| Definition | Orientia tsutsugamushi str. Ikeda, complete genome. |
|---|---|
| Accession | NC_010793 |
| Length | 2,008,987 |
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The map label for this gene is 189184005
Identifier: 189184005
GI number: 189184005
Start: 1128093
End: 1129907
Strand: Reverse
Name: 189184005
Synonym: OTT_1098
Alternate gene names: NA
Gene position: 1129907-1128093 (Counterclockwise)
Preceding gene: 189184006
Following gene: 189184004
Centisome position: 56.24
GC content: 25.67
Gene sequence:
>1815_bases ATGAGAAAAGTATATATAATTTTAATTACAAGCATTGTAGTACTATTACTTTTGCTTATTAGTTGGTATGCGGTATGGGA AATATTGGCTAATCGAATCACTAAAACATATGGAAAAAGAGATATTACAGTATATCAACAAGATAGCACTTACTCAACTA TTAGCTTTTCAACTGTTAAAGCAATCACTACGCCTCTTAGTATAGGATTCGATGTTTTAGGTGTTACTATTAGTAGTATA TCCGATAGTAACATATCTAAAATAATAAAATGCGATTCACCAATTAAAATAAGATATAGTTTAGCATCTAAAATTTTTTT AATAGAGTATAGTGGTCAATGTTACAGTAAGCAGACATATGACTCGAATGACTCGAAATCAAGTTTTAACAATAATGTAG TTAAGATAGATGCTACGATATCTAGCGAATTAAAATTGTCAAAAAGACTATTTCAAATATTGAAAGAACATAATGCATTT GAATTAATCAATTATCTAAATCACTTTAAGCTTAACGTCAGAGAGTTTTCTGATTATGATAATGTTAAAAATCTACTAAA AAATAAAATACTAAAATCGTATTTTCACATTAGTTTTGATAATCATCCATACTATTACAGTGTTGATGATCTTCGAAATG ATATACCTAAAAATTATGCTATAGATAGCAAGATTACAGTAGATCATATGAATTATTCATTTTCTCCTTGGAGTTTTGAG TTTAAATCAACTTTGGATTTGTTATTGCCAAAAGTTTCTTGGTATTCCATAACAAAAAATATAGAGCAGAATAGTTTTAA TGGTCAATTAAGTATTGAAAAACTATTTTATGAAGATAACAAGCTGGCAGTATCTAGTAAAATAGATTATCAAAACTTAG CTCATAGAGAAAATAAAAACAATAAACTAGCGACCTATTTTGTTTTAAATATCAAAGACAAATTATCTTTTATTAAGATT TTACTGGCTAGTATTTTAAATATAGATGATGAAGAAAAAACAAATTCTGATATTACTGCTATATTACAGAAGATGGAAAA TTTTGATTTTAAAACAGCAATGCAAAACATAGCTTTTCTATATACCGATAATGATATGTCATTACAAAAAAAAGAATGTT TAGCAAAATTAGATTATTTTGATCAAATAATTAATACAATTGCATTCCCTAATCAAATAATGCTAAATCTGGATTTTGAA TTATTATCTAGTAGCCAGAGTAACATATTTAGACTTAATTTTTTAAAAATATTATTAAATGATTTTGGAATTGATATCAA AGACTCTCTCTATGACACAACAAATCCAAGGTTTGTAACTAATTTTTATCTGCTAAATTTTAGAGATTTAGTAGACTTTA TTATTGACTTTTACAATATTAAAACAATTATTGAAAATCATATTAAACTAAATAGTAAAGAAAACAAAATAGATGAAAAT ATACTACAACAAAATCAATTAGTTGAACTTAATAAAGATATTTTAAAGTCGTTTTTATCAAAAATTTCAAAGCCATTACA TGATTCACCAAATATTAGAGTAATCAATTGTCATTATGATATATCTAATAAAATAAGAATTGGTAATTTAGACTTACTGG CAATAAGAGGTATGTACTATAGAACACTATATAATCAGGTACGTGAAATAATTACTAAATCTTCTACTCCTAGCAAACTA ATACTAAAGTTTTTACCTCAGCTGCAGCAAAAGTCTGACTTAATAGATAAGCTAAATCGTTCTCCAGAAATTATTACACA AGAATTATGGATGGAAGTTTTAAAATCATTGTTAGAAGCACCAGCATGCCAGTAG
Upstream 100 bases:
>100_bases TAATGGGAGTATTTATACTAGTAGTTTTAATTTGGTTAATTGACGTTGTAAACCTTTATCATAAATATGATGATTTACAA CAATTTATGGAAAAGAAGTA
Downstream 100 bases:
>100_bases AACTTAAGTATGTAAGTGTATGAACTTAAAATTCAGTAACAACTGTAATAGCTTTATCGATAAATTAAGTAAGTTTCTAG ATAAAGATATGTCTGAAGTA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 604; Mature: 604
Protein sequence:
>604_residues MRKVYIILITSIVVLLLLLISWYAVWEILANRITKTYGKRDITVYQQDSTYSTISFSTVKAITTPLSIGFDVLGVTISSI SDSNISKIIKCDSPIKIRYSLASKIFLIEYSGQCYSKQTYDSNDSKSSFNNNVVKIDATISSELKLSKRLFQILKEHNAF ELINYLNHFKLNVREFSDYDNVKNLLKNKILKSYFHISFDNHPYYYSVDDLRNDIPKNYAIDSKITVDHMNYSFSPWSFE FKSTLDLLLPKVSWYSITKNIEQNSFNGQLSIEKLFYEDNKLAVSSKIDYQNLAHRENKNNKLATYFVLNIKDKLSFIKI LLASILNIDDEEKTNSDITAILQKMENFDFKTAMQNIAFLYTDNDMSLQKKECLAKLDYFDQIINTIAFPNQIMLNLDFE LLSSSQSNIFRLNFLKILLNDFGIDIKDSLYDTTNPRFVTNFYLLNFRDLVDFIIDFYNIKTIIENHIKLNSKENKIDEN ILQQNQLVELNKDILKSFLSKISKPLHDSPNIRVINCHYDISNKIRIGNLDLLAIRGMYYRTLYNQVREIITKSSTPSKL ILKFLPQLQQKSDLIDKLNRSPEIITQELWMEVLKSLLEAPACQ
Sequences:
>Translated_604_residues MRKVYIILITSIVVLLLLLISWYAVWEILANRITKTYGKRDITVYQQDSTYSTISFSTVKAITTPLSIGFDVLGVTISSI SDSNISKIIKCDSPIKIRYSLASKIFLIEYSGQCYSKQTYDSNDSKSSFNNNVVKIDATISSELKLSKRLFQILKEHNAF ELINYLNHFKLNVREFSDYDNVKNLLKNKILKSYFHISFDNHPYYYSVDDLRNDIPKNYAIDSKITVDHMNYSFSPWSFE FKSTLDLLLPKVSWYSITKNIEQNSFNGQLSIEKLFYEDNKLAVSSKIDYQNLAHRENKNNKLATYFVLNIKDKLSFIKI LLASILNIDDEEKTNSDITAILQKMENFDFKTAMQNIAFLYTDNDMSLQKKECLAKLDYFDQIINTIAFPNQIMLNLDFE LLSSSQSNIFRLNFLKILLNDFGIDIKDSLYDTTNPRFVTNFYLLNFRDLVDFIIDFYNIKTIIENHIKLNSKENKIDEN ILQQNQLVELNKDILKSFLSKISKPLHDSPNIRVINCHYDISNKIRIGNLDLLAIRGMYYRTLYNQVREIITKSSTPSKL ILKFLPQLQQKSDLIDKLNRSPEIITQELWMEVLKSLLEAPACQ >Mature_604_residues MRKVYIILITSIVVLLLLLISWYAVWEILANRITKTYGKRDITVYQQDSTYSTISFSTVKAITTPLSIGFDVLGVTISSI SDSNISKIIKCDSPIKIRYSLASKIFLIEYSGQCYSKQTYDSNDSKSSFNNNVVKIDATISSELKLSKRLFQILKEHNAF ELINYLNHFKLNVREFSDYDNVKNLLKNKILKSYFHISFDNHPYYYSVDDLRNDIPKNYAIDSKITVDHMNYSFSPWSFE FKSTLDLLLPKVSWYSITKNIEQNSFNGQLSIEKLFYEDNKLAVSSKIDYQNLAHRENKNNKLATYFVLNIKDKLSFIKI LLASILNIDDEEKTNSDITAILQKMENFDFKTAMQNIAFLYTDNDMSLQKKECLAKLDYFDQIINTIAFPNQIMLNLDFE LLSSSQSNIFRLNFLKILLNDFGIDIKDSLYDTTNPRFVTNFYLLNFRDLVDFIIDFYNIKTIIENHIKLNSKENKIDEN ILQQNQLVELNKDILKSFLSKISKPLHDSPNIRVINCHYDISNKIRIGNLDLLAIRGMYYRTLYNQVREIITKSSTPSKL ILKFLPQLQQKSDLIDKLNRSPEIITQELWMEVLKSLLEAPACQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 70389; Mature: 70389
