Definition Orientia tsutsugamushi str. Ikeda, complete genome.
Accession NC_010793
Length 2,008,987

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The map label for this gene is 189183824

Identifier: 189183824

GI number: 189183824

Start: 959381

End: 960142

Strand: Reverse

Name: 189183824

Synonym: OTT_0917

Alternate gene names: NA

Gene position: 960142-959381 (Counterclockwise)

Preceding gene: 189183825

Following gene: 189183817

Centisome position: 47.79

GC content: 31.76

Gene sequence:

>762_bases
TTGAAATTAGTCCATAAAATCTTAGCAAAGAGTCAAGTAAATAATTATATGAATACAAGAATTAAAAAGGTACTATTAGC
TGTTACTATGTTATCACTTTATTCATTTCCATCGGTAGCATCAGATATAGAATGTTATGGTAGAAATTATTATTTAAAAA
TATCTATGGGAATAACTAAGCCTACAGGGCAGTTTAGTATCGAGAATTCTAAAAATATCTTAGACAATGATTGGAGTACT
AATCTTCAAATGATAAATGATGCTATTACTAATAGAAGTAGTACAATTTATGGAATGTCTCTTGGTATGCATTGTACTCA
ATCAATAAGATTAGAACTAGGAGGGCAGTATATAAAGAATCTTCAATTTGGAGGTGATATTGAGGCAGTAGATCAAAACA
TTAAAGTTAGTAATCATAAGATAGGTTCTGATATAGAAGGCGGTATCTCTGGTATTGCCGGAATGATTAAGGTGTACTGG
AATATAATTAGTGTATTTGATATAGTATCTGCTTTCGCTACTGGAGGTTTGAGTATGTATGGTCTTAATATGTCACATGA
GCCAATGTCGGTTTTTCCTGGTTTTTTAGTTGGAGGAGGTGTATCACTTAATATAAGCCGTATACATTTTGGTCTTGAGT
GTAATTATACAAGCTTGAGCGTAAAAGAGAATTTAAAGATTAACTCGCAATCATTAGGTCAGCTGAAGTTGAATAATTTG
TATGGCTATAACATATTAGGCAGTGTATGGGTTGATTTCTAG

Upstream 100 bases:

>100_bases
ATTATTTATGGTGTTTTAAAGCATAATTCTCCTTTTAGTGCCAATGATTAAATCAAATTTTGATTGTTATTTTATTAAGT
TAAATGTACAATAAGGTTCT

Downstream 100 bases:

>100_bases
GTTTTTGTTTATAAAAATTTGTAAATTTAGGAATTTTAAAAAGCATCAAAACCATATGCTTATTGTGCTGATGGTTTCTA
TTCTTTGATGTATTAGCATC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 253; Mature: 253

Protein sequence:

>253_residues
MKLVHKILAKSQVNNYMNTRIKKVLLAVTMLSLYSFPSVASDIECYGRNYYLKISMGITKPTGQFSIENSKNILDNDWST
NLQMINDAITNRSSTIYGMSLGMHCTQSIRLELGGQYIKNLQFGGDIEAVDQNIKVSNHKIGSDIEGGISGIAGMIKVYW
NIISVFDIVSAFATGGLSMYGLNMSHEPMSVFPGFLVGGGVSLNISRIHFGLECNYTSLSVKENLKINSQSLGQLKLNNL
YGYNILGSVWVDF

Sequences:

>Translated_253_residues
MKLVHKILAKSQVNNYMNTRIKKVLLAVTMLSLYSFPSVASDIECYGRNYYLKISMGITKPTGQFSIENSKNILDNDWST
NLQMINDAITNRSSTIYGMSLGMHCTQSIRLELGGQYIKNLQFGGDIEAVDQNIKVSNHKIGSDIEGGISGIAGMIKVYW
NIISVFDIVSAFATGGLSMYGLNMSHEPMSVFPGFLVGGGVSLNISRIHFGLECNYTSLSVKENLKINSQSLGQLKLNNL
YGYNILGSVWVDF
>Mature_253_residues
MKLVHKILAKSQVNNYMNTRIKKVLLAVTMLSLYSFPSVASDIECYGRNYYLKISMGITKPTGQFSIENSKNILDNDWST
NLQMINDAITNRSSTIYGMSLGMHCTQSIRLELGGQYIKNLQFGGDIEAVDQNIKVSNHKIGSDIEGGISGIAGMIKVYW
NIISVFDIVSAFATGGLSMYGLNMSHEPMSVFPGFLVGGGVSLNISRIHFGLECNYTSLSVKENLKINSQSLGQLKLNNL
YGYNILGSVWVDF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27924; Mature: 27924

Theoretical pI: Translated: 8.71; Mature: 8.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLVHKILAKSQVNNYMNTRIKKVLLAVTMLSLYSFPSVASDIECYGRNYYLKISMGITK
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCEEEEEEECCCC
PTGQFSIENSKNILDNDWSTNLQMINDAITNRSSTIYGMSLGMHCTQSIRLELGGQYIKN
CCCCEEECCCCCCCCCCCCCHHHHHHHHHCCCCCEEEEEEECCHHHHHHHHHHCHHHHHC
LQFGGDIEAVDQNIKVSNHKIGSDIEGGISGIAGMIKVYWNIISVFDIVSAFATGGLSMY
CCCCCCHHHHCCCEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEE
GLNMSHEPMSVFPGFLVGGGVSLNISRIHFGLECNYTSLSVKENLKINSQSLGQLKLNNL
ECCCCCCCHHHCCCCEECCCEEEEEEEEEEEEEECCEEEEECCCCEECCCCCCEEEECCC
YGYNILGSVWVDF
CCCCCCEEEEECC
>Mature Secondary Structure
MKLVHKILAKSQVNNYMNTRIKKVLLAVTMLSLYSFPSVASDIECYGRNYYLKISMGITK
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCEEEEEEECCCC
PTGQFSIENSKNILDNDWSTNLQMINDAITNRSSTIYGMSLGMHCTQSIRLELGGQYIKN
CCCCEEECCCCCCCCCCCCCHHHHHHHHHCCCCCEEEEEEECCHHHHHHHHHHCHHHHHC
LQFGGDIEAVDQNIKVSNHKIGSDIEGGISGIAGMIKVYWNIISVFDIVSAFATGGLSMY
CCCCCCHHHHCCCEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEE
GLNMSHEPMSVFPGFLVGGGVSLNISRIHFGLECNYTSLSVKENLKINSQSLGQLKLNNL
ECCCCCCCHHHCCCCEECCCEEEEEEEEEEEEEECCEEEEECCCCEECCCCCCEEEECCC
YGYNILGSVWVDF
CCCCCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA