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The map label for this gene is spoT [H]

Identifier: 189183789

GI number: 189183789

Start: 925148

End: 925540

Strand: Reverse

Name: spoT [H]

Synonym: OTT_0882

Alternate gene names: 189183789

Gene position: 925540-925148 (Counterclockwise)

Preceding gene: 189183790

Following gene: 189183788

Centisome position: 46.07

GC content: 32.06

Gene sequence:

>393_bases
ATGTTGGCATTTTTAAATTGTGAACATATCAATAAACTACTTGATAAGCTGGACTTGATTAATCATAGTTTTGATAAACG
CATTAATCTTGATAAAGTTGAAAAAGCTATATTTTATGTAAAAAAATATCATGGCAATCAAAAGCGAGATACAGGAGAAC
CTTATTATATGCATCCATTAGAAGTAGCGCTCATGGTTGCAGACTACAGCTTTAAAACGGATACGATTATTACAGCAATA
CTACATGATACCATCGAAGACACAACGCTAACTAAAGAAAAGATAGCAATCGAATTTAATGATAACATTGCCGAGCAAGT
TCTAGCTCTTACAAGAAACAGAGGTGGTAAGAAAACCAGTTCCATGAAAATGATTCAAACATTAGTGAATTAA

Upstream 100 bases:

>100_bases
AAAGTAACCAAGATCAGTATACAGCTTTCACATGTAGTATACCTATCGAAGTTCGTTGAGAAACTGAAAATTAGAATTAT
TAATAGAGATAGAGGAAATA

Downstream 100 bases:

>100_bases
GATAAAGTAGAGCTATTACTAATCAAACTATTGGACAGATTGGATAATATTAAAACTATATTCATAAAGCCAGCCAAAAG
AAGACAAGAAATCATACTAG

Product: RelA/SpoT-related protein

Products: NA

Alternate protein names: Penta-phosphate guanosine-3'-pyrophosphohydrolase; (ppGpp)ase [H]

Number of amino acids: Translated: 130; Mature: 130

Protein sequence:

>130_residues
MLAFLNCEHINKLLDKLDLINHSFDKRINLDKVEKAIFYVKKYHGNQKRDTGEPYYMHPLEVALMVADYSFKTDTIITAI
LHDTIEDTTLTKEKIAIEFNDNIAEQVLALTRNRGGKKTSSMKMIQTLVN

Sequences:

>Translated_130_residues
MLAFLNCEHINKLLDKLDLINHSFDKRINLDKVEKAIFYVKKYHGNQKRDTGEPYYMHPLEVALMVADYSFKTDTIITAI
LHDTIEDTTLTKEKIAIEFNDNIAEQVLALTRNRGGKKTSSMKMIQTLVN
>Mature_130_residues
MLAFLNCEHINKLLDKLDLINHSFDKRINLDKVEKAIFYVKKYHGNQKRDTGEPYYMHPLEVALMVADYSFKTDTIITAI
LHDTIEDTTLTKEKIAIEFNDNIAEQVLALTRNRGGKKTSSMKMIQTLVN

Specific function: In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance. This enzyme catalyzes the degradation of ppGpp into G

COG id: COG0317

COG function: function code TK; Guanosine polyphosphate pyrophosphohydrolases/synthetases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HD domain [H]

Homologues:

Organism=Escherichia coli, GI1790082, Length=100, Percent_Identity=29, Blast_Score=62, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002912
- InterPro:   IPR012675
- InterPro:   IPR003607
- InterPro:   IPR007685
- InterPro:   IPR004811
- InterPro:   IPR004095
- InterPro:   IPR012676 [H]

Pfam domain/function: PF01842 ACT; PF04607 RelA_SpoT; PF02824 TGS [H]

EC number: =3.1.7.2 [H]

Molecular weight: Translated: 15018; Mature: 15018

Theoretical pI: Translated: 7.71; Mature: 7.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLAFLNCEHINKLLDKLDLINHSFDKRINLDKVEKAIFYVKKYHGNQKRDTGEPYYMHPL
CEEEECHHHHHHHHHHHHHHHCCHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCEEECHH
EVALMVADYSFKTDTIITAILHDTIEDTTLTKEKIAIEFNDNIAEQVLALTRNRGGKKTS
HHHHHHHCCCCCHHHHHHHHHHHHHCCCEECCEEEEEEECCCHHHHHHHHHHCCCCCCHH
SMKMIQTLVN
HHHHHHHHHC
>Mature Secondary Structure
MLAFLNCEHINKLLDKLDLINHSFDKRINLDKVEKAIFYVKKYHGNQKRDTGEPYYMHPL
CEEEECHHHHHHHHHHHHHHHCCHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCEEECHH
EVALMVADYSFKTDTIITAILHDTIEDTTLTKEKIAIEFNDNIAEQVLALTRNRGGKKTS
HHHHHHHCCCCCHHHHHHHHHHHHHCCCEECCEEEEEEECCCHHHHHHHHHHCCCCCCHH
SMKMIQTLVN
HHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9537320 [H]