Definition Orientia tsutsugamushi str. Ikeda, complete genome.
Accession NC_010793
Length 2,008,987

Click here to switch to the map view.

The map label for this gene is 189184008

Identifier: 189184008

GI number: 189184008

Start: 1133652

End: 1133966

Strand: Reverse

Name: 189184008

Synonym: OTT_1101

Alternate gene names: NA

Gene position: 1133966-1133652 (Counterclockwise)

Preceding gene: 189184009

Following gene: 189184007

Centisome position: 56.44

GC content: 28.89

Gene sequence:

>315_bases
TTGTTTAGTGATAAAGCTTACATATCTAAAGAGTTATTTCATCAACTGTTGACCAATGGTTTACGTTTATTTACTAATCT
TCGTAAAGATATGAAAACATATTTATTGGACATGCAAGATAATAGGTTATTAAATAAACGTTCTTTAATTGAGTCTGTCT
TTAATGTACTAAAAAAACATATGCTTTTAGAGCATACTAGACACCGTTCTCCTCTTAATTTTTTTGTTCATATAATTGCT
TCTCTTGCTAGTTATTCTATCTCTAAACTTAATCCCCATCTTATCTCTTCTTCTTTTCCTGACTCCTTATCCTAA

Upstream 100 bases:

>100_bases
TACATCTTATAATCAATAATAAAGGCGAAATAATGTCAGTTAAAATAATAAAAGCCACCTATCTGTATCTTCAGTTTTTT
CTAAAGGCTTATCTGGTAAA

Downstream 100 bases:

>100_bases
AATTGACGTTTTGAAAGCAATAACTGCAGATAAGCTATATGTAATGATACGAAGTTATCAGGAAAGCATAATATAGTAAA
TCCGTACGTTACGTTTGATG

Product: transposase

Products: NA

Alternate protein names: Transposase IS4 Family Protein; ISPg3 Transposase; Transposase And Inactivated Derivative; Transposase IS4 Family; IS4 Family Transposase; Membrane-Associated Metal-Dependent Hydrolase

Number of amino acids: Translated: 104; Mature: 104

Protein sequence:

>104_residues
MFSDKAYISKELFHQLLTNGLRLFTNLRKDMKTYLLDMQDNRLLNKRSLIESVFNVLKKHMLLEHTRHRSPLNFFVHIIA
SLASYSISKLNPHLISSSFPDSLS

Sequences:

>Translated_104_residues
MFSDKAYISKELFHQLLTNGLRLFTNLRKDMKTYLLDMQDNRLLNKRSLIESVFNVLKKHMLLEHTRHRSPLNFFVHIIA
SLASYSISKLNPHLISSSFPDSLS
>Mature_104_residues
MFSDKAYISKELFHQLLTNGLRLFTNLRKDMKTYLLDMQDNRLLNKRSLIESVFNVLKKHMLLEHTRHRSPLNFFVHIIA
SLASYSISKLNPHLISSSFPDSLS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12177; Mature: 12177

Theoretical pI: Translated: 10.52; Mature: 10.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFSDKAYISKELFHQLLTNGLRLFTNLRKDMKTYLLDMQDNRLLNKRSLIESVFNVLKKH
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
MLLEHTRHRSPLNFFVHIIASLASYSISKLNPHLISSSFPDSLS
HHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCC
>Mature Secondary Structure
MFSDKAYISKELFHQLLTNGLRLFTNLRKDMKTYLLDMQDNRLLNKRSLIESVFNVLKKH
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
MLLEHTRHRSPLNFFVHIIASLASYSISKLNPHLISSSFPDSLS
HHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA