| Definition | Orientia tsutsugamushi str. Ikeda, complete genome. |
|---|---|
| Accession | NC_010793 |
| Length | 2,008,987 |
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The map label for this gene is 189184009
Identifier: 189184009
GI number: 189184009
Start: 1133915
End: 1134313
Strand: Reverse
Name: 189184009
Synonym: OTT_1102
Alternate gene names: NA
Gene position: 1134313-1133915 (Counterclockwise)
Preceding gene: 189184010
Following gene: 189184008
Centisome position: 56.46
GC content: 29.07
Gene sequence:
>399_bases TTGAGTTATAAGTATAAAAGATACTTTTGCTTACCAAGCTATACTAGAATAATACAACTGTGGCCTAGAATATTGCTGCC ATTAGTTGTATTAATGCATTATCTGAAAGGAGAAGAGACTGGTATATATCACATCGATTCTACAAAGTTAGCAATTTGTC ATAATAAACGTACCTCCAGCAATAGAGTTTTTAACAAAATTTCTAAAATTGGTAAAAGTAGTTATGGCTCATTCTTAGAC TTTAAGTTACATCTTATAATCAATAATAAAGGCGAAATAATGTCAGTTAAAATAATAAAAGCCACCTATCTGTATCTTCA GTTTTTTCTAAAGGCTTATCTGGTAAATTGTTTAGTGATAAAGCTTACATATCTAAAGAGTTATTTCATCAACTGTTGA
Upstream 100 bases:
>100_bases TGTAAACGCCAGATTAGGATAAGTGGAAAAATGAAATGTAGAGAATAAAAGGTATACAAAGAGAGAATGTAAGGATTTTA AAAATTATTATCTATATTAC
Downstream 100 bases:
>100_bases CCAATGGTTTACGTTTATTTACTAATCTTCGTAAAGATATGAAAACATATTTATTGGACATGCAAGATAATAGGTTATTA AATAAACGTTCTTTAATTGA
Product: transposase
Products: NA
Alternate protein names: Transposase IS4 Family Protein; Transposase And Inactivated Derivative; Membrane-Associated Metal-Dependent Hydrolase; Transposase IS4 Family; Transposase IS; ISPg3 Transposase; IS4 Family Transposase
Number of amino acids: Translated: 132; Mature: 131
Protein sequence:
>132_residues MSYKYKRYFCLPSYTRIIQLWPRILLPLVVLMHYLKGEETGIYHIDSTKLAICHNKRTSSNRVFNKISKIGKSSYGSFLD FKLHLIINNKGEIMSVKIIKATYLYLQFFLKAYLVNCLVIKLTYLKSYFINC
Sequences:
>Translated_132_residues MSYKYKRYFCLPSYTRIIQLWPRILLPLVVLMHYLKGEETGIYHIDSTKLAICHNKRTSSNRVFNKISKIGKSSYGSFLD FKLHLIINNKGEIMSVKIIKATYLYLQFFLKAYLVNCLVIKLTYLKSYFINC >Mature_131_residues SYKYKRYFCLPSYTRIIQLWPRILLPLVVLMHYLKGEETGIYHIDSTKLAICHNKRTSSNRVFNKISKIGKSSYGSFLDF KLHLIINNKGEIMSVKIIKATYLYLQFFLKAYLVNCLVIKLTYLKSYFINC
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15607; Mature: 15476
Theoretical pI: Translated: 10.23; Mature: 10.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 3.1 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSYKYKRYFCLPSYTRIIQLWPRILLPLVVLMHYLKGEETGIYHIDSTKLAICHNKRTSS CCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCEEEEEECCCCCH NRVFNKISKIGKSSYGSFLDFKLHLIINNKGEIMSVKIIKATYLYLQFFLKAYLVNCLVI HHHHHHHHHHCCCCCCCEEEEEEEEEECCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHH KLTYLKSYFINC HHHHHHHHHCCC >Mature Secondary Structure SYKYKRYFCLPSYTRIIQLWPRILLPLVVLMHYLKGEETGIYHIDSTKLAICHNKRTSS CCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCEEEEEECCCCCH NRVFNKISKIGKSSYGSFLDFKLHLIINNKGEIMSVKIIKATYLYLQFFLKAYLVNCLVI HHHHHHHHHHCCCCCCCEEEEEEEEEECCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHH KLTYLKSYFINC HHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA