Definition Orientia tsutsugamushi str. Ikeda, complete genome.
Accession NC_010793
Length 2,008,987

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The map label for this gene is 189183810

Identifier: 189183810

GI number: 189183810

Start: 942914

End: 943468

Strand: Reverse

Name: 189183810

Synonym: OTT_0903

Alternate gene names: NA

Gene position: 943468-942914 (Counterclockwise)

Preceding gene: 189183811

Following gene: 189183809

Centisome position: 46.96

GC content: 29.19

Gene sequence:

>555_bases
GTGGATAGCAACAATTATAAGACTAATTTAATTATCAAAGCAGTTAATCACGATAATGTCATTATTAGCGGATATGCTAC
TGTTTTTAATCTTGTTGACAGTTCTGGAGACTATATTCTTAAAGGAGCATTTAAAAATATTCATCATCGATATCTATCTG
ATATTAAATTACTATGGCAACATAATATTGCTTCTCCTATTGGCTTAATTACTAATATAGAAGAAGATGAATATGGAGTT
AGAGTTGATGCAAGTATTAACCAACATATTCAAAAAGGCAAAGAAGCTACAGCGCTAATTCAACAGGGAGTAATTAACAA
TTTTAGCATTGGTTTTACTATTGAAGATTCTAGTTATAACAAAAAGGGAAATAGAATAATAAAATCAGCATTATTATGGG
AGGTAAGTTTGGTTACTTTTCCTGCAAATAAACATGCTAAAATACGAAACTGTAAACATACATCTCCATATGATGTTATT
AGCTCTAATCAGCTTGTTACCATATTAAATTCATTAATTGAAGCACAAAAGTCGCTAAACAACATAACTCAATAA

Upstream 100 bases:

>100_bases
AGTAAATCAAAATACGAATTTTATATATTAGCTATTAGTGCATACCATATTATTGAGTATAGTACCAACTACTTAATAAC
CATTATGGAGATAAGTAATA

Downstream 100 bases:

>100_bases
TAATCAATATCATGCAAATCGAACAAATTAATAACAAAATTTTAGAATTATCTAATGATTGGTGTAAACATAAAAATGAA
TTAGTATCTAAAAACATGAT

Product: hypothetical protein

Products: NA

Alternate protein names: HK97 Family Phage Prohead Protease; Peptidase; Prohead Peptidase; Caudovirus Prohead Protease; Head Maturation Protease; Phage Prohead Protease And Phage Capsid Protein; HK97 Family Phage Prohead Protease/Phage Capsid Protein; Phage Pro-Head Protease

Number of amino acids: Translated: 184; Mature: 184

Protein sequence:

>184_residues
MDSNNYKTNLIIKAVNHDNVIISGYATVFNLVDSSGDYILKGAFKNIHHRYLSDIKLLWQHNIASPIGLITNIEEDEYGV
RVDASINQHIQKGKEATALIQQGVINNFSIGFTIEDSSYNKKGNRIIKSALLWEVSLVTFPANKHAKIRNCKHTSPYDVI
SSNQLVTILNSLIEAQKSLNNITQ

Sequences:

>Translated_184_residues
MDSNNYKTNLIIKAVNHDNVIISGYATVFNLVDSSGDYILKGAFKNIHHRYLSDIKLLWQHNIASPIGLITNIEEDEYGV
RVDASINQHIQKGKEATALIQQGVINNFSIGFTIEDSSYNKKGNRIIKSALLWEVSLVTFPANKHAKIRNCKHTSPYDVI
SSNQLVTILNSLIEAQKSLNNITQ
>Mature_184_residues
MDSNNYKTNLIIKAVNHDNVIISGYATVFNLVDSSGDYILKGAFKNIHHRYLSDIKLLWQHNIASPIGLITNIEEDEYGV
RVDASINQHIQKGKEATALIQQGVINNFSIGFTIEDSSYNKKGNRIIKSALLWEVSLVTFPANKHAKIRNCKHTSPYDVI
SSNQLVTILNSLIEAQKSLNNITQ

Specific function: Unknown

COG id: COG3740

COG function: function code R; Phage head maturation protease

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20610; Mature: 20610

Theoretical pI: Translated: 8.92; Mature: 8.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDSNNYKTNLIIKAVNHDNVIISGYATVFNLVDSSGDYILKGAFKNIHHRYLSDIKLLWQ
CCCCCEEEEEEEEEECCCCEEEEHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHHHH
HNIASPIGLITNIEEDEYGVRVDASINQHIQKGKEATALIQQGVINNFSIGFTIEDSSYN
HCCCCCHHHEECCCCCCCCEEEECCHHHHHHCCHHHHHHHHHCCCCCCEEEEEEECCCCC
KKGNRIIKSALLWEVSLVTFPANKHAKIRNCKHTSPYDVISSNQLVTILNSLIEAQKSLN
CCHHHHHHHHHHHEEEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
NITQ
HCCC
>Mature Secondary Structure
MDSNNYKTNLIIKAVNHDNVIISGYATVFNLVDSSGDYILKGAFKNIHHRYLSDIKLLWQ
CCCCCEEEEEEEEEECCCCEEEEHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHHHH
HNIASPIGLITNIEEDEYGVRVDASINQHIQKGKEATALIQQGVINNFSIGFTIEDSSYN
HCCCCCHHHEECCCCCCCCEEEECCHHHHHHCCHHHHHHHHHCCCCCCEEEEEEECCCCC
KKGNRIIKSALLWEVSLVTFPANKHAKIRNCKHTSPYDVISSNQLVTILNSLIEAQKSLN
CCHHHHHHHHHHHEEEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
NITQ
HCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA