| Definition | Orientia tsutsugamushi str. Ikeda, complete genome. |
|---|---|
| Accession | NC_010793 |
| Length | 2,008,987 |
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The map label for this gene is 189183760
Identifier: 189183760
GI number: 189183760
Start: 901633
End: 901851
Strand: Reverse
Name: 189183760
Synonym: OTT_0853
Alternate gene names: NA
Gene position: 901851-901633 (Counterclockwise)
Preceding gene: 189183762
Following gene: 189183759
Centisome position: 44.89
GC content: 27.4
Gene sequence:
>219_bases ATGACTATAAAAACTCAAATAGTGGTAGACAATAAAATGCACCAAGTAATATGTACAGATTTTTCTAACGGTAAAAAACA TGACTTTAGATTATTTAAGGAATCCAAAATTCTTGTTCATCCTAAGGTTAAAGCGATTACTGATACAGGATATCAAGGTA TACAAAAAATTCACAATAATTCTGAATTACCAAAGAAAAAAGCAAGAAAAATCCTTTAA
Upstream 100 bases:
>100_bases TTTTCCTTGATTAACACATTTTATTACTTCCTCCCTAAAGTCTTGGCTATATGATTTTGGCATTTTCTTTTCAGAATACT ATGCTCAAACTTCATTGTAA
Downstream 100 bases:
>100_bases CTAAAAATGATAAAAAGAATAATCGTAGATTAGCAGGAGAAAGAGTTGTCAATGAAAACGTTATTGCTATGCTAAAACGG TTCAAAATTATTGCTGATAA
Product: transposase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 72; Mature: 71
Protein sequence:
>72_residues MTIKTQIVVDNKMHQVICTDFSNGKKHDFRLFKESKILVHPKVKAITDTGYQGIQKIHNNSELPKKKARKIL
Sequences:
>Translated_72_residues MTIKTQIVVDNKMHQVICTDFSNGKKHDFRLFKESKILVHPKVKAITDTGYQGIQKIHNNSELPKKKARKIL >Mature_71_residues TIKTQIVVDNKMHQVICTDFSNGKKHDFRLFKESKILVHPKVKAITDTGYQGIQKIHNNSELPKKKARKIL
Specific function: Involved in the transposition of the insertion sequence [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the transposase 11 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002559 [H]
Pfam domain/function: PF01609 Transposase_11 [H]
EC number: NA
Molecular weight: Translated: 8331; Mature: 8200
Theoretical pI: Translated: 10.75; Mature: 10.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTIKTQIVVDNKMHQVICTDFSNGKKHDFRLFKESKILVHPKVKAITDTGYQGIQKIHNN CCEEEEEEECCCCEEEEEECCCCCCCCCEEEECCCEEEECCCCEEECCCCHHHHHHHHCC SELPKKKARKIL CCCCHHHHCCCC >Mature Secondary Structure TIKTQIVVDNKMHQVICTDFSNGKKHDFRLFKESKILVHPKVKAITDTGYQGIQKIHNN CEEEEEEECCCCEEEEEECCCCCCCCCEEEECCCEEEECCCCEEECCCCHHHHHHHHCC SELPKKKARKIL CCCCHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1662761 [H]