Theoretical pI: Translated: 8.52; Mature: 8.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRKVYIILITSIVVLLLLLISWYAVWEILANRITKTYGKRDITVYQQDSTYSTISFSTVK CCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCEEEEEHHHHH AITTPLSIGFDVLGVTISSISDSNISKIIKCDSPIKIRYSLASKIFLIEYSGQCYSKQTY HHHHHHHCCHHHHHHHHHCCCCCCCHHHEECCCCCEEEEEECCEEEEEEECCCCCCCCCC DSNDSKSSFNNNVVKIDATISSELKLSKRLFQILKEHNAFELINYLNHFKLNVREFSDYD CCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHEEEHHHHCCHH NVKNLLKNKILKSYFHISFDNHPYYYSVDDLRNDIPKNYAIDSKITVDHMNYSFSPWSFE HHHHHHHHHHHHHHHEEEECCCCCEEEHHHHHHCCCCCCCCCCEEEEEECCCCCCCCCCH FKSTLDLLLPKVSWYSITKNIEQNSFNGQLSIEKLFYEDNKLAVSSKIDYQNLAHRENKN HHHHHHHHHCCCHHHHHHCCCCCCCCCCCEEEEEEEECCCCEEEECCCCHHHHHHHCCCC NKLATYFVLNIKDKLSFIKILLASILNIDDEEKTNSDITAILQKMENFDFKTAMQNIAFL CEEEEEEEEEEHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCHHHHHCCEEEE YTDNDMSLQKKECLAKLDYFDQIINTIAFPNQIMLNLDFELLSSSQSNIFRLNFLKILLN EECCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECHHHHCCCCCCEEHHHHHHHHHH DFGIDIKDSLYDTTNPRFVTNFYLLNFRDLVDFIIDFYNIKTIIENHIKLNSKENKIDEN HHCCCCCHHHCCCCCCCEEEEEEEECHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHH ILQQNQLVELNKDILKSFLSKISKPLHDSPNIRVINCHYDISNKIRIGNLDLLAIRGMYY HHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEECCCCCEEECCEEEEEHHHHHH RTLYNQVREIITKSSTPSKLILKFLPQLQQKSDLIDKLNRSPEIITQELWMEVLKSLLEA HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCC PACQ CCCC >Mature Secondary Structure MRKVYIILITSIVVLLLLLISWYAVWEILANRITKTYGKRDITVYQQDSTYSTISFSTVK CCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCEEEEEHHHHH AITTPLSIGFDVLGVTISSISDSNISKIIKCDSPIKIRYSLASKIFLIEYSGQCYSKQTY HHHHHHHCCHHHHHHHHHCCCCCCCHHHEECCCCCEEEEEECCEEEEEEECCCCCCCCCC DSNDSKSSFNNNVVKIDATISSELKLSKRLFQILKEHNAFELINYLNHFKLNVREFSDYD CCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHEEEHHHHCCHH NVKNLLKNKILKSYFHISFDNHPYYYSVDDLRNDIPKNYAIDSKITVDHMNYSFSPWSFE HHHHHHHHHHHHHHHEEEECCCCCEEEHHHHHHCCCCCCCCCCEEEEEECCCCCCCCCCH FKSTLDLLLPKVSWYSITKNIEQNSFNGQLSIEKLFYEDNKLAVSSKIDYQNLAHRENKN HHHHHHHHHCCCHHHHHHCCCCCCCCCCCEEEEEEEECCCCEEEECCCCHHHHHHHCCCC NKLATYFVLNIKDKLSFIKILLASILNIDDEEKTNSDITAILQKMENFDFKTAMQNIAFL CEEEEEEEEEEHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCHHHHHCCEEEE YTDNDMSLQKKECLAKLDYFDQIINTIAFPNQIMLNLDFELLSSSQSNIFRLNFLKILLN EECCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECHHHHCCCCCCEEHHHHHHHHHH DFGIDIKDSLYDTTNPRFVTNFYLLNFRDLVDFIIDFYNIKTIIENHIKLNSKENKIDEN HHCCCCCHHHCCCCCCCEEEEEEEECHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHH ILQQNQLVELNKDILKSFLSKISKPLHDSPNIRVINCHYDISNKIRIGNLDLLAIRGMYY HHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEECCCCCEEECCEEEEEHHHHHH RTLYNQVREIITKSSTPSKLILKFLPQLQQKSDLIDKLNRSPEIITQELWMEVLKSLLEA HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCC PACQ CCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA