| Definition | Orientia tsutsugamushi str. Ikeda, complete genome. |
|---|---|
| Accession | NC_010793 |
| Length | 2,008,987 |
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The map label for this gene is 189184076
Identifier: 189184076
GI number: 189184076
Start: 1196038
End: 1196475
Strand: Direct
Name: 189184076
Synonym: OTT_1169
Alternate gene names: NA
Gene position: 1196038-1196475 (Clockwise)
Preceding gene: 189184075
Following gene: 189184078
Centisome position: 59.53
GC content: 33.33
Gene sequence:
>438_bases ATGAAATTCGATCAGATTAAAGAGTTAAAAGATGAAAAATTTCGTCGATTAACAGGAGTAAGGAAGGGAACATTTTCAAA GATGGTGAATATTTTGAGGAAAGCTGATGGTCTTAAGAAATTAAATGGTGGGCGTAAAAATAAGCTCAATTTGGAGGAAC AGTTGCTGATGGCCTTAGAATACCTTAGAGAATACCGTACTTATTTCCATATAGGTCAGAACTGTTGGATTAGTGAAAGT TCAGCATATAAAGCTGTAAAATGGGTAGAAGACACCCTAGTTAAACACCCAAATTTTGCTCTTCCAGGTTGTAAAGCTAT AATGAAGAGTGATATGAATTATGAAGTAGTCTTGATTGATGCTACTGAGAGTTCTATAGAAAGGCCTAAAAAAAACAAAA ATTCTATTATTCATGAAAGAAGAAAAGGTATACACTAA
Upstream 100 bases:
>100_bases ATCGGAATAGACGTAAAAGATTCGGTCTTAGATTTAATTTGATCTCTGGCTCTGGCATTTATAATTTTGATCTACCTTAA CCAGTTTCGAAAGAGGTCTA
Downstream 100 bases:
>100_bases AAACTCAAATAGTGCTAGACAAGAAAACGCGCCAAGTAATATGTAATGATAAAAAAAATAATCGTAGGTTAGCAGGAGAA AGGGTTGTGAATGAAAATGT
Product: transposase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 145; Mature: 145
Protein sequence:
>145_residues MKFDQIKELKDEKFRRLTGVRKGTFSKMVNILRKADGLKKLNGGRKNKLNLEEQLLMALEYLREYRTYFHIGQNCWISES SAYKAVKWVEDTLVKHPNFALPGCKAIMKSDMNYEVVLIDATESSIERPKKNKNSIIHERRKGIH
Sequences:
>Translated_145_residues MKFDQIKELKDEKFRRLTGVRKGTFSKMVNILRKADGLKKLNGGRKNKLNLEEQLLMALEYLREYRTYFHIGQNCWISES SAYKAVKWVEDTLVKHPNFALPGCKAIMKSDMNYEVVLIDATESSIERPKKNKNSIIHERRKGIH >Mature_145_residues MKFDQIKELKDEKFRRLTGVRKGTFSKMVNILRKADGLKKLNGGRKNKLNLEEQLLMALEYLREYRTYFHIGQNCWISES SAYKAVKWVEDTLVKHPNFALPGCKAIMKSDMNYEVVLIDATESSIERPKKNKNSIIHERRKGIH
Specific function: Involved in the transposition of the insertion sequence [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the transposase 11 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002559 [H]
Pfam domain/function: PF01609 Transposase_11 [H]
EC number: NA
Molecular weight: Translated: 16987; Mature: 16987
Theoretical pI: Translated: 10.39; Mature: 10.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKFDQIKELKDEKFRRLTGVRKGTFSKMVNILRKADGLKKLNGGRKNKLNLEEQLLMALE CCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCHHHHCCCCCCCCCHHHHHHHHHH YLREYRTYFHIGQNCWISESSAYKAVKWVEDTLVKHPNFALPGCKAIMKSDMNYEVVLID HHHHHHHHHHCCCCCEECCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCEEEEEEE ATESSIERPKKNKNSIIHERRKGIH CCHHHHHCCCCCHHHHHHHHHCCCC >Mature Secondary Structure MKFDQIKELKDEKFRRLTGVRKGTFSKMVNILRKADGLKKLNGGRKNKLNLEEQLLMALE CCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCHHHHCCCCCCCCCHHHHHHHHHH YLREYRTYFHIGQNCWISESSAYKAVKWVEDTLVKHPNFALPGCKAIMKSDMNYEVVLID HHHHHHHHHHCCCCCEECCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCEEEEEEE ATESSIERPKKNKNSIIHERRKGIH CCHHHHHCCCCCHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1662761 [H]