Definition Orientia tsutsugamushi str. Ikeda, complete genome.
Accession NC_010793
Length 2,008,987

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The map label for this gene is traG [H]

Identifier: 189183762

GI number: 189183762

Start: 902734

End: 904668

Strand: Reverse

Name: traG [H]

Synonym: OTT_0855

Alternate gene names: 189183762

Gene position: 904668-902734 (Counterclockwise)

Preceding gene: 189183763

Following gene: 189183760

Centisome position: 45.03

GC content: 34.88

Gene sequence:

>1935_bases
ATGTTTGCTTCTCTTTCCTCGCAAACGAGTTATTTTGTATCTAAAATGTTGGAAAATCATCTTTTACCGGCTTATGAAGG
ACTATCGAGCAGAAAAACTGGTATTATGTTTGGAGCTAAGGCTGTAGCTAAGATTCGAGATGTGCAAATACATGATCCAG
TAACTTTAACTAATACTAAGGAATTTCTTAGACAATGCTTTATGAAGCCTTACATCATAGGTAATATCTTAGGTAAAAAA
GCAGCTGCTCAACAAACTAATGATATCATAGGATTTATCGAGCAGAATATACCTAATAATTTCGGTATTTATTATCGCGA
ACCTAGTAATTTAGGTATTAGTTTCAAGACATGCAGACAAGCTACTCCATTAATTAAGGCAGCAATTCATAAAGAATTAA
ACGAAGGACTTCTAACCAAGTTTGCAGCTGCGATTGGAGTTCAATCTGATCAGTCACACATGTTAAGTCAAAGACTAAAA
GTCATGACTGGAGATACACTAAAATATCTACAAAGAGAACAACAAGACATTCATGAATGGATGAAGCAAGCTATGCTACT
TAATGCTAATCGTGAGTCATATGATGACTGGCGTGAGAAGTTTTCATTATCACGAATTTATCCTAATCTGGTGAGTATGC
ATGCAATCAGAGGGCTCTTTCAAAAATCATTTTCGTATCTAGTCGCTGGGGAAATGGCTGCTCACATGATGCCTATTTTA
CAATCTGTTTTTTTTGCATTAGTAGTCTCAATGATCTTTATTGTATTTCCAATGGGCCTATTACCTGGCGGCTATAACAT
ACTCAAAACATGGATTTTGTTAATAATATGGGTCAGCAGCTGGCCAGTATTTTTTACAATAATCCATTGTCTAGGAATGA
TCAGCTTATCCAGTAAATCTGGAGCTTTCGGTAGTGATTATGGTCTGAATATGCTATCGCAAGGAAGCTTTGCAGAGATG
ATTTTATATAGCTATGCGACATTTCAAATGCTTGCATCATCAATACCAATGCTTTCTTGGTCAGTGATAAAAGCTTGTGC
TCATGCTACAGCTAACTTAGCCAGCCAGTTCTCTCCTATACAAGTTGCTAGCAGCTTAGGAAGTAATATAGTCGACAATA
ACTTGAGTATGGATAATTACAGCATAGGCAATAGAACTATTTCTCAACAAAACCTAGCTCCTTCATTAGATATGACTGAT
AGTATTATCAATTATGGTAGCTACAAAATTATTACTGGAAATAATGGCGAGCAATTTGTAATTCAAACTGTAGATTCATT
GGGAAATAACTTCCGCTCTTCTGCACTGATACAAACTGGATATCAAAACCAGTTTTTGAGTTCTCAGAGCACGCTTAATT
CACTGACACAAAAAGAGGCCAATCTTATTTCAACAGGAAACTCCATGGCCATAGACATAGGCAGAAGGTTAACTCATGAT
GAAGCTCTGTCTATAGGCCTAACTGAGAGTGAATATCAAGCTCTGCAAATCGTTAGTTCTGATAGTGGATCCTTTAGTCA
GCATACAGGTAGTAGCGATAGAAAGACAAGTGGTACTAATGTAGAAGTAGGAGCTGGGAGATTTTTTGTCAAAAGTGTAG
TTTTAGGATGGCAAATACATAATGCAGAAGCTTATATTAATAAAGGTTTAACTTTAGCATTTTTAGGACAATTGCAGAAT
GCAATAGAACATTTTGATTTAGCTATTAAATATGATCCTAAAGATTTAAAAGCATACAGTAATAAAGGCTATGTATTAAG
TTTACTAAAAAAATATCATGAAGCAGTGGAAAGCTGTAACTTAGCTATTAAATATGATCCAAATTGCTCAGATGCTTATT
ATATCAAAGGAATGATTTTTGAGAAATTAGGAAAACATCAAGATCTGATTAAAAATTATGATATGGCTACTATAGTCATT
TACAATGAAGTTTGA

Upstream 100 bases:

>100_bases
TTAATCAATCAGAAATAATAATTTTATAAAAACTTACATCTTTTTTATAAAATTATTATTTCTTTTCTTGATTCTTATCA
CGGTATCTATAGGTATTGCA

Downstream 100 bases:

>100_bases
GCATAGAAAAAAGAGATAATAGAATCATAAGATTTAGCAAATTGAGTAATTTGATGTCTAATCCACCGCTTCATATTAGC
CGAAAACTTTTCTATCGGAT

Product: putative conjugative transfer protein TraG

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 644; Mature: 644

Protein sequence:

>644_residues
MFASLSSQTSYFVSKMLENHLLPAYEGLSSRKTGIMFGAKAVAKIRDVQIHDPVTLTNTKEFLRQCFMKPYIIGNILGKK
AAAQQTNDIIGFIEQNIPNNFGIYYREPSNLGISFKTCRQATPLIKAAIHKELNEGLLTKFAAAIGVQSDQSHMLSQRLK
VMTGDTLKYLQREQQDIHEWMKQAMLLNANRESYDDWREKFSLSRIYPNLVSMHAIRGLFQKSFSYLVAGEMAAHMMPIL
QSVFFALVVSMIFIVFPMGLLPGGYNILKTWILLIIWVSSWPVFFTIIHCLGMISLSSKSGAFGSDYGLNMLSQGSFAEM
ILYSYATFQMLASSIPMLSWSVIKACAHATANLASQFSPIQVASSLGSNIVDNNLSMDNYSIGNRTISQQNLAPSLDMTD
SIINYGSYKIITGNNGEQFVIQTVDSLGNNFRSSALIQTGYQNQFLSSQSTLNSLTQKEANLISTGNSMAIDIGRRLTHD
EALSIGLTESEYQALQIVSSDSGSFSQHTGSSDRKTSGTNVEVGAGRFFVKSVVLGWQIHNAEAYINKGLTLAFLGQLQN
AIEHFDLAIKYDPKDLKAYSNKGYVLSLLKKYHEAVESCNLAIKYDPNCSDAYYIKGMIFEKLGKHQDLIKNYDMATIVI
YNEV

Sequences:

>Translated_644_residues
MFASLSSQTSYFVSKMLENHLLPAYEGLSSRKTGIMFGAKAVAKIRDVQIHDPVTLTNTKEFLRQCFMKPYIIGNILGKK
AAAQQTNDIIGFIEQNIPNNFGIYYREPSNLGISFKTCRQATPLIKAAIHKELNEGLLTKFAAAIGVQSDQSHMLSQRLK
VMTGDTLKYLQREQQDIHEWMKQAMLLNANRESYDDWREKFSLSRIYPNLVSMHAIRGLFQKSFSYLVAGEMAAHMMPIL
QSVFFALVVSMIFIVFPMGLLPGGYNILKTWILLIIWVSSWPVFFTIIHCLGMISLSSKSGAFGSDYGLNMLSQGSFAEM
ILYSYATFQMLASSIPMLSWSVIKACAHATANLASQFSPIQVASSLGSNIVDNNLSMDNYSIGNRTISQQNLAPSLDMTD
SIINYGSYKIITGNNGEQFVIQTVDSLGNNFRSSALIQTGYQNQFLSSQSTLNSLTQKEANLISTGNSMAIDIGRRLTHD
EALSIGLTESEYQALQIVSSDSGSFSQHTGSSDRKTSGTNVEVGAGRFFVKSVVLGWQIHNAEAYINKGLTLAFLGQLQN
AIEHFDLAIKYDPKDLKAYSNKGYVLSLLKKYHEAVESCNLAIKYDPNCSDAYYIKGMIFEKLGKHQDLIKNYDMATIVI
YNEV
>Mature_644_residues
MFASLSSQTSYFVSKMLENHLLPAYEGLSSRKTGIMFGAKAVAKIRDVQIHDPVTLTNTKEFLRQCFMKPYIIGNILGKK
AAAQQTNDIIGFIEQNIPNNFGIYYREPSNLGISFKTCRQATPLIKAAIHKELNEGLLTKFAAAIGVQSDQSHMLSQRLK
VMTGDTLKYLQREQQDIHEWMKQAMLLNANRESYDDWREKFSLSRIYPNLVSMHAIRGLFQKSFSYLVAGEMAAHMMPIL
QSVFFALVVSMIFIVFPMGLLPGGYNILKTWILLIIWVSSWPVFFTIIHCLGMISLSSKSGAFGSDYGLNMLSQGSFAEM
ILYSYATFQMLASSIPMLSWSVIKACAHATANLASQFSPIQVASSLGSNIVDNNLSMDNYSIGNRTISQQNLAPSLDMTD
SIINYGSYKIITGNNGEQFVIQTVDSLGNNFRSSALIQTGYQNQFLSSQSTLNSLTQKEANLISTGNSMAIDIGRRLTHD
EALSIGLTESEYQALQIVSSDSGSFSQHTGSSDRKTSGTNVEVGAGRFFVKSVVLGWQIHNAEAYINKGLTLAFLGQLQN
AIEHFDLAIKYDPKDLKAYSNKGYVLSLLKKYHEAVESCNLAIKYDPNCSDAYYIKGMIFEKLGKHQDLIKNYDMATIVI
YNEV

Specific function: Plays a crucial role in donor-recipient cell interactions. Required for two stages of the conjugation process:pilus biosynthesis and mating aggregate stabilization. May interact with traN [H]

COG id: COG0457

COG function: function code R; FOG: TPR repeat

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012931 [H]

Pfam domain/function: PF07916 TraG_N [H]

EC number: NA

Molecular weight: Translated: 71686; Mature: 71686

Theoretical pI: Translated: 8.31; Mature: 8.31

Prosite motif: PS50005 TPR ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFASLSSQTSYFVSKMLENHLLPAYEGLSSRKTGIMFGAKAVAKIRDVQIHDPVTLTNTK
CCCCCCCHHHHHHHHHHHHCCCCHHCCCCCCCCCEEECHHHHHHHHCEEECCCEEECCHH
EFLRQCFMKPYIIGNILGKKAAAQQTNDIIGFIEQNIPNNFGIYYREPSNLGISFKTCRQ
HHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCHHHHHH
ATPLIKAAIHKELNEGLLTKFAAAIGVQSDQSHMLSQRLKVMTGDTLKYLQREQQDIHEW
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
MKQAMLLNANRESYDDWREKFSLSRIYPNLVSMHAIRGLFQKSFSYLVAGEMAAHMMPIL
HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QSVFFALVVSMIFIVFPMGLLPGGYNILKTWILLIIWVSSWPVFFTIIHCLGMISLSSKS
HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHEECCCC
GAFGSDYGLNMLSQGSFAEMILYSYATFQMLASSIPMLSWSVIKACAHATANLASQFSPI
CCCCCCCCCCHHCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCHH
QVASSLGSNIVDNNLSMDNYSIGNRTISQQNLAPSLDMTDSIINYGSYKIITGNNGEQFV
HHHHHHCCHHHCCCCCCCCCCCCCCEECCCCCCCCCCCHHHHHCCCCEEEEECCCCCEEH
IQTVDSLGNNFRSSALIQTGYQNQFLSSQSTLNSLTQKEANLISTGNSMAIDIGRRLTHD
HEEHHHHCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCC
EALSIGLTESEYQALQIVSSDSGSFSQHTGSSDRKTSGTNVEVGAGRFFVKSVVLGWQIH
HHHEECCCHHHHHHEEEEECCCCCCCCCCCCCCCCCCCCCEEECCCHHHHHHHHHHEEEE
NAEAYINKGLTLAFLGQLQNAIEHFDLAIKYDPKDLKAYSNKGYVLSLLKKYHEAVESCN
CCHHHHHCCCHHHHHHHHHHHHHHCCEEEEECCHHHHHHCCCCHHHHHHHHHHHHHHHCC
LAIKYDPNCSDAYYIKGMIFEKLGKHQDLIKNYDMATIVIYNEV
EEEEECCCCCCCHHHHHHHHHHHCCHHHHHHCCCEEEEEEEECC
>Mature Secondary Structure
MFASLSSQTSYFVSKMLENHLLPAYEGLSSRKTGIMFGAKAVAKIRDVQIHDPVTLTNTK
CCCCCCCHHHHHHHHHHHHCCCCHHCCCCCCCCCEEECHHHHHHHHCEEECCCEEECCHH
EFLRQCFMKPYIIGNILGKKAAAQQTNDIIGFIEQNIPNNFGIYYREPSNLGISFKTCRQ
HHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCHHHHHH
ATPLIKAAIHKELNEGLLTKFAAAIGVQSDQSHMLSQRLKVMTGDTLKYLQREQQDIHEW
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
MKQAMLLNANRESYDDWREKFSLSRIYPNLVSMHAIRGLFQKSFSYLVAGEMAAHMMPIL
HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QSVFFALVVSMIFIVFPMGLLPGGYNILKTWILLIIWVSSWPVFFTIIHCLGMISLSSKS
HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHEECCCC
GAFGSDYGLNMLSQGSFAEMILYSYATFQMLASSIPMLSWSVIKACAHATANLASQFSPI
CCCCCCCCCCHHCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCHH
QVASSLGSNIVDNNLSMDNYSIGNRTISQQNLAPSLDMTDSIINYGSYKIITGNNGEQFV
HHHHHHCCHHHCCCCCCCCCCCCCCEECCCCCCCCCCCHHHHHCCCCEEEEECCCCCEEH
IQTVDSLGNNFRSSALIQTGYQNQFLSSQSTLNSLTQKEANLISTGNSMAIDIGRRLTHD
HEEHHHHCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCC
EALSIGLTESEYQALQIVSSDSGSFSQHTGSSDRKTSGTNVEVGAGRFFVKSVVLGWQIH
HHHEECCCHHHHHHEEEEECCCCCCCCCCCCCCCCCCCCCEEECCCHHHHHHHHHHEEEE
NAEAYINKGLTLAFLGQLQNAIEHFDLAIKYDPKDLKAYSNKGYVLSLLKKYHEAVESCN
CCHHHHHCCCHHHHHHHHHHHHHHCCEEEEECCHHHHHHCCCCHHHHHHHHHHHHHHHCC
LAIKYDPNCSDAYYIKGMIFEKLGKHQDLIKNYDMATIVIYNEV
EEEEECCCCCCCHHHHHHHHHHHCCHHHHHHCCCEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 1348105; 7915817 [H]