| Definition | Orientia tsutsugamushi str. Ikeda, complete genome. |
|---|---|
| Accession | NC_010793 |
| Length | 2,008,987 |
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The map label for this gene is 189183810
Identifier: 189183810
GI number: 189183810
Start: 942914
End: 943468
Strand: Reverse
Name: 189183810
Synonym: OTT_0903
Alternate gene names: NA
Gene position: 943468-942914 (Counterclockwise)
Preceding gene: 189183811
Following gene: 189183809
Centisome position: 46.96
GC content: 29.19
Gene sequence:
>555_bases GTGGATAGCAACAATTATAAGACTAATTTAATTATCAAAGCAGTTAATCACGATAATGTCATTATTAGCGGATATGCTAC TGTTTTTAATCTTGTTGACAGTTCTGGAGACTATATTCTTAAAGGAGCATTTAAAAATATTCATCATCGATATCTATCTG ATATTAAATTACTATGGCAACATAATATTGCTTCTCCTATTGGCTTAATTACTAATATAGAAGAAGATGAATATGGAGTT AGAGTTGATGCAAGTATTAACCAACATATTCAAAAAGGCAAAGAAGCTACAGCGCTAATTCAACAGGGAGTAATTAACAA TTTTAGCATTGGTTTTACTATTGAAGATTCTAGTTATAACAAAAAGGGAAATAGAATAATAAAATCAGCATTATTATGGG AGGTAAGTTTGGTTACTTTTCCTGCAAATAAACATGCTAAAATACGAAACTGTAAACATACATCTCCATATGATGTTATT AGCTCTAATCAGCTTGTTACCATATTAAATTCATTAATTGAAGCACAAAAGTCGCTAAACAACATAACTCAATAA
Upstream 100 bases:
>100_bases AGTAAATCAAAATACGAATTTTATATATTAGCTATTAGTGCATACCATATTATTGAGTATAGTACCAACTACTTAATAAC CATTATGGAGATAAGTAATA
Downstream 100 bases:
>100_bases TAATCAATATCATGCAAATCGAACAAATTAATAACAAAATTTTAGAATTATCTAATGATTGGTGTAAACATAAAAATGAA TTAGTATCTAAAAACATGAT
Product: hypothetical protein
Products: NA
Alternate protein names: HK97 Family Phage Prohead Protease; Peptidase; Prohead Peptidase; Caudovirus Prohead Protease; Head Maturation Protease; Phage Prohead Protease And Phage Capsid Protein; HK97 Family Phage Prohead Protease/Phage Capsid Protein; Phage Pro-Head Protease
Number of amino acids: Translated: 184; Mature: 184
Protein sequence:
>184_residues MDSNNYKTNLIIKAVNHDNVIISGYATVFNLVDSSGDYILKGAFKNIHHRYLSDIKLLWQHNIASPIGLITNIEEDEYGV RVDASINQHIQKGKEATALIQQGVINNFSIGFTIEDSSYNKKGNRIIKSALLWEVSLVTFPANKHAKIRNCKHTSPYDVI SSNQLVTILNSLIEAQKSLNNITQ
Sequences:
>Translated_184_residues MDSNNYKTNLIIKAVNHDNVIISGYATVFNLVDSSGDYILKGAFKNIHHRYLSDIKLLWQHNIASPIGLITNIEEDEYGV RVDASINQHIQKGKEATALIQQGVINNFSIGFTIEDSSYNKKGNRIIKSALLWEVSLVTFPANKHAKIRNCKHTSPYDVI SSNQLVTILNSLIEAQKSLNNITQ >Mature_184_residues MDSNNYKTNLIIKAVNHDNVIISGYATVFNLVDSSGDYILKGAFKNIHHRYLSDIKLLWQHNIASPIGLITNIEEDEYGV RVDASINQHIQKGKEATALIQQGVINNFSIGFTIEDSSYNKKGNRIIKSALLWEVSLVTFPANKHAKIRNCKHTSPYDVI SSNQLVTILNSLIEAQKSLNNITQ
Specific function: Unknown
COG id: COG3740
COG function: function code R; Phage head maturation protease
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20610; Mature: 20610
Theoretical pI: Translated: 8.92; Mature: 8.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDSNNYKTNLIIKAVNHDNVIISGYATVFNLVDSSGDYILKGAFKNIHHRYLSDIKLLWQ CCCCCEEEEEEEEEECCCCEEEEHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHHHH HNIASPIGLITNIEEDEYGVRVDASINQHIQKGKEATALIQQGVINNFSIGFTIEDSSYN HCCCCCHHHEECCCCCCCCEEEECCHHHHHHCCHHHHHHHHHCCCCCCEEEEEEECCCCC KKGNRIIKSALLWEVSLVTFPANKHAKIRNCKHTSPYDVISSNQLVTILNSLIEAQKSLN CCHHHHHHHHHHHEEEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH NITQ HCCC >Mature Secondary Structure MDSNNYKTNLIIKAVNHDNVIISGYATVFNLVDSSGDYILKGAFKNIHHRYLSDIKLLWQ CCCCCEEEEEEEEEECCCCEEEEHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHHHH HNIASPIGLITNIEEDEYGVRVDASINQHIQKGKEATALIQQGVINNFSIGFTIEDSSYN HCCCCCHHHEECCCCCCCCEEEECCHHHHHHCCHHHHHHHHHCCCCCCEEEEEEECCCCC KKGNRIIKSALLWEVSLVTFPANKHAKIRNCKHTSPYDVISSNQLVTILNSLIEAQKSLN CCHHHHHHHHHHHEEEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH NITQ HCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA