| Definition | Orientia tsutsugamushi str. Ikeda, complete genome. |
|---|---|
| Accession | NC_010793 |
| Length | 2,008,987 |
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The map label for this gene is 189183788
Identifier: 189183788
GI number: 189183788
Start: 924953
End: 925108
Strand: Reverse
Name: 189183788
Synonym: OTT_0881
Alternate gene names: NA
Gene position: 925108-924953 (Counterclockwise)
Preceding gene: 189183789
Following gene: 189183787
Centisome position: 46.05
GC content: 30.77
Gene sequence:
>156_bases TTGGATAATATTAAAACTATATTCATAAAGCCAGCCAAAAGAAGACAAGAAATCATACTAGAAACGCAGCAAGAATTTAT ACCTCTTGCTGAATACCTTAAATTACCGAAAATTGCTATAGAGCTAAATAAATACTGTGAGCTTTATGCTACCTAA
Upstream 100 bases:
>100_bases AAGAAACAGAGGTGGTAAGAAAACCAGTTCCATGAAAATGATTCAAACATTAGTGAATTAAGATAAAGTAGAGCTATTAC TAATCAAACTATTGGACAGA
Downstream 100 bases:
>100_bases TAAACTAAAGTTTAATAGGTGGTTAATGTAGTGAATTGCAGAAATTAAAATTCAATAAGATAATGTTCATGTAAGTTATT TTACTGTATAATTTAAAAAG
Product: RelA/SpoT-related protein
Products: NA
Alternate protein names: SpoT-Like PpGpp Hydrolase
Number of amino acids: Translated: 51; Mature: 51
Protein sequence:
>51_residues MDNIKTIFIKPAKRRQEIILETQQEFIPLAEYLKLPKIAIELNKYCELYAT
Sequences:
>Translated_51_residues MDNIKTIFIKPAKRRQEIILETQQEFIPLAEYLKLPKIAIELNKYCELYAT >Mature_51_residues MDNIKTIFIKPAKRRQEIILETQQEFIPLAEYLKLPKIAIELNKYCELYAT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 6083; Mature: 6083
Theoretical pI: Translated: 8.47; Mature: 8.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDNIKTIFIKPAKRRQEIILETQQEFIPLAEYLKLPKIAIELNKYCELYAT CCCCEEEEECCCCHHHHHHHHHHHHHCCHHHHHCCCHHEEECCCCEEEECC >Mature Secondary Structure MDNIKTIFIKPAKRRQEIILETQQEFIPLAEYLKLPKIAIELNKYCELYAT CCCCEEEEECCCCHHHHHHHHHHHHHCCHHHHHCCCHHEEECCCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA