Definition Orientia tsutsugamushi str. Ikeda, complete genome.
Accession NC_010793
Length 2,008,987

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The map label for this gene is 189184009

Identifier: 189184009

GI number: 189184009

Start: 1133915

End: 1134313

Strand: Reverse

Name: 189184009

Synonym: OTT_1102

Alternate gene names: NA

Gene position: 1134313-1133915 (Counterclockwise)

Preceding gene: 189184010

Following gene: 189184008

Centisome position: 56.46

GC content: 29.07

Gene sequence:

>399_bases
TTGAGTTATAAGTATAAAAGATACTTTTGCTTACCAAGCTATACTAGAATAATACAACTGTGGCCTAGAATATTGCTGCC
ATTAGTTGTATTAATGCATTATCTGAAAGGAGAAGAGACTGGTATATATCACATCGATTCTACAAAGTTAGCAATTTGTC
ATAATAAACGTACCTCCAGCAATAGAGTTTTTAACAAAATTTCTAAAATTGGTAAAAGTAGTTATGGCTCATTCTTAGAC
TTTAAGTTACATCTTATAATCAATAATAAAGGCGAAATAATGTCAGTTAAAATAATAAAAGCCACCTATCTGTATCTTCA
GTTTTTTCTAAAGGCTTATCTGGTAAATTGTTTAGTGATAAAGCTTACATATCTAAAGAGTTATTTCATCAACTGTTGA

Upstream 100 bases:

>100_bases
TGTAAACGCCAGATTAGGATAAGTGGAAAAATGAAATGTAGAGAATAAAAGGTATACAAAGAGAGAATGTAAGGATTTTA
AAAATTATTATCTATATTAC

Downstream 100 bases:

>100_bases
CCAATGGTTTACGTTTATTTACTAATCTTCGTAAAGATATGAAAACATATTTATTGGACATGCAAGATAATAGGTTATTA
AATAAACGTTCTTTAATTGA

Product: transposase

Products: NA

Alternate protein names: Transposase IS4 Family Protein; Transposase And Inactivated Derivative; Membrane-Associated Metal-Dependent Hydrolase; Transposase IS4 Family; Transposase IS; ISPg3 Transposase; IS4 Family Transposase

Number of amino acids: Translated: 132; Mature: 131

Protein sequence:

>132_residues
MSYKYKRYFCLPSYTRIIQLWPRILLPLVVLMHYLKGEETGIYHIDSTKLAICHNKRTSSNRVFNKISKIGKSSYGSFLD
FKLHLIINNKGEIMSVKIIKATYLYLQFFLKAYLVNCLVIKLTYLKSYFINC

Sequences:

>Translated_132_residues
MSYKYKRYFCLPSYTRIIQLWPRILLPLVVLMHYLKGEETGIYHIDSTKLAICHNKRTSSNRVFNKISKIGKSSYGSFLD
FKLHLIINNKGEIMSVKIIKATYLYLQFFLKAYLVNCLVIKLTYLKSYFINC
>Mature_131_residues
SYKYKRYFCLPSYTRIIQLWPRILLPLVVLMHYLKGEETGIYHIDSTKLAICHNKRTSSNRVFNKISKIGKSSYGSFLDF
KLHLIINNKGEIMSVKIIKATYLYLQFFLKAYLVNCLVIKLTYLKSYFINC

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15607; Mature: 15476

Theoretical pI: Translated: 10.23; Mature: 10.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
3.1 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSYKYKRYFCLPSYTRIIQLWPRILLPLVVLMHYLKGEETGIYHIDSTKLAICHNKRTSS
CCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCEEEEEECCCCCH
NRVFNKISKIGKSSYGSFLDFKLHLIINNKGEIMSVKIIKATYLYLQFFLKAYLVNCLVI
HHHHHHHHHHCCCCCCCEEEEEEEEEECCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHH
KLTYLKSYFINC
HHHHHHHHHCCC
>Mature Secondary Structure 
SYKYKRYFCLPSYTRIIQLWPRILLPLVVLMHYLKGEETGIYHIDSTKLAICHNKRTSS
CCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCEEEEEECCCCCH
NRVFNKISKIGKSSYGSFLDFKLHLIINNKGEIMSVKIIKATYLYLQFFLKAYLVNCLVI
HHHHHHHHHHCCCCCCCEEEEEEEEEECCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHH
KLTYLKSYFINC
HHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA