| Definition | Orientia tsutsugamushi str. Ikeda, complete genome. |
|---|---|
| Accession | NC_010793 |
| Length | 2,008,987 |
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The map label for this gene is 189184003
Identifier: 189184003
GI number: 189184003
Start: 1125575
End: 1125898
Strand: Reverse
Name: 189184003
Synonym: OTT_1096
Alternate gene names: NA
Gene position: 1125898-1125575 (Counterclockwise)
Preceding gene: 189184004
Following gene: 189184002
Centisome position: 56.04
GC content: 25.31
Gene sequence:
>324_bases ATGGATAAGGTAGAAGCAGAAAAAATTGCTTTTGAGGTTGCTAAAATCAACAATGAAATACCTGAAGATTTGGATGATCA TATTAATGATGGCAACTTTTCTACTAAACGAGATATACAAGAAATTTTTAATAAAAAATCTGAGGAGTTAAAATGTCAAA ACGCTAATTATATAAATAATAAGGCTTATAATAATAATAATAATATAGAACAAATTTTTAGTGATAACGAAAAAATAGAG AATCTTAATCGAATTTCTGATAATAGATCTCTTTCGAAACTCGTTAAGGTAGTTCAAAATTATAAATGCCAGAGATCAAA TTAA
Upstream 100 bases:
>100_bases AATTATGTATCCCAAAAACTCTACTACTATTGATCGTAATATTAATGAATGAAATTATGGCTCGAAATCCTGAAATAACA AGCAAGGAGCAAGCAGCTAG
Downstream 100 bases:
>100_bases ATCTAAAACCGAATCTTTTACGTCTATTTCGATATTTATCAGCAATAATTTTGAACTACCTTAACGAGTTTCGAAAGAGG TCTAATATTAAAAATGAGAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 107; Mature: 107
Protein sequence:
>107_residues MDKVEAEKIAFEVAKINNEIPEDLDDHINDGNFSTKRDIQEIFNKKSEELKCQNANYINNKAYNNNNNIEQIFSDNEKIE NLNRISDNRSLSKLVKVVQNYKCQRSN
Sequences:
>Translated_107_residues MDKVEAEKIAFEVAKINNEIPEDLDDHINDGNFSTKRDIQEIFNKKSEELKCQNANYINNKAYNNNNNIEQIFSDNEKIE NLNRISDNRSLSKLVKVVQNYKCQRSN >Mature_107_residues MDKVEAEKIAFEVAKINNEIPEDLDDHINDGNFSTKRDIQEIFNKKSEELKCQNANYINNKAYNNNNNIEQIFSDNEKIE NLNRISDNRSLSKLVKVVQNYKCQRSN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12524; Mature: 12524
Theoretical pI: Translated: 4.96; Mature: 4.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDKVEAEKIAFEVAKINNEIPEDLDDHINDGNFSTKRDIQEIFNKKSEELKCQNANYINN CCCCHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCCHHHHHHHHCCCHHHHCCCCCCCCCC KAYNNNNNIEQIFSDNEKIENLNRISDNRSLSKLVKVVQNYKCQRSN CCCCCCCCHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MDKVEAEKIAFEVAKINNEIPEDLDDHINDGNFSTKRDIQEIFNKKSEELKCQNANYINN CCCCHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCCHHHHHHHHCCCHHHHCCCCCCCCCC KAYNNNNNIEQIFSDNEKIENLNRISDNRSLSKLVKVVQNYKCQRSN CCCCCCCCHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA