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The map label for this gene is ftsY [H]

Identifier: 189183987

GI number: 189183987

Start: 1110451

End: 1111398

Strand: Direct

Name: ftsY [H]

Synonym: OTT_1080

Alternate gene names: 189183987

Gene position: 1110451-1111398 (Clockwise)

Preceding gene: 189183985

Following gene: 189183988

Centisome position: 55.27

GC content: 30.59

Gene sequence:

>948_bases
ATGAAATTTATGTCATCCTGGCTTAATAAGCTTACTGCAGCTGTTAGTAAGACAACTAATAAGCTTACAGTACAAATTAC
TAAACTTTTTTCTGAAAAAACTATAACCAAAGAATCTATTGAACAGCTGGAAGAGGTTTTATTAAGTGCTGATTTTGGTG
TTACAGCTACTAATAATATTATCGAAAATTTTAAAACGATTAAATTTAATAAGAATATTCAGTTAGATGATATTAAATCA
GAGCTAGCAAAATCAATTATAAAATTTGCTTTTCCAAACGGAAATCCTGAACTACATATTAAGCCAGGTGTACTTAATGT
AATGATTATATGTGGAATTAATGGTAATGGTAAAACTACAACTATTGGTAAATTATCACATTACTATAACTTGCAAGGAC
AAAAAGTAGCTATAGCTGCTTGTGATACTTTTAGAGCCGCAGCAACAGAGCAGCTAGAAATATGGGCAAATAGGTCAGGT
AGCTATCTATTTAAAGGAAATCCAGGGGCAGATCCTGCAAGTGTAGCATATCAAGCTGCTGGTTGGGCAATAGATAATAA
AATGAACATATTGTTTATTGATACAGCTGGTAGACTTCATAATCATAAAAATTTAATGGATCAATTAAAAAAGATCAAAA
AGGTTATTAATCAGTATCATAGTAGTTCTGTATGTTATACTTTACTTACTCTAGATGCTACTAATGGGCAAAATGCCTTT
ACTCAAGTTGAGCAATTTCAAGATATTGTATTATTAGATGGAGTAATTATTACAAAACTTGATAGCACATCAAAAGCAGG
AGTGGCTGTAGGGATAGCTGAAAAGTTTAAAATTCCTATTTATTTTATTGGTATAGGGGAACAAATTGATGATATTAAGG
AATTTAATGCTAGTGATTTTGTAAATGCAATATTAGCAGGGCTTACACAAACGAATAAAAATATGTAG

Upstream 100 bases:

>100_bases
TTTAAACTGCTCTTTTGTTGTTTACTTGATTCATTTGAATTTATACTTATAAAAGCTTATATATATTATAATATAAAAAT
TCTAAAATAAAAAACAAGGT

Downstream 100 bases:

>100_bases
AGAAGAGATATTTTTGGCAAAAGTACAAAGAAAAATTGTAATTGTTTGCAAAAAAACCTGCATACTATTTTGTTTTTGAA
ATTGAAAATGTGGTTATTTT

Product: signal recognition particle receptor FtsY

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 315; Mature: 315

Protein sequence:

>315_residues
MKFMSSWLNKLTAAVSKTTNKLTVQITKLFSEKTITKESIEQLEEVLLSADFGVTATNNIIENFKTIKFNKNIQLDDIKS
ELAKSIIKFAFPNGNPELHIKPGVLNVMIICGINGNGKTTTIGKLSHYYNLQGQKVAIAACDTFRAAATEQLEIWANRSG
SYLFKGNPGADPASVAYQAAGWAIDNKMNILFIDTAGRLHNHKNLMDQLKKIKKVINQYHSSSVCYTLLTLDATNGQNAF
TQVEQFQDIVLLDGVIITKLDSTSKAGVAVGIAEKFKIPIYFIGIGEQIDDIKEFNASDFVNAILAGLTQTNKNM

Sequences:

>Translated_315_residues
MKFMSSWLNKLTAAVSKTTNKLTVQITKLFSEKTITKESIEQLEEVLLSADFGVTATNNIIENFKTIKFNKNIQLDDIKS
ELAKSIIKFAFPNGNPELHIKPGVLNVMIICGINGNGKTTTIGKLSHYYNLQGQKVAIAACDTFRAAATEQLEIWANRSG
SYLFKGNPGADPASVAYQAAGWAIDNKMNILFIDTAGRLHNHKNLMDQLKKIKKVINQYHSSSVCYTLLTLDATNGQNAF
TQVEQFQDIVLLDGVIITKLDSTSKAGVAVGIAEKFKIPIYFIGIGEQIDDIKEFNASDFVNAILAGLTQTNKNM
>Mature_315_residues
MKFMSSWLNKLTAAVSKTTNKLTVQITKLFSEKTITKESIEQLEEVLLSADFGVTATNNIIENFKTIKFNKNIQLDDIKS
ELAKSIIKFAFPNGNPELHIKPGVLNVMIICGINGNGKTTTIGKLSHYYNLQGQKVAIAACDTFRAAATEQLEIWANRSG
SYLFKGNPGADPASVAYQAAGWAIDNKMNILFIDTAGRLHNHKNLMDQLKKIKKVINQYHSSSVCYTLLTLDATNGQNAF
TQVEQFQDIVLLDGVIITKLDSTSKAGVAVGIAEKFKIPIYFIGIGEQIDDIKEFNASDFVNAILAGLTQTNKNM

Specific function: Functional homolog of SRP receptor. Probably involved in the reception and insertion of a subset of proteins at the membrane [H]

COG id: COG0552

COG function: function code U; Signal recognition particle GTPase

Gene ontology:

Cell location: Cell membrane; Peripheral membrane protein [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the GTP-binding SRP family [H]

Homologues:

Organism=Homo sapiens, GI4507215, Length=292, Percent_Identity=31.8493150684932, Blast_Score=121, Evalue=1e-27,
Organism=Homo sapiens, GI226371618, Length=204, Percent_Identity=33.8235294117647, Blast_Score=117, Evalue=2e-26,
Organism=Homo sapiens, GI295424842, Length=223, Percent_Identity=31.8385650224215, Blast_Score=105, Evalue=5e-23,
Organism=Homo sapiens, GI23308697, Length=223, Percent_Identity=31.8385650224215, Blast_Score=105, Evalue=5e-23,
Organism=Homo sapiens, GI89061728, Length=136, Percent_Identity=32.3529411764706, Blast_Score=72, Evalue=9e-13,
Organism=Escherichia coli, GI1789874, Length=307, Percent_Identity=39.7394136807818, Blast_Score=201, Evalue=6e-53,
Organism=Escherichia coli, GI1788963, Length=297, Percent_Identity=26.9360269360269, Blast_Score=122, Evalue=4e-29,
Organism=Caenorhabditis elegans, GI17539958, Length=229, Percent_Identity=32.3144104803493, Blast_Score=114, Evalue=8e-26,
Organism=Caenorhabditis elegans, GI193206261, Length=223, Percent_Identity=30.4932735426009, Blast_Score=101, Evalue=5e-22,
Organism=Saccharomyces cerevisiae, GI6325345, Length=201, Percent_Identity=33.3333333333333, Blast_Score=121, Evalue=1e-28,
Organism=Saccharomyces cerevisiae, GI6320498, Length=229, Percent_Identity=29.2576419213974, Blast_Score=86, Evalue=1e-17,
Organism=Drosophila melanogaster, GI17647949, Length=301, Percent_Identity=28.5714285714286, Blast_Score=121, Evalue=6e-28,
Organism=Drosophila melanogaster, GI24641198, Length=258, Percent_Identity=28.2945736434109, Blast_Score=103, Evalue=1e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004390
- InterPro:   IPR003593
- InterPro:   IPR000897
- InterPro:   IPR013822 [H]

Pfam domain/function: PF00448 SRP54; PF02881 SRP54_N [H]

EC number: NA

Molecular weight: Translated: 34676; Mature: 34676

Theoretical pI: Translated: 9.01; Mature: 9.01

Prosite motif: PS00300 SRP54

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKFMSSWLNKLTAAVSKTTNKLTVQITKLFSEKTITKESIEQLEEVLLSADFGVTATNNI
CCHHHHHHHHHHHHHHHCCCEEEEEEEEHHHHCCCCHHHHHHHHHHHHHCCCCCEEHHHH
IENFKTIKFNKNIQLDDIKSELAKSIIKFAFPNGNPELHIKPGVLNVMIICGINGNGKTT
HHCCEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEECCEEEEEEEEEECCCCCEE
TIGKLSHYYNLQGQKVAIAACDTFRAAATEQLEIWANRSGSYLFKGNPGADPASVAYQAA
EEEHHHHEECCCCCEEEEEECCCHHHHCCCEEEEEECCCCCEEECCCCCCCHHHHHHHHC
GWAIDNKMNILFIDTAGRLHNHKNLMDQLKKIKKVINQYHSSSVCYTLLTLDATNGQNAF
CEEECCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEECCCCCHHH
TQVEQFQDIVLLDGVIITKLDSTSKAGVAVGIAEKFKIPIYFIGIGEQIDDIKEFNASDF
HHHHHHHCCCEECCEEEEEECCCCCCCEEEEEHHHEECCEEEEECCCHHHHHHHCCHHHH
VNAILAGLTQTNKNM
HHHHHHHHHHCCCCC
>Mature Secondary Structure
MKFMSSWLNKLTAAVSKTTNKLTVQITKLFSEKTITKESIEQLEEVLLSADFGVTATNNI
CCHHHHHHHHHHHHHHHCCCEEEEEEEEHHHHCCCCHHHHHHHHHHHHHCCCCCEEHHHH
IENFKTIKFNKNIQLDDIKSELAKSIIKFAFPNGNPELHIKPGVLNVMIICGINGNGKTT
HHCCEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEECCEEEEEEEEEECCCCCEE
TIGKLSHYYNLQGQKVAIAACDTFRAAATEQLEIWANRSGSYLFKGNPGADPASVAYQAA
EEEHHHHEECCCCCEEEEEECCCHHHHCCCEEEEEECCCCCEEECCCCCCCHHHHHHHHC
GWAIDNKMNILFIDTAGRLHNHKNLMDQLKKIKKVINQYHSSSVCYTLLTLDATNGQNAF
CEEECCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEECCCCCHHH
TQVEQFQDIVLLDGVIITKLDSTSKAGVAVGIAEKFKIPIYFIGIGEQIDDIKEFNASDF
HHHHHHHCCCEECCEEEEEECCCCCCCEEEEEHHHEECCEEEEECCCHHHHHHHCCHHHH
VNAILAGLTQTNKNM
HHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11557893 [H]