| Definition | Orientia tsutsugamushi str. Ikeda, complete genome. |
|---|---|
| Accession | NC_010793 |
| Length | 2,008,987 |
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The map label for this gene is 189183811
Identifier: 189183811
GI number: 189183811
Start: 944140
End: 945096
Strand: Reverse
Name: 189183811
Synonym: OTT_0904
Alternate gene names: NA
Gene position: 945096-944140 (Counterclockwise)
Preceding gene: 189183812
Following gene: 189183810
Centisome position: 47.04
GC content: 33.12
Gene sequence:
>957_bases ATGATTACTTTAACCAGTACGCTGCAAAGCACTGTATATTTTTTAGAATGGACAACAGATACAGTATTATCAGAGATTAA AGATTATGCCCAAGGTGTTAAGGATGATACATCAGAGTTTTATTGTAGCTTTTCTAAAGAAACAAAAGAAGGTTGCGAAA AAATAAAAAATGTTATTTACGGAGATGAGTTTCATGGTTTTGAAGCTGTCAAGGAGGTCCTTAAAGAAGTTTTAAAGATG TTGCTTGGGCAAATTAAATGTGTGCAAAAGTTTTTGTTAGCACGTAAAGGGGAAGCAGCGCTGATTGCAATTGCTATACC TGTAGTAGGAAAAATTATTGCTCCAGTAATTTTGGGATCAACATTGCTGATATATGCTTTAGATAAGGTCATAAAAAAGC AATCGCCAGAAAAAAGCGCTGTAGCAAATATCAAGCAAGATATTAAGAAATTTTCTCCTGATTCAGATAAAATGGGAAAA TACCCTAAACTATCTGATTTAGCACAAAAATATACTGAAATGGATGTTACAGCATTAAGTAGTGATATTTTGCCTGGTTT AGCGGAAAATTGTGCTAAATTTGCAAATGAAAGCTTAATAAAATTGAATGGATTAGAAGAAAAAATTAGCAGCTTAAATA AGCTATCGCTAAATAGTACAGAAGATTTTACAGTAGCTAAGAATACTCTTGAAAACATTCTTGCGAAATTAACAACGGAA GTTAGTATGCTATCTGAACATGTAAGTGGCCTTGGTAATACATGTAATTTGGTTGAATCATCTATGAAAGGTGAGATGGA AGCAAAACACATTCCTCAAAAGCTAACTTCTGCGTTAGCATTAGATAACGCTCAAGCAGCAGCAGAATCAACATCAAATA GCCGCTCAAATAGAACTGCTGCTAATATTAATATTAGTAGTAAAAATTCTAAAAGCCGCTTTCATGATTTTCAGTAA
Upstream 100 bases:
>100_bases AGAAAAAATAAGAAATGATGATCAATATTTAGATTGATCTGCTAATTATTTTTACATAGTTATTCAATATCTAACATAAA AATTTAAGGAACTATTTTTT
Downstream 100 bases:
>100_bases CAGAGTAAATTATATTGTTTGTGTAAATTGCAAAATAATAACTTGATAGTAGCAAGAATATTGCAATGCATTATTCAATT CTTCAACTTTCCTAAATGTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 318; Mature: 318
Protein sequence:
>318_residues MITLTSTLQSTVYFLEWTTDTVLSEIKDYAQGVKDDTSEFYCSFSKETKEGCEKIKNVIYGDEFHGFEAVKEVLKEVLKM LLGQIKCVQKFLLARKGEAALIAIAIPVVGKIIAPVILGSTLLIYALDKVIKKQSPEKSAVANIKQDIKKFSPDSDKMGK YPKLSDLAQKYTEMDVTALSSDILPGLAENCAKFANESLIKLNGLEEKISSLNKLSLNSTEDFTVAKNTLENILAKLTTE VSMLSEHVSGLGNTCNLVESSMKGEMEAKHIPQKLTSALALDNAQAAAESTSNSRSNRTAANINISSKNSKSRFHDFQ
Sequences:
>Translated_318_residues MITLTSTLQSTVYFLEWTTDTVLSEIKDYAQGVKDDTSEFYCSFSKETKEGCEKIKNVIYGDEFHGFEAVKEVLKEVLKM LLGQIKCVQKFLLARKGEAALIAIAIPVVGKIIAPVILGSTLLIYALDKVIKKQSPEKSAVANIKQDIKKFSPDSDKMGK YPKLSDLAQKYTEMDVTALSSDILPGLAENCAKFANESLIKLNGLEEKISSLNKLSLNSTEDFTVAKNTLENILAKLTTE VSMLSEHVSGLGNTCNLVESSMKGEMEAKHIPQKLTSALALDNAQAAAESTSNSRSNRTAANINISSKNSKSRFHDFQ >Mature_318_residues MITLTSTLQSTVYFLEWTTDTVLSEIKDYAQGVKDDTSEFYCSFSKETKEGCEKIKNVIYGDEFHGFEAVKEVLKEVLKM LLGQIKCVQKFLLARKGEAALIAIAIPVVGKIIAPVILGSTLLIYALDKVIKKQSPEKSAVANIKQDIKKFSPDSDKMGK YPKLSDLAQKYTEMDVTALSSDILPGLAENCAKFANESLIKLNGLEEKISSLNKLSLNSTEDFTVAKNTLENILAKLTTE VSMLSEHVSGLGNTCNLVESSMKGEMEAKHIPQKLTSALALDNAQAAAESTSNSRSNRTAANINISSKNSKSRFHDFQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34863; Mature: 34863
Theoretical pI: Translated: 6.92; Mature: 6.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MITLTSTLQSTVYFLEWTTDTVLSEIKDYAQGVKDDTSEFYCSFSKETKEGCEKIKNVIY CEEEHHHHHHHHHHEECCHHHHHHHHHHHHCCCCCCCHHHHHHCCHHHHHHHHHHHHHHC GDEFHGFEAVKEVLKEVLKMLLGQIKCVQKFLLARKGEAALIAIAIPVVGKIIAPVILGS CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHH TLLIYALDKVIKKQSPEKSAVANIKQDIKKFSPDSDKMGKYPKLSDLAQKYTEMDVTALS HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCHHCCCCCCHHHHHHHHHHHHHHHHH SDILPGLAENCAKFANESLIKLNGLEEKISSLNKLSLNSTEDFTVAKNTLENILAKLTTE HHHHHHHHHHHHHHHCCCCEEECCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHH VSMLSEHVSGLGNTCNLVESSMKGEMEAKHIPQKLTSALALDNAQAAAESTSNSRSNRTA HHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCCE ANINISSKNSKSRFHDFQ EEEEECCCCCCCCCCCCC >Mature Secondary Structure MITLTSTLQSTVYFLEWTTDTVLSEIKDYAQGVKDDTSEFYCSFSKETKEGCEKIKNVIY CEEEHHHHHHHHHHEECCHHHHHHHHHHHHCCCCCCCHHHHHHCCHHHHHHHHHHHHHHC GDEFHGFEAVKEVLKEVLKMLLGQIKCVQKFLLARKGEAALIAIAIPVVGKIIAPVILGS CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHH TLLIYALDKVIKKQSPEKSAVANIKQDIKKFSPDSDKMGKYPKLSDLAQKYTEMDVTALS HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCHHCCCCCCHHHHHHHHHHHHHHHHH SDILPGLAENCAKFANESLIKLNGLEEKISSLNKLSLNSTEDFTVAKNTLENILAKLTTE HHHHHHHHHHHHHHHCCCCEEECCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHH VSMLSEHVSGLGNTCNLVESSMKGEMEAKHIPQKLTSALALDNAQAAAESTSNSRSNRTA HHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCCE ANINISSKNSKSRFHDFQ EEEEECCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA