| Definition | Orientia tsutsugamushi str. Ikeda, complete genome. |
|---|---|
| Accession | NC_010793 |
| Length | 2,008,987 |
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The map label for this gene is aatA [H]
Identifier: 189184077
GI number: 189184077
Start: 1197282
End: 1198484
Strand: Reverse
Name: aatA [H]
Synonym: OTT_1170
Alternate gene names: 189184077
Gene position: 1198484-1197282 (Counterclockwise)
Preceding gene: 189184086
Following gene: 189184073
Centisome position: 59.66
GC content: 32.0
Gene sequence:
>1203_bases ATGTCACTTATTACTCATAGAATCAATCGTATAAAAAGTTCTCCAACATTGGCAGTTGCAAAAAAGGCAGCTGAACTTCA GCAACAAGGCAAAAATATAATTTCCTTAAGTGTAGGCGAGTTAAATTTTGATACTCATGATAACATTAAAGCTCAAGCTA TTGAAGCTATAAATCGCGGTATGACAAAATACACTAATGTTGATGGTATGCCAGAATTAAAACAAGCAGTAAAAAACAAG TTTAAGGTTGAAAATAATCTTGATTATCAACTAGATGAGCTAATAGTTAGCTCTGGAGCTAAGCAAGTTATTTTTAATGC TCTATTAGCTACTTTGGATATAGGAGATGAAGTTATTATTCCAACACCATACTGGGTGTCATATCCTGATATTGTATCTC TAACTGGCGCTACTAGTAAATTTATTTATTGTCATGAAAGCTCTAATTTTAAAATTACTCCAGCACAACTTAGTAATGCG ATTACTGATAAAACTAAGTGGCTATTACTAAATTCACCTAATAATCCTACTGGCGCCATTTATACAATTGAAGAGTTAAA ATTATTAGCAGAAATACTTAGCATACATAAAAATATACACATAATGTGTGATGATATTTATGAGCATATTATATTTGATA ACAATAAATTTTATACTTTAGCAGCTATAGCTCCAAGTTTAAAGGAAAGAATATTTATTGTTAATGGAGTTTCAAAGGCA TATGCAATGACTGGATGGCGCATTGGTTATGGAGCTGGCAATAGCGAAATTATTAAAGCAATGATTAAAATTCAGTCTCA TAGTACTTCTAATCCTTGTTCTATTAGCCAAGTTGCAGCAATTGAAGCATTAACAGGCAGTCAGAGTCATATTCAAGATA ATATTACAATTTTACAAAGAAACCGAGATTTAGCCTTTAATATTCTCAATAATACCATTGGGCTTAAGTGCTATAAACCA ACAGGAACATTTTATCTTTTTGTTTCTTGTCAAGAACTGTTACATAAAGCTACCTCTACTGGTCAAAAAATAAACACAAG TAATGACTTTGCTTGCTACTTACTCGAAGAGGCAGAAGTATCAGTAGTACCTGGTGAAGCTTTTGGTATAAATGGATACT TTAGATTATCTTATGCAGTAGATGCAGCAGAACTAAATATTGCATGTCTGCAAATCAAAAAAGCTTGCGAAAAGCTGATA TAG
Upstream 100 bases:
>100_bases TTTGATTTAAATAATGTATACTTAATATAATAATTATATTTGGTAGCATATGTAATTTAATAATTTATAGCTTTAAATAT TACAATTATGTAGTTAATTT
Downstream 100 bases:
>100_bases TAAGTTTGTCATATAATTTACATAAGTAGACAAAACAGAATCTACAAAATCTTAACTTGATATTGTGAAGTATTCCAAGA ACTATATGCCTACAAATATA
Product: aspartate aminotransferase
Products: NA
Alternate protein names: AspAT; Transaminase A [H]
Number of amino acids: Translated: 400; Mature: 399
Protein sequence:
>400_residues MSLITHRINRIKSSPTLAVAKKAAELQQQGKNIISLSVGELNFDTHDNIKAQAIEAINRGMTKYTNVDGMPELKQAVKNK FKVENNLDYQLDELIVSSGAKQVIFNALLATLDIGDEVIIPTPYWVSYPDIVSLTGATSKFIYCHESSNFKITPAQLSNA ITDKTKWLLLNSPNNPTGAIYTIEELKLLAEILSIHKNIHIMCDDIYEHIIFDNNKFYTLAAIAPSLKERIFIVNGVSKA YAMTGWRIGYGAGNSEIIKAMIKIQSHSTSNPCSISQVAAIEALTGSQSHIQDNITILQRNRDLAFNILNNTIGLKCYKP TGTFYLFVSCQELLHKATSTGQKINTSNDFACYLLEEAEVSVVPGEAFGINGYFRLSYAVDAAELNIACLQIKKACEKLI
Sequences:
>Translated_400_residues MSLITHRINRIKSSPTLAVAKKAAELQQQGKNIISLSVGELNFDTHDNIKAQAIEAINRGMTKYTNVDGMPELKQAVKNK FKVENNLDYQLDELIVSSGAKQVIFNALLATLDIGDEVIIPTPYWVSYPDIVSLTGATSKFIYCHESSNFKITPAQLSNA ITDKTKWLLLNSPNNPTGAIYTIEELKLLAEILSIHKNIHIMCDDIYEHIIFDNNKFYTLAAIAPSLKERIFIVNGVSKA YAMTGWRIGYGAGNSEIIKAMIKIQSHSTSNPCSISQVAAIEALTGSQSHIQDNITILQRNRDLAFNILNNTIGLKCYKP TGTFYLFVSCQELLHKATSTGQKINTSNDFACYLLEEAEVSVVPGEAFGINGYFRLSYAVDAAELNIACLQIKKACEKLI >Mature_399_residues SLITHRINRIKSSPTLAVAKKAAELQQQGKNIISLSVGELNFDTHDNIKAQAIEAINRGMTKYTNVDGMPELKQAVKNKF KVENNLDYQLDELIVSSGAKQVIFNALLATLDIGDEVIIPTPYWVSYPDIVSLTGATSKFIYCHESSNFKITPAQLSNAI TDKTKWLLLNSPNNPTGAIYTIEELKLLAEILSIHKNIHIMCDDIYEHIIFDNNKFYTLAAIAPSLKERIFIVNGVSKAY AMTGWRIGYGAGNSEIIKAMIKIQSHSTSNPCSISQVAAIEALTGSQSHIQDNITILQRNRDLAFNILNNTIGLKCYKPT GTFYLFVSCQELLHKATSTGQKINTSNDFACYLLEEAEVSVVPGEAFGINGYFRLSYAVDAAELNIACLQIKKACEKLI
Specific function: Unknown
COG id: COG0436
COG function: function code E; Aspartate/tyrosine/aromatic aminotransferase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-I pyridoxal-phosphate-dependent aminotransferase family [H]
Homologues:
Organism=Homo sapiens, GI95147551, Length=427, Percent_Identity=24.5901639344262, Blast_Score=142, Evalue=6e-34, Organism=Homo sapiens, GI169881279, Length=427, Percent_Identity=24.5901639344262, Blast_Score=142, Evalue=6e-34, Organism=Homo sapiens, GI56713256, Length=377, Percent_Identity=25.9946949602122, Blast_Score=129, Evalue=4e-30, Organism=Homo sapiens, GI56713254, Length=377, Percent_Identity=25.9946949602122, Blast_Score=129, Evalue=4e-30, Organism=Homo sapiens, GI169881281, Length=303, Percent_Identity=24.0924092409241, Blast_Score=113, Evalue=3e-25, Organism=Homo sapiens, GI4507369, Length=382, Percent_Identity=24.3455497382199, Blast_Score=113, Evalue=3e-25, Organism=Escherichia coli, GI1788627, Length=363, Percent_Identity=27.5482093663912, Blast_Score=141, Evalue=6e-35, Organism=Escherichia coli, GI1786816, Length=373, Percent_Identity=25.201072386059, Blast_Score=134, Evalue=1e-32, Organism=Escherichia coli, GI1788722, Length=391, Percent_Identity=28.6445012787724, Blast_Score=131, Evalue=8e-32, Organism=Caenorhabditis elegans, GI17567663, Length=397, Percent_Identity=23.4256926952141, Blast_Score=127, Evalue=1e-29, Organism=Caenorhabditis elegans, GI71994476, Length=328, Percent_Identity=25, Blast_Score=108, Evalue=6e-24, Organism=Caenorhabditis elegans, GI71994472, Length=328, Percent_Identity=25, Blast_Score=108, Evalue=7e-24, Organism=Caenorhabditis elegans, GI17567369, Length=297, Percent_Identity=23.2323232323232, Blast_Score=93, Evalue=3e-19, Organism=Caenorhabditis elegans, GI71981209, Length=308, Percent_Identity=22.7272727272727, Blast_Score=65, Evalue=6e-11, Organism=Saccharomyces cerevisiae, GI6322401, Length=389, Percent_Identity=24.6786632390745, Blast_Score=117, Evalue=3e-27, Organism=Saccharomyces cerevisiae, GI6320317, Length=369, Percent_Identity=24.6612466124661, Blast_Score=82, Evalue=1e-16, Organism=Drosophila melanogaster, GI28573069, Length=294, Percent_Identity=23.1292517006803, Blast_Score=114, Evalue=1e-25, Organism=Drosophila melanogaster, GI24646114, Length=294, Percent_Identity=23.1292517006803, Blast_Score=114, Evalue=1e-25, Organism=Drosophila melanogaster, GI28573067, Length=294, Percent_Identity=23.1292517006803, Blast_Score=114, Evalue=1e-25, Organism=Drosophila melanogaster, GI28573065, Length=294, Percent_Identity=23.1292517006803, Blast_Score=114, Evalue=1e-25, Organism=Drosophila melanogaster, GI18859735, Length=413, Percent_Identity=24.2130750605327, Blast_Score=113, Evalue=3e-25,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001176 - InterPro: IPR004839 - InterPro: IPR004838 - InterPro: IPR015424 - InterPro: IPR015421 - InterPro: IPR015422 [H]
Pfam domain/function: PF00155 Aminotran_1_2 [H]
EC number: =2.6.1.1 [H]
Molecular weight: Translated: 44235; Mature: 44104
Theoretical pI: Translated: 7.22; Mature: 7.22
Prosite motif: PS00105 AA_TRANSFER_CLASS_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLITHRINRIKSSPTLAVAKKAAELQQQGKNIISLSVGELNFDTHDNIKAQAIEAINRG CCHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCHHHHHHHHHHCC MTKYTNVDGMPELKQAVKNKFKVENNLDYQLDELIVSSGAKQVIFNALLATLDIGDEVII CCEECCCCCCHHHHHHHHHHEECCCCCCHHHHHHHHHCCHHHHHHHHHHHHHCCCCEEEE PTPYWVSYPDIVSLTGATSKFIYCHESSNFKITPAQLSNAITDKTKWLLLNSPNNPTGAI CCCCEECCCCCEEECCCCEEEEEEEECCCEEEEHHHHHHHHCCCEEEEEEECCCCCCCEE YTIEELKLLAEILSIHKNIHIMCDDIYEHIIFDNNKFYTLAAIAPSLKERIFIVNGVSKA EEHHHHHHHHHHHHHCCCEEEEEHHHHHHHEECCCCEEEEEEECCCCCCEEEEEECCCHH YAMTGWRIGYGAGNSEIIKAMIKIQSHSTSNPCSISQVAAIEALTGSQSHIQDNITILQR HHCCCEEEEECCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCHHHHHCCEEEEEC NRDLAFNILNNTIGLKCYKPTGTFYLFVSCQELLHKATSTGQKINTSNDFACYLLEEAEV CCCEEEEEECCCCEEEEECCCCCEEEEEEHHHHHHHHHCCCCEECCCCCEEEEEEECCCE SVVPGEAFGINGYFRLSYAVDAAELNIACLQIKKACEKLI EEECCCEECCCCEEEEEEEEEHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure SLITHRINRIKSSPTLAVAKKAAELQQQGKNIISLSVGELNFDTHDNIKAQAIEAINRG CHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCHHHHHHHHHHCC MTKYTNVDGMPELKQAVKNKFKVENNLDYQLDELIVSSGAKQVIFNALLATLDIGDEVII CCEECCCCCCHHHHHHHHHHEECCCCCCHHHHHHHHHCCHHHHHHHHHHHHHCCCCEEEE PTPYWVSYPDIVSLTGATSKFIYCHESSNFKITPAQLSNAITDKTKWLLLNSPNNPTGAI CCCCEECCCCCEEECCCCEEEEEEEECCCEEEEHHHHHHHHCCCEEEEEEECCCCCCCEE YTIEELKLLAEILSIHKNIHIMCDDIYEHIIFDNNKFYTLAAIAPSLKERIFIVNGVSKA EEHHHHHHHHHHHHHCCCEEEEEHHHHHHHEECCCCEEEEEEECCCCCCEEEEEECCCHH YAMTGWRIGYGAGNSEIIKAMIKIQSHSTSNPCSISQVAAIEALTGSQSHIQDNITILQR HHCCCEEEEECCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCHHHHHCCEEEEEC NRDLAFNILNNTIGLKCYKPTGTFYLFVSCQELLHKATSTGQKINTSNDFACYLLEEAEV CCCEEEEEECCCCEEEEECCCCCEEEEEEHHHHHHHHHCCCCEECCCCCEEEEEEECCCE SVVPGEAFGINGYFRLSYAVDAAELNIACLQIKKACEKLI EEECCCEECCCCEEEEEEEEEHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA