Definition Orientia tsutsugamushi str. Ikeda, complete genome.
Accession NC_010793
Length 2,008,987

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The map label for this gene is 189183811

Identifier: 189183811

GI number: 189183811

Start: 944140

End: 945096

Strand: Reverse

Name: 189183811

Synonym: OTT_0904

Alternate gene names: NA

Gene position: 945096-944140 (Counterclockwise)

Preceding gene: 189183812

Following gene: 189183810

Centisome position: 47.04

GC content: 33.12

Gene sequence:

>957_bases
ATGATTACTTTAACCAGTACGCTGCAAAGCACTGTATATTTTTTAGAATGGACAACAGATACAGTATTATCAGAGATTAA
AGATTATGCCCAAGGTGTTAAGGATGATACATCAGAGTTTTATTGTAGCTTTTCTAAAGAAACAAAAGAAGGTTGCGAAA
AAATAAAAAATGTTATTTACGGAGATGAGTTTCATGGTTTTGAAGCTGTCAAGGAGGTCCTTAAAGAAGTTTTAAAGATG
TTGCTTGGGCAAATTAAATGTGTGCAAAAGTTTTTGTTAGCACGTAAAGGGGAAGCAGCGCTGATTGCAATTGCTATACC
TGTAGTAGGAAAAATTATTGCTCCAGTAATTTTGGGATCAACATTGCTGATATATGCTTTAGATAAGGTCATAAAAAAGC
AATCGCCAGAAAAAAGCGCTGTAGCAAATATCAAGCAAGATATTAAGAAATTTTCTCCTGATTCAGATAAAATGGGAAAA
TACCCTAAACTATCTGATTTAGCACAAAAATATACTGAAATGGATGTTACAGCATTAAGTAGTGATATTTTGCCTGGTTT
AGCGGAAAATTGTGCTAAATTTGCAAATGAAAGCTTAATAAAATTGAATGGATTAGAAGAAAAAATTAGCAGCTTAAATA
AGCTATCGCTAAATAGTACAGAAGATTTTACAGTAGCTAAGAATACTCTTGAAAACATTCTTGCGAAATTAACAACGGAA
GTTAGTATGCTATCTGAACATGTAAGTGGCCTTGGTAATACATGTAATTTGGTTGAATCATCTATGAAAGGTGAGATGGA
AGCAAAACACATTCCTCAAAAGCTAACTTCTGCGTTAGCATTAGATAACGCTCAAGCAGCAGCAGAATCAACATCAAATA
GCCGCTCAAATAGAACTGCTGCTAATATTAATATTAGTAGTAAAAATTCTAAAAGCCGCTTTCATGATTTTCAGTAA

Upstream 100 bases:

>100_bases
AGAAAAAATAAGAAATGATGATCAATATTTAGATTGATCTGCTAATTATTTTTACATAGTTATTCAATATCTAACATAAA
AATTTAAGGAACTATTTTTT

Downstream 100 bases:

>100_bases
CAGAGTAAATTATATTGTTTGTGTAAATTGCAAAATAATAACTTGATAGTAGCAAGAATATTGCAATGCATTATTCAATT
CTTCAACTTTCCTAAATGTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 318; Mature: 318

Protein sequence:

>318_residues
MITLTSTLQSTVYFLEWTTDTVLSEIKDYAQGVKDDTSEFYCSFSKETKEGCEKIKNVIYGDEFHGFEAVKEVLKEVLKM
LLGQIKCVQKFLLARKGEAALIAIAIPVVGKIIAPVILGSTLLIYALDKVIKKQSPEKSAVANIKQDIKKFSPDSDKMGK
YPKLSDLAQKYTEMDVTALSSDILPGLAENCAKFANESLIKLNGLEEKISSLNKLSLNSTEDFTVAKNTLENILAKLTTE
VSMLSEHVSGLGNTCNLVESSMKGEMEAKHIPQKLTSALALDNAQAAAESTSNSRSNRTAANINISSKNSKSRFHDFQ

Sequences:

>Translated_318_residues
MITLTSTLQSTVYFLEWTTDTVLSEIKDYAQGVKDDTSEFYCSFSKETKEGCEKIKNVIYGDEFHGFEAVKEVLKEVLKM
LLGQIKCVQKFLLARKGEAALIAIAIPVVGKIIAPVILGSTLLIYALDKVIKKQSPEKSAVANIKQDIKKFSPDSDKMGK
YPKLSDLAQKYTEMDVTALSSDILPGLAENCAKFANESLIKLNGLEEKISSLNKLSLNSTEDFTVAKNTLENILAKLTTE
VSMLSEHVSGLGNTCNLVESSMKGEMEAKHIPQKLTSALALDNAQAAAESTSNSRSNRTAANINISSKNSKSRFHDFQ
>Mature_318_residues
MITLTSTLQSTVYFLEWTTDTVLSEIKDYAQGVKDDTSEFYCSFSKETKEGCEKIKNVIYGDEFHGFEAVKEVLKEVLKM
LLGQIKCVQKFLLARKGEAALIAIAIPVVGKIIAPVILGSTLLIYALDKVIKKQSPEKSAVANIKQDIKKFSPDSDKMGK
YPKLSDLAQKYTEMDVTALSSDILPGLAENCAKFANESLIKLNGLEEKISSLNKLSLNSTEDFTVAKNTLENILAKLTTE
VSMLSEHVSGLGNTCNLVESSMKGEMEAKHIPQKLTSALALDNAQAAAESTSNSRSNRTAANINISSKNSKSRFHDFQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 34863; Mature: 34863

Theoretical pI: Translated: 6.92; Mature: 6.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MITLTSTLQSTVYFLEWTTDTVLSEIKDYAQGVKDDTSEFYCSFSKETKEGCEKIKNVIY
CEEEHHHHHHHHHHEECCHHHHHHHHHHHHCCCCCCCHHHHHHCCHHHHHHHHHHHHHHC
GDEFHGFEAVKEVLKEVLKMLLGQIKCVQKFLLARKGEAALIAIAIPVVGKIIAPVILGS
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHH
TLLIYALDKVIKKQSPEKSAVANIKQDIKKFSPDSDKMGKYPKLSDLAQKYTEMDVTALS
HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCHHCCCCCCHHHHHHHHHHHHHHHHH
SDILPGLAENCAKFANESLIKLNGLEEKISSLNKLSLNSTEDFTVAKNTLENILAKLTTE
HHHHHHHHHHHHHHHCCCCEEECCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHH
VSMLSEHVSGLGNTCNLVESSMKGEMEAKHIPQKLTSALALDNAQAAAESTSNSRSNRTA
HHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCCE
ANINISSKNSKSRFHDFQ
EEEEECCCCCCCCCCCCC
>Mature Secondary Structure
MITLTSTLQSTVYFLEWTTDTVLSEIKDYAQGVKDDTSEFYCSFSKETKEGCEKIKNVIY
CEEEHHHHHHHHHHEECCHHHHHHHHHHHHCCCCCCCHHHHHHCCHHHHHHHHHHHHHHC
GDEFHGFEAVKEVLKEVLKMLLGQIKCVQKFLLARKGEAALIAIAIPVVGKIIAPVILGS
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHH
TLLIYALDKVIKKQSPEKSAVANIKQDIKKFSPDSDKMGKYPKLSDLAQKYTEMDVTALS
HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCHHCCCCCCHHHHHHHHHHHHHHHHH
SDILPGLAENCAKFANESLIKLNGLEEKISSLNKLSLNSTEDFTVAKNTLENILAKLTTE
HHHHHHHHHHHHHHHCCCCEEECCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHH
VSMLSEHVSGLGNTCNLVESSMKGEMEAKHIPQKLTSALALDNAQAAAESTSNSRSNRTA
HHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCCE
ANINISSKNSKSRFHDFQ
EEEEECCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA