| Definition | Orientia tsutsugamushi str. Ikeda, complete genome. |
|---|---|
| Accession | NC_010793 |
| Length | 2,008,987 |
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The map label for this gene is 189183913
Identifier: 189183913
GI number: 189183913
Start: 1052779
End: 1053102
Strand: Direct
Name: 189183913
Synonym: OTT_1006
Alternate gene names: NA
Gene position: 1052779-1053102 (Clockwise)
Preceding gene: 189183912
Following gene: 189183914
Centisome position: 52.4
GC content: 36.42
Gene sequence:
>324_bases ATGCTACAATTGCGGCTAAAGGTGATTATGCAAAATCAAAAATTATGTTGGGCGTTATCGAGGCCGTTGAAGTATATGGG TTTGAGCATTGATGAATGGGGAGTAGTATTAGCTGGAGTAGCTCCAGGAATTGTACTACTAAACAGTAGGCATGCTAAAT TAGGCCTAGCATTTATGGTTGGAGGAATTGCTCTATGTTATTGCTTTAAGAAATTTAAGAAGGTATCGGAGAATTTTTTG CTAAAAAGTTTTTTAGTAGCTAAAGGTTTATTGCTAGCTCCATTAGGATATTCAAGATTGCTGGGCAAAAAAGTTGGCAA ATAA
Upstream 100 bases:
>100_bases TGTCGCACATGCATGTATGTAAACTAATTATTGCAGGTAAAATCTGTGTTTGAAGATGTTTAGCTAATTTAAACATTATA GTAGCAGAATGAGAAATCTC
Downstream 100 bases:
>100_bases TGAATCATCTCTTTAAGCAAAATGCTATACAAGAGCTGGTTAAATATAATAAATGCTTACTTTCAGTAACTATATTGCTA GCTGCAGCTAATATAATTGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 107; Mature: 107
Protein sequence:
>107_residues MLQLRLKVIMQNQKLCWALSRPLKYMGLSIDEWGVVLAGVAPGIVLLNSRHAKLGLAFMVGGIALCYCFKKFKKVSENFL LKSFLVAKGLLLAPLGYSRLLGKKVGK
Sequences:
>Translated_107_residues MLQLRLKVIMQNQKLCWALSRPLKYMGLSIDEWGVVLAGVAPGIVLLNSRHAKLGLAFMVGGIALCYCFKKFKKVSENFL LKSFLVAKGLLLAPLGYSRLLGKKVGK >Mature_107_residues MLQLRLKVIMQNQKLCWALSRPLKYMGLSIDEWGVVLAGVAPGIVLLNSRHAKLGLAFMVGGIALCYCFKKFKKVSENFL LKSFLVAKGLLLAPLGYSRLLGKKVGK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11823; Mature: 11823
Theoretical pI: Translated: 10.91; Mature: 10.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 6.5 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 6.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLQLRLKVIMQNQKLCWALSRPLKYMGLSIDEWGVVLAGVAPGIVLLNSRHAKLGLAFMV CCEEHEEHHHCCCHHHHHHHCCHHHHCCCCCCHHHHHCCCCCCEEEECCCCHHHHHHHHH GGIALCYCFKKFKKVSENFLLKSFLVAKGLLLAPLGYSRLLGKKVGK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCC >Mature Secondary Structure MLQLRLKVIMQNQKLCWALSRPLKYMGLSIDEWGVVLAGVAPGIVLLNSRHAKLGLAFMV CCEEHEEHHHCCCHHHHHHHCCHHHHCCCCCCHHHHHCCCCCCEEEECCCCHHHHHHHHH GGIALCYCFKKFKKVSENFLLKSFLVAKGLLLAPLGYSRLLGKKVGK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA