Definition Orientia tsutsugamushi str. Ikeda, complete genome.
Accession NC_010793
Length 2,008,987

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The map label for this gene is 189184075

Identifier: 189184075

GI number: 189184075

Start: 1195613

End: 1196017

Strand: Direct

Name: 189184075

Synonym: OTT_1168

Alternate gene names: NA

Gene position: 1195613-1196017 (Clockwise)

Preceding gene: 189184074

Following gene: 189184076

Centisome position: 59.51

GC content: 28.4

Gene sequence:

>405_bases
ATGCATACACTAAAAACTCAAATAGTGGTATACAAGAAAACGCACCAAGTAATATGTACAGATTTTTCTAACGGTAAAAA
ACATGACTTTAGATTATTTAAGGAATCCAAAATTCTTATCAATCCTAAGGTTAAAGTGATTATTGATACAGGATATCAAG
GTATACAAAAAATTCACAATAATTCTGAATTACCAAAGAAAAAAAGCAAGAAAAATCCTTTAACTAAAAATGATAAAAAG
AATAATCGTAGATTAGAAGAAGAAAGAGTTGTCAATGAAAACGTTATTGGTATGCTAAAACGGTTCAAGATTATTGCTGA
CAAATATCGGAATAGACGTAAAAGATTCGGTCTTAGATTTAATTTGATCTCTGGCTCTGGCATTTATAATTTTGATCTAC
CTTAA

Upstream 100 bases:

>100_bases
CGAGTGATATGAATTATGAAGTAGTATTGATTGATGCTACTGAGAGTCCTATAGAAAGACCCCAAAAAAACAAAAATTCT
ATTATTCAGGAAAGAAGAAA

Downstream 100 bases:

>100_bases
CCAGTTTCGAAAGAGGTCTAATGAAATTCGATCAGATTAAAGAGTTAAAAGATGAAAAATTTCGTCGATTAACAGGAGTA
AGGAAGGGAACATTTTCAAA

Product: transposase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 134; Mature: 134

Protein sequence:

>134_residues
MHTLKTQIVVYKKTHQVICTDFSNGKKHDFRLFKESKILINPKVKVIIDTGYQGIQKIHNNSELPKKKSKKNPLTKNDKK
NNRRLEEERVVNENVIGMLKRFKIIADKYRNRRKRFGLRFNLISGSGIYNFDLP

Sequences:

>Translated_134_residues
MHTLKTQIVVYKKTHQVICTDFSNGKKHDFRLFKESKILINPKVKVIIDTGYQGIQKIHNNSELPKKKSKKNPLTKNDKK
NNRRLEEERVVNENVIGMLKRFKIIADKYRNRRKRFGLRFNLISGSGIYNFDLP
>Mature_134_residues
MHTLKTQIVVYKKTHQVICTDFSNGKKHDFRLFKESKILINPKVKVIIDTGYQGIQKIHNNSELPKKKSKKNPLTKNDKK
NNRRLEEERVVNENVIGMLKRFKIIADKYRNRRKRFGLRFNLISGSGIYNFDLP

Specific function: Involved in the transposition of the insertion sequence [H]

COG id: COG3293

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transposase 11 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002559 [H]

Pfam domain/function: PF01609 Transposase_11 [H]

EC number: NA

Molecular weight: Translated: 15842; Mature: 15842

Theoretical pI: Translated: 11.05; Mature: 11.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHTLKTQIVVYKKTHQVICTDFSNGKKHDFRLFKESKILINPKVKVIIDTGYQGIQKIHN
CCCCCEEEEEEECCCEEEEEECCCCCCCCEEEEECCEEEECCCEEEEEECCHHHHHHHHC
NSELPKKKSKKNPLTKNDKKNNRRLEEERVVNENVIGMLKRFKIIADKYRNRRKRFGLRF
CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEE
NLISGSGIYNFDLP
EEEECCCEEECCCC
>Mature Secondary Structure
MHTLKTQIVVYKKTHQVICTDFSNGKKHDFRLFKESKILINPKVKVIIDTGYQGIQKIHN
CCCCCEEEEEEECCCEEEEEECCCCCCCCEEEEECCEEEECCCEEEEEECCHHHHHHHHC
NSELPKKKSKKNPLTKNDKKNNRRLEEERVVNENVIGMLKRFKIIADKYRNRRKRFGLRF
CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEE
NLISGSGIYNFDLP
EEEECCCEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1662761 [H]