHHHHHHHHHHHHHHHHHCEEEEEEECCCHHHHHHHHHHHHHC
F
C
>Mature Secondary Structure
MNFRDKAIILKKRNIKENLAIVTVLTQSYGIYSGIIKDLHSKKNTIIYQIGNIVDFCWSA
CCCCCCEEEEECCCCCCCEEEEEEEECCCCHHHHHHHHHHCCCCEEEEEHHHHHHHHHHH
RLDEHLGTINCELVKSYSYLIMSNKRNLLYTHSLIELTLMSFKERELHANLFEKWLENLE
HHHHHCCCEEEEEECCEEEEEEECCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SINTGNINVKNYINFELLILKEAGYRLNLDRCGVTNCTQNLIYVSPKSGQAISATVGEPY
CCCCCCEEEEEEEEEEEEEEECCCCEEECCCCCCCCCCCCEEEEECCCCCEEEECCCCCC
KHKLLLLPKFLVHNNCEPEDIYEIQAAFNLTAYFFNKYILIKKKLPITRELLLKSILEYS
CCEEEEEEHHHHCCCCCHHHHHHHHHHHHHHHHHHCEEEEEEECCCHHHHHHHHHHHHHC
F
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA