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The map label for this gene is intD [C]

Identifier: 189183912

GI number: 189183912

Start: 1052195

End: 1052641

Strand: Direct

Name: intD [C]

Synonym: OTT_1005

Alternate gene names: 189183912

Gene position: 1052195-1052641 (Clockwise)

Preceding gene: 189183911

Following gene: 189183913

Centisome position: 52.37

GC content: 33.78

Gene sequence:

>447_bases
ATGGAATGGGACAATATAGATTTTGAAAGAAAAATATGGCATATACCAAAAACTAAGAACGGAAAGGCGCAAAATATACC
ATTAACAGATGAGGCAATGGAAATATTGCAAGCAAGGAAATTCACATCTGAAAGTAAATGGGTACTACCAAGTGCTACTA
GCGAAAGTGGACACTTATCGCATCCAAATACCGCATGGAAGATAATTTGTAAAAAGGCTAGCATAAAAAATTTCAGAATA
CACGATCTAAGAAGGACGTTTGGAAGTTGTATATCAGATGCAGGTGCAAGTCAGAGAACAATTAGCACAGCATTGAATCA
TATGAATTCAAACTCAACAATGCATTATACTATAGCTTGTATGGAGTTAGTACGACAGTATATGTCTAAGGCTACACAAA
TAATTAATGGATGTGCTAGAAGTTATAATATTTATAATATTATCTGA

Upstream 100 bases:

>100_bases
TAGATTTTTACACGTATTATGTGGAGAAGCGACTCCATTGATAAGAGATTTTGCATTACTAGCGTTATATACTTGAGCTA
GAAAAAGTAATGTGTTGGAG

Downstream 100 bases:

>100_bases
CTAATATAAAAGTTGTGGTAAGAATAGTGCAACTTCATGTCGCACATGCATGTATGTAAACTAATTATTGCAGGTAAAAT
CTGTGTTTGAAGATGTTTAG

Product: putative integrase

Products: NA

Alternate protein names: Integrase Family Protein; Phage-Related Integrase; Phage Related Integrase; Phage Integrase Family Protein; Phage Integrase; Site Specific Recombinase

Number of amino acids: Translated: 148; Mature: 148

Protein sequence:

>148_residues
MEWDNIDFERKIWHIPKTKNGKAQNIPLTDEAMEILQARKFTSESKWVLPSATSESGHLSHPNTAWKIICKKASIKNFRI
HDLRRTFGSCISDAGASQRTISTALNHMNSNSTMHYTIACMELVRQYMSKATQIINGCARSYNIYNII

Sequences:

>Translated_148_residues
MEWDNIDFERKIWHIPKTKNGKAQNIPLTDEAMEILQARKFTSESKWVLPSATSESGHLSHPNTAWKIICKKASIKNFRI
HDLRRTFGSCISDAGASQRTISTALNHMNSNSTMHYTIACMELVRQYMSKATQIINGCARSYNIYNII
>Mature_148_residues
MEWDNIDFERKIWHIPKTKNGKAQNIPLTDEAMEILQARKFTSESKWVLPSATSESGHLSHPNTAWKIICKKASIKNFRI
HDLRRTFGSCISDAGASQRTISTALNHMNSNSTMHYTIACMELVRQYMSKATQIINGCARSYNIYNII

Specific function: Integrase From The Cryptic Lambdoic Prophage Dlp12. Integrase Is Necessary For Integration Of The Phage Into The Host Genome By Site-Specific Recombination. In Conjunction With Excisionase, Integrase Is Also Necessary For Excision Of The Prophage From Th

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16921; Mature: 16921

Theoretical pI: Translated: 9.78; Mature: 9.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
6.8 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
6.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEWDNIDFERKIWHIPKTKNGKAQNIPLTDEAMEILQARKFTSESKWVLPSATSESGHLS
CCCCCCCHHHHEEECCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCEECCCCCCCCCCCC
HPNTAWKIICKKASIKNFRIHDLRRTFGSCISDAGASQRTISTALNHMNSNSTMHYTIAC
CCCHHHHEEECCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCEEEHHHHH
MELVRQYMSKATQIINGCARSYNIYNII
HHHHHHHHHHHHHHHHHHHHCCCEEECC
>Mature Secondary Structure
MEWDNIDFERKIWHIPKTKNGKAQNIPLTDEAMEILQARKFTSESKWVLPSATSESGHLS
CCCCCCCHHHHEEECCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCEECCCCCCCCCCCC
HPNTAWKIICKKASIKNFRIHDLRRTFGSCISDAGASQRTISTALNHMNSNSTMHYTIAC
CCCHHHHEEECCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCEEEHHHHH
MELVRQYMSKATQIINGCARSYNIYNII
HHHHHHHHHHHHHHHHHHHHCCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA