Click here to switch to the map view.

The map label for this gene is 189183825

Identifier: 189183825

GI number: 189183825

Start: 960633

End: 961007

Strand: Reverse

Name: 189183825

Synonym: OTT_0918

Alternate gene names: NA

Gene position: 961007-960633 (Counterclockwise)

Preceding gene: 189183826

Following gene: 189183824

Centisome position: 47.84

GC content: 29.07

Gene sequence:

>375_bases
GTGGTAGATAAGAAAACGCGCCAAGTAATATGTACAGATTTTTCTAACGGTAAAAAACATGACTTTAGATTATTTAAGAA
ATCCAAAATTCTTATCCATCCTAAGGTAAAAGTGATTACTGATACAGGATATCAAGGCATACAAAAAATTCACAATAATT
CTGAATTACCAAAGAAAAAAAGCAAGAAAAATCCTTTAACTAAAAATGATAAAAAGAATAATCATAGGTTAGCAGGAGCA
AGAGTTGTGAATGAAAACGTTATTGGTATGCTAAAACGCTTCAAAATTATTGCTGACAAATATCGAAATAGACGTAAAAG
ATTCGGTCTTAGATTTAATTTTACCTCTGGCATTTATAATTTTGAACTACGTTAA

Upstream 100 bases:

>100_bases
TCTTGATTGATGCTACTGAGAGTCCTATAGAAAGACCTAAAAAAAACAAAAATTCTATTATTCAGGAAAGAAGAAAAGGC
ATACACTAAAAACTCAAATA

Downstream 100 bases:

>100_bases
CCAGTTTCGAAAGAGGTCTAATATTTAAATCAGAAGAATAAGAAAGTAAATCTCTAATATATATCCATCTTCTTTTATCA
TGATTTTTAAATGCTTGCTT

Product: transposase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 124; Mature: 124

Protein sequence:

>124_residues
MVDKKTRQVICTDFSNGKKHDFRLFKKSKILIHPKVKVITDTGYQGIQKIHNNSELPKKKSKKNPLTKNDKKNNHRLAGA
RVVNENVIGMLKRFKIIADKYRNRRKRFGLRFNFTSGIYNFELR

Sequences:

>Translated_124_residues
MVDKKTRQVICTDFSNGKKHDFRLFKKSKILIHPKVKVITDTGYQGIQKIHNNSELPKKKSKKNPLTKNDKKNNHRLAGA
RVVNENVIGMLKRFKIIADKYRNRRKRFGLRFNFTSGIYNFELR
>Mature_124_residues
MVDKKTRQVICTDFSNGKKHDFRLFKKSKILIHPKVKVITDTGYQGIQKIHNNSELPKKKSKKNPLTKNDKKNNHRLAGA
RVVNENVIGMLKRFKIIADKYRNRRKRFGLRFNFTSGIYNFELR

Specific function: Involved in the transposition of the insertion sequence [H]

COG id: COG3293

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transposase 11 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002559 [H]

Pfam domain/function: PF01609 Transposase_11 [H]

EC number: NA

Molecular weight: Translated: 14645; Mature: 14645

Theoretical pI: Translated: 11.48; Mature: 11.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVDKKTRQVICTDFSNGKKHDFRLFKKSKILIHPKVKVITDTGYQGIQKIHNNSELPKKK
CCCCCCCEEEEECCCCCCCCCEEEEECCEEEECCCEEEEECCCHHHHHHHHCCCCCCCCC
SKKNPLTKNDKKNNHRLAGARVVNENVIGMLKRFKIIADKYRNRRKRFGLRFNFTSGIYN
CCCCCCCCCCCCCCCEEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCEEE
FELR
EEEC
>Mature Secondary Structure
MVDKKTRQVICTDFSNGKKHDFRLFKKSKILIHPKVKVITDTGYQGIQKIHNNSELPKKK
CCCCCCCEEEEECCCCCCCCCEEEEECCEEEECCCEEEEECCCHHHHHHHHCCCCCCCCC
SKKNPLTKNDKKNNHRLAGARVVNENVIGMLKRFKIIADKYRNRRKRFGLRFNFTSGIYN
CCCCCCCCCCCCCCCEEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCEEE
FELR
EEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1662761 [H]