| Definition | Orientia tsutsugamushi str. Ikeda, complete genome. |
|---|---|
| Accession | NC_010793 |
| Length | 2,008,987 |
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The map label for this gene is 189183743
Identifier: 189183743
GI number: 189183743
Start: 881162
End: 881926
Strand: Reverse
Name: 189183743
Synonym: OTT_0836
Alternate gene names: NA
Gene position: 881926-881162 (Counterclockwise)
Preceding gene: 189183744
Following gene: 189183742
Centisome position: 43.9
GC content: 36.6
Gene sequence:
>765_bases ATGACCACAGATAACAGATACATTAATGATAAAAATCCAGACAAAAAACAAGAGCCTGGATTTATTAATCAACTAAAATT GATACTACAGCAACTCAAGGCTTTGTACTTAACACTTAAATCAGTACTAGAAAATAACCCACAACAAAAAACACAAAATA TTAAAAAATTACTTACACTACTTGCTCAACTTCAAAGTAATTTAGAAGAGCAGATTGGTAAATCTAGTAATGATGTATCA AAAACACAAGAGCAAAGTAACCAACAAAACAATAATAAGCAAAAAGAAAGTGGTAATGTTGGTAATTCCTGCTCAGTAAC TTCGCCAGCTGCTGCAGAATCATCAAAACAAACTCAGAATGTATCACCTCAGCCACCACCACCGCCGCCGCCGCCTCCTC CTCCACCGCCACCACTACCTCTGGCTTCTCTAATTCAGAAAGGAAAAGCAGCAACATCATCTAAAACCCCCCCCCAAAAT CCTGATGATCTTTTTATGGCTGAACTGACAAAGAGCTTAAAAAGCCGTAGGGCTAAGATAGCAGGTGATATAGATCAAAA TGCAACTGAAAAAGAGGAACCTAAAAATACAAAGGCACATAAATTAGAAGGTATAGCAAGTAGCTTATCAAAAGTCATAC CCTATTCTCCTAACAACAAGAATGATAATGGTCCAAAAAAACCAGTAGTTCCTCCTAAACCAAGTTTTGCAGATCAAGTA ACAAGTAAATCGAATCAAAGTAAGAACAAAAGTAGAGACAGGTAA
Upstream 100 bases:
>100_bases TAAGTAAAATAGTATAGTAGAAATACTTTTAGTAATTCACATTAAATAGTGATATACTAAATTATATAGTAATATTAAAA AATACAAAAAAGTAATTATT
Downstream 100 bases:
>100_bases CGCGCTTAGCTAAAGGATATATTCTCACATTATATTTTACACATATAAAAGCTAATTTTGAGCTTTTATATGTAATTGCT CTTCTTGATAAAACGTTACA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 254; Mature: 253
Protein sequence:
>254_residues MTTDNRYINDKNPDKKQEPGFINQLKLILQQLKALYLTLKSVLENNPQQKTQNIKKLLTLLAQLQSNLEEQIGKSSNDVS KTQEQSNQQNNNKQKESGNVGNSCSVTSPAAAESSKQTQNVSPQPPPPPPPPPPPPPPLPLASLIQKGKAATSSKTPPQN PDDLFMAELTKSLKSRRAKIAGDIDQNATEKEEPKNTKAHKLEGIASSLSKVIPYSPNNKNDNGPKKPVVPPKPSFADQV TSKSNQSKNKSRDR
Sequences:
>Translated_254_residues MTTDNRYINDKNPDKKQEPGFINQLKLILQQLKALYLTLKSVLENNPQQKTQNIKKLLTLLAQLQSNLEEQIGKSSNDVS KTQEQSNQQNNNKQKESGNVGNSCSVTSPAAAESSKQTQNVSPQPPPPPPPPPPPPPPLPLASLIQKGKAATSSKTPPQN PDDLFMAELTKSLKSRRAKIAGDIDQNATEKEEPKNTKAHKLEGIASSLSKVIPYSPNNKNDNGPKKPVVPPKPSFADQV TSKSNQSKNKSRDR >Mature_253_residues TTDNRYINDKNPDKKQEPGFINQLKLILQQLKALYLTLKSVLENNPQQKTQNIKKLLTLLAQLQSNLEEQIGKSSNDVSK TQEQSNQQNNNKQKESGNVGNSCSVTSPAAAESSKQTQNVSPQPPPPPPPPPPPPPPLPLASLIQKGKAATSSKTPPQNP DDLFMAELTKSLKSRRAKIAGDIDQNATEKEEPKNTKAHKLEGIASSLSKVIPYSPNNKNDNGPKKPVVPPKPSFADQVT SKSNQSKNKSRDR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27762; Mature: 27631
Theoretical pI: Translated: 10.45; Mature: 10.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 0.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTDNRYINDKNPDKKQEPGFINQLKLILQQLKALYLTLKSVLENNPQQKTQNIKKLLTL CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH LAQLQSNLEEQIGKSSNDVSKTQEQSNQQNNNKQKESGNVGNSCSVTSPAAAESSKQTQN HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCHHHHCCCCCCCCCCCCCHHHHHHHHHCC VSPQPPPPPPPPPPPPPPLPLASLIQKGKAATSSKTPPQNPDDLFMAELTKSLKSRRAKI CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH AGDIDQNATEKEEPKNTKAHKLEGIASSLSKVIPYSPNNKNDNGPKKPVVPPKPSFADQV HCCCCCCCCCHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHH TSKSNQSKNKSRDR HHHHHHHHHCCCCC >Mature Secondary Structure TTDNRYINDKNPDKKQEPGFINQLKLILQQLKALYLTLKSVLENNPQQKTQNIKKLLTL CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH LAQLQSNLEEQIGKSSNDVSKTQEQSNQQNNNKQKESGNVGNSCSVTSPAAