| Definition | Orientia tsutsugamushi str. Ikeda, complete genome. |
|---|---|
| Accession | NC_010793 |
| Length | 2,008,987 |
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The map label for this gene is 189183832
Identifier: 189183832
GI number: 189183832
Start: 966065
End: 966403
Strand: Reverse
Name: 189183832
Synonym: OTT_0925
Alternate gene names: NA
Gene position: 966403-966065 (Counterclockwise)
Preceding gene: 189183834
Following gene: 189183826
Centisome position: 48.1
GC content: 23.01
Gene sequence:
>339_bases ATGTCACATCCACTTCAACATTATTGGTATTTAGATTCTATAACAAATTCTATATTCATTAATCTTAAAGTAAAAGCAGG GGCTAAAATCAATAAAATTATAGGATTATATTATATAAATAACAAAAGCTTTTTATATATTAGCATTAATACAATACCTG AAAATAATAAAGCTAATCAAGCAATTATAAAATTTCTATCACAATGGCTTGAAGTATGCAGATCAAATATCAAGATAGTT TATGGCTTGCATAGTAATTTAAAAGTTATATCAGTAATAAATACTAATGCTAACATTTCTAATCTTATTAGAAGTAAATT AAAAAGTATCCATCTATAG
Upstream 100 bases:
>100_bases AAAGTGATATTAATTTAAAAAATACGGTAAATATTATATACTGACTTTGCAAAAAACTATAACAAAAGTTAAATAGCTAC TTTTTAATCATAGACGATAT
Downstream 100 bases:
>100_bases GTGAATAATATGAAACATTATATTAATTTTACATTTAAAAAAATTGATTAATAATCTCCTTAACCTGCTCTACACTTGTT ATAGTAGTAACTTTAGACCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 112; Mature: 111
Protein sequence:
>112_residues MSHPLQHYWYLDSITNSIFINLKVKAGAKINKIIGLYYINNKSFLYISINTIPENNKANQAIIKFLSQWLEVCRSNIKIV YGLHSNLKVISVINTNANISNLIRSKLKSIHL
Sequences:
>Translated_112_residues MSHPLQHYWYLDSITNSIFINLKVKAGAKINKIIGLYYINNKSFLYISINTIPENNKANQAIIKFLSQWLEVCRSNIKIV YGLHSNLKVISVINTNANISNLIRSKLKSIHL >Mature_111_residues SHPLQHYWYLDSITNSIFINLKVKAGAKINKIIGLYYINNKSFLYISINTIPENNKANQAIIKFLSQWLEVCRSNIKIVY GLHSNLKVISVINTNANISNLIRSKLKSIHL
Specific function: Unknown
COG id: COG1872
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12858; Mature: 12727
Theoretical pI: Translated: 10.50; Mature: 10.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSHPLQHYWYLDSITNSIFINLKVKAGAKINKIIGLYYINNKSFLYISINTIPENNKANQ CCCCCHHEEEEECCCCEEEEEEEEECCCCEEEEEEEEEECCCEEEEEEEEECCCCCCCHH AIIKFLSQWLEVCRSNIKIVYGLHSNLKVISVINTNANISNLIRSKLKSIHL HHHHHHHHHHHHHHCCCEEEEEECCCEEEEEEEECCCCHHHHHHHHHHHCCC >Mature Secondary Structure SHPLQHYWYLDSITNSIFINLKVKAGAKINKIIGLYYINNKSFLYISINTIPENNKANQ CCCCHHEEEEECCCCEEEEEEEEECCCCEEEEEEEEEECCCEEEEEEEEECCCCCCCHH AIIKFLSQWLEVCRSNIKIVYGLHSNLKVISVINTNANISNLIRSKLKSIHL HHHHHHHHHHHHHHCCCEEEEEECCCEEEEEEEECCCCHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA