| Definition | Orientia tsutsugamushi str. Ikeda, complete genome. |
|---|---|
| Accession | NC_010793 |
| Length | 2,008,987 |
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The map label for this gene is 189184082
Identifier: 189184082
GI number: 189184082
Start: 1202379
End: 1202891
Strand: Direct
Name: 189184082
Synonym: OTT_1175
Alternate gene names: NA
Gene position: 1202379-1202891 (Clockwise)
Preceding gene: 189184081
Following gene: 189184083
Centisome position: 59.85
GC content: 32.55
Gene sequence:
>513_bases ATGAACATTTTTGTCTTACATCAAGACCCCAATATTGCAGCCCAAATGCTTTGTGATAAGCATATAGTAAAGATGCCACT AGAAACTGCTCAGCTATTGTGCAGTGTATTTTTAGTAGCATTAAATAATTCTGATTCTATAGTTAGGACTAAAAGCTATA CCATTACAGTCCCATATAAGCTTACTCACTGCAATCACCCATGTTCTATATGGGCTAGAATATCTCAAGGAAATTTTGAT TGGTTAATAAAGCATGGACAGGCTTTATGCAAAGAATATACTTACCGGTATAAAAAAGAGCATAAGTCAGAAAATGTAAT AAATTGGTGCGACAATAATAAAGATATTCTGCTTTTTCAAACAGATTGTATACAAAATTTCGCACAAGCATTGCCAGAAC AATATAAATGTAGTGATGCTATTAAAGCTTATAGAGAATATTATTTACATGAGAAGTTAAGGTTTGCAAGATGGGAGAAA GGTAGAAAAGCCCCAAATTGGGTAAAAATATAA
Upstream 100 bases:
>100_bases CTAACAGATAAGGCAATGTTAGTTTATAACTATATAGTTAATAAAATAGTTATTGGATAGGTATTTAGTTGCAGAGTAGC AAATAAAATAAAAAGATATA
Downstream 100 bases:
>100_bases TTTTATAATTTTTTTATTAAACTTGATTTCTATAAGTTGATTATTTACTAATTTTTTTTATGAATTTTAGAGACAAAGCA ATAATTCTAAAAAAAAGAAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 170; Mature: 170
Protein sequence:
>170_residues MNIFVLHQDPNIAAQMLCDKHIVKMPLETAQLLCSVFLVALNNSDSIVRTKSYTITVPYKLTHCNHPCSIWARISQGNFD WLIKHGQALCKEYTYRYKKEHKSENVINWCDNNKDILLFQTDCIQNFAQALPEQYKCSDAIKAYREYYLHEKLRFARWEK GRKAPNWVKI
Sequences:
>Translated_170_residues MNIFVLHQDPNIAAQMLCDKHIVKMPLETAQLLCSVFLVALNNSDSIVRTKSYTITVPYKLTHCNHPCSIWARISQGNFD WLIKHGQALCKEYTYRYKKEHKSENVINWCDNNKDILLFQTDCIQNFAQALPEQYKCSDAIKAYREYYLHEKLRFARWEK GRKAPNWVKI >Mature_170_residues MNIFVLHQDPNIAAQMLCDKHIVKMPLETAQLLCSVFLVALNNSDSIVRTKSYTITVPYKLTHCNHPCSIWARISQGNFD WLIKHGQALCKEYTYRYKKEHKSENVINWCDNNKDILLFQTDCIQNFAQALPEQYKCSDAIKAYREYYLHEKLRFARWEK GRKAPNWVKI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20072; Mature: 20072
Theoretical pI: Translated: 8.88; Mature: 8.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.7 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 6.5 %Cys+Met (Translated Protein) 4.7 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 6.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNIFVLHQDPNIAAQMLCDKHIVKMPLETAQLLCSVFLVALNNSDSIVRTKSYTITVPYK CEEEEEECCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCEEEEEEEEEEEEEE LTHCNHPCSIWARISQGNFDWLIKHGQALCKEYTYRYKKEHKSENVINWCDNNKDILLFQ EECCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCEEEEE TDCIQNFAQALPEQYKCSDAIKAYREYYLHEKLRFARWEKGRKAPNWVKI HHHHHHHHHHCCHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure MNIFVLHQDPNIAAQMLCDKHIVKMPLETAQLLCSVFLVALNNSDSIVRTKSYTITVPYK CEEEEEECCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCEEEEEEEEEEEEEE LTHCNHPCSIWARISQGNFDWLIKHGQALCKEYTYRYKKEHKSENVINWCDNNKDILLFQ EECCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCEEEEE TDCIQNFAQALPEQYKCSDAIKAYREYYLHEKLRFARWEKGRKAPNWVKI HHHHHHHHHHCCHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA