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The map label for this gene is ybeY [C]

Identifier: 189183988

GI number: 189183988

Start: 1114352

End: 1114855

Strand: Direct

Name: ybeY [C]

Synonym: OTT_1081

Alternate gene names: 189183988

Gene position: 1114352-1114855 (Clockwise)

Preceding gene: 189183987

Following gene: 189183989

Centisome position: 55.47

GC content: 27.58

Gene sequence:

>504_bases
ATGAAAATTAAAGCTGCTCTTATTCGACAACACTCAATTTGGCGCAATCATAAGGAAATTAATTTATGTTATGTTAAAAA
AATTATAAAAACAACTTTATACCATAACATTTTTGCAAAGTTGCAATCAGTGCAGCAAGCTGAAGTTGCAATTTTATTAA
CTAATGATCATGAAATGCAGAACTTAAATTTTACTCATAGAAAAATTAATAAACCAACAAATGTTCTATCATTTCCAGAT
CAAGTTCTTGATTGGCAAAATTTATCTACTTTAGACATACAGGATAACTATATTTATTTAGGAGACATTGCATTTGGATA
TAATACAATTGCTAAAGAAGCAGTAGAACAACAAAAAACTTTTATTAACCATTTTACTCATTTGCTAATACATGCAATAT
TACATTTACTAGGGTTTGATCATCAACACGACAGTGAAGCTATAATTATGGAAGAGTTAGAAGTTAATTTACTTGCTAAA
TTTAGTATAGCATCACCATATTAG

Upstream 100 bases:

>100_bases
TTTAAATAACTATTTTCATTTTCATTAATTTATATTAGAATGACAATATATGGTTAATATTTTAAGTTGGCATTATTATA
GTTAGAAAACTAACAGTGAT

Downstream 100 bases:

>100_bases
TAAGTATAACTGATGCAACTTAAACCTTTAGATAAAAAAGCAAAAAAGCACGTTATTGCCCATTATATAACAGCATTAAA
AAACTGGTGTTTCCAAATTT

Product: putative metalloprotease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 167; Mature: 167

Protein sequence:

>167_residues
MKIKAALIRQHSIWRNHKEINLCYVKKIIKTTLYHNIFAKLQSVQQAEVAILLTNDHEMQNLNFTHRKINKPTNVLSFPD
QVLDWQNLSTLDIQDNYIYLGDIAFGYNTIAKEAVEQQKTFINHFTHLLIHAILHLLGFDHQHDSEAIIMEELEVNLLAK
FSIASPY

Sequences:

>Translated_167_residues
MKIKAALIRQHSIWRNHKEINLCYVKKIIKTTLYHNIFAKLQSVQQAEVAILLTNDHEMQNLNFTHRKINKPTNVLSFPD
QVLDWQNLSTLDIQDNYIYLGDIAFGYNTIAKEAVEQQKTFINHFTHLLIHAILHLLGFDHQHDSEAIIMEELEVNLLAK
FSIASPY
>Mature_167_residues
MKIKAALIRQHSIWRNHKEINLCYVKKIIKTTLYHNIFAKLQSVQQAEVAILLTNDHEMQNLNFTHRKINKPTNVLSFPD
QVLDWQNLSTLDIQDNYIYLGDIAFGYNTIAKEAVEQQKTFINHFTHLLIHAILHLLGFDHQHDSEAIIMEELEVNLLAK
FSIASPY

Specific function: Involved in rRNA and/or ribosome maturation and assembly. Required for normal 5' and 3' processing of 16S, 23S and 5S rRNAs. May have metal-dependent hydrolase activity [H]

COG id: COG0319

COG function: function code R; Predicted metal-dependent hydrolase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rRNA maturation factor YbeY family [H]

Homologues:

Organism=Escherichia coli, GI1786880, Length=123, Percent_Identity=38.2113821138211, Blast_Score=78, Evalue=3e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR023091
- InterPro:   IPR020549
- InterPro:   IPR002036 [H]

Pfam domain/function: PF02130 UPF0054 [H]

EC number: NA

Molecular weight: Translated: 19477; Mature: 19477

Theoretical pI: Translated: 7.13; Mature: 7.13

Prosite motif: PS01306 UPF0054

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIKAALIRQHSIWRNHKEINLCYVKKIIKTTLYHNIFAKLQSVQQAEVAILLTNDHEMQ
CCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEEECCCCCC
NLNFTHRKINKPTNVLSFPDQVLDWQNLSTLDIQDNYIYLGDIAFGYNTIAKEAVEQQKT
CCCCHHHHCCCCCCCCCCCHHHHCCCCCCEEEECCCEEEEEEEHHCHHHHHHHHHHHHHH
FINHFTHLLIHAILHLLGFDHQHDSEAIIMEELEVNLLAKFSIASPY
HHHHHHHHHHHHHHHHHCCCCCCCCCEEEHHHHHHHHHEEEECCCCC
>Mature Secondary Structure
MKIKAALIRQHSIWRNHKEINLCYVKKIIKTTLYHNIFAKLQSVQQAEVAILLTNDHEMQ
CCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEEECCCCCC
NLNFTHRKINKPTNVLSFPDQVLDWQNLSTLDIQDNYIYLGDIAFGYNTIAKEAVEQQKT
CCCCHHHHCCCCCCCCCCCHHHHCCCCCCEEEECCCEEEEEEEHHCHHHHHHHHHHHHHH
FINHFTHLLIHAILHLLGFDHQHDSEAIIMEELEVNLLAKFSIASPY
HHHHHHHHHHHHHHHHHCCCCCCCCCEEEHHHHHHHHHEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA