Definition Orientia tsutsugamushi str. Ikeda, complete genome.
Accession NC_010793
Length 2,008,987

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The map label for this gene is 189184086

Identifier: 189184086

GI number: 189184086

Start: 1205408

End: 1205596

Strand: Reverse

Name: 189184086

Synonym: OTT_1179

Alternate gene names: NA

Gene position: 1205596-1205408 (Counterclockwise)

Preceding gene: 189184087

Following gene: 189184077

Centisome position: 60.01

GC content: 28.04

Gene sequence:

>189_bases
ATGAATGATATTGAACAAATATTCAATGATATAAATAAAGAGCAGAAATATGCGACAGCAAATCTATTTCTAGTAAACTT
AGGAACTATATTTAATAAGGCAAAAAAATGGAGATTAATAGAAAACAATCCTACTCTGGTGATAGATAAGCATAAAATGC
AAGCAGATGACTTACAGGAAAGTTATTAG

Upstream 100 bases:

>100_bases
AGAGTATAGCAAAGTATATACTATAAACTGGAAGTAGAGTACTGCAAGAATATAGAATTATGCACAAGCATTATATGCAA
AAAAGATAAGCGATATTCAA

Downstream 100 bases:

>100_bases
CTTTTTGAGGATAAGCTGAATGTTGGTCAACGAAGAGTTAGGCGACGCTCAATAGAACTAAGAGATGCAGGTTTTATTGA
AGTTAAAAATAGGACAATAA

Product: putative integrase

Products: NA

Alternate protein names: Phage-Related Integrase

Number of amino acids: Translated: 62; Mature: 62

Protein sequence:

>62_residues
MNDIEQIFNDINKEQKYATANLFLVNLGTIFNKAKKWRLIENNPTLVIDKHKMQADDLQESY

Sequences:

>Translated_62_residues
MNDIEQIFNDINKEQKYATANLFLVNLGTIFNKAKKWRLIENNPTLVIDKHKMQADDLQESY
>Mature_62_residues
MNDIEQIFNDINKEQKYATANLFLVNLGTIFNKAKKWRLIENNPTLVIDKHKMQADDLQESY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 7327; Mature: 7327

Theoretical pI: Translated: 5.77; Mature: 5.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNDIEQIFNDINKEQKYATANLFLVNLGTIFNKAKKWRLIENNPTLVIDKHKMQADDLQE
CCHHHHHHHHCCHHCCHHHHHEEEEEHHHHHHHHHCCEEECCCCEEEEECCCCCCCCCCC
SY
CC
>Mature Secondary Structure
MNDIEQIFNDINKEQKYATANLFLVNLGTIFNKAKKWRLIENNPTLVIDKHKMQADDLQE
CCHHHHHHHHCCHHCCHHHHHEEEEEHHHHHHHHHCCEEECCCCEEEEECCCCCCCCCCC
SY
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA