Definition Orientia tsutsugamushi str. Ikeda, complete genome.
Accession NC_010793
Length 2,008,987

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The map label for this gene is 189183826

Identifier: 189183826

GI number: 189183826

Start: 961019

End: 961486

Strand: Reverse

Name: 189183826

Synonym: OTT_0919

Alternate gene names: NA

Gene position: 961486-961019 (Counterclockwise)

Preceding gene: 189183832

Following gene: 189183825

Centisome position: 47.86

GC content: 33.76

Gene sequence:

>468_bases
ATGTTATATACTTTTCGAAAAGCATGTTTACGTCACTTAGATCAGATTAAAGAGTTAAAGGATGAAAAATTTCGTCGATT
AACAGGAGTAAGGAAGAGGACATTTTCAAAGATGGTGGATATTTTGAGGAAAGCTGATGGTCTTAAGAAATCAAAAGGTG
GACGTAAAAATAAGCTCAATTTGGAGGAACAGTTGCTGATGGTCTTAGAATACCTTAGAGAATACCGTACTTATTTCCAT
ATAGGTCAGAACTATGGAATTAGTGAAAGTTCAGCATATAAAGCTGTAAAATGGGTAGAAGACACCCTAGTTAAACACCC
AAACTTTGCTCTTACAGGCAGTAAAGCTTTAATGAAGAGTGATATGAATTATGAAGTAGTCTTGATTGATGCTACTGAGA
GTCCTATAGAAAGACCTAAAAAAAACAAAAATTCTATTATTCAGGAAAGAAGAAAAGGCATACACTAA

Upstream 100 bases:

>100_bases
ATACAAGACATATGGTAGATGATTATGAGAATAATCATTATAAGTACAGTTTAACATAGTGCGATATGAGGTTACATAGC
TGACCAAGTACAAAACAGTT

Downstream 100 bases:

>100_bases
AAACTCAAATAGTGGTAGATAAGAAAACGCGCCAAGTAATATGTACAGATTTTTCTAACGGTAAAAAACATGACTTTAGA
TTATTTAAGAAATCCAAAAT

Product: transposase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 155; Mature: 155

Protein sequence:

>155_residues
MLYTFRKACLRHLDQIKELKDEKFRRLTGVRKRTFSKMVDILRKADGLKKSKGGRKNKLNLEEQLLMVLEYLREYRTYFH
IGQNYGISESSAYKAVKWVEDTLVKHPNFALTGSKALMKSDMNYEVVLIDATESPIERPKKNKNSIIQERRKGIH

Sequences:

>Translated_155_residues
MLYTFRKACLRHLDQIKELKDEKFRRLTGVRKRTFSKMVDILRKADGLKKSKGGRKNKLNLEEQLLMVLEYLREYRTYFH
IGQNYGISESSAYKAVKWVEDTLVKHPNFALTGSKALMKSDMNYEVVLIDATESPIERPKKNKNSIIQERRKGIH
>Mature_155_residues
MLYTFRKACLRHLDQIKELKDEKFRRLTGVRKRTFSKMVDILRKADGLKKSKGGRKNKLNLEEQLLMVLEYLREYRTYFH
IGQNYGISESSAYKAVKWVEDTLVKHPNFALTGSKALMKSDMNYEVVLIDATESPIERPKKNKNSIIQERRKGIH

Specific function: Involved in the transposition of the insertion sequence [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transposase 11 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002559 [H]

Pfam domain/function: PF01609 Transposase_11 [H]

EC number: NA

Molecular weight: Translated: 18251; Mature: 18251

Theoretical pI: Translated: 10.56; Mature: 10.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLYTFRKACLRHLDQIKELKDEKFRRLTGVRKRTFSKMVDILRKADGLKKSKGGRKNKLN
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCCCCC
LEEQLLMVLEYLREYRTYFHIGQNYGISESSAYKAVKWVEDTLVKHPNFALTGSKALMKS
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCEECCCHHHHHC
DMNYEVVLIDATESPIERPKKNKNSIIQERRKGIH
CCCEEEEEEECCCCHHHCCCCCHHHHHHHHHHCCC
>Mature Secondary Structure
MLYTFRKACLRHLDQIKELKDEKFRRLTGVRKRTFSKMVDILRKADGLKKSKGGRKNKLN
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCCCCC
LEEQLLMVLEYLREYRTYFHIGQNYGISESSAYKAVKWVEDTLVKHPNFALTGSKALMKS
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCEECCCHHHHHC
DMNYEVVLIDATESPIERPKKNKNSIIQERRKGIH
CCCEEEEEEECCCCHHHCCCCCHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1662761 [H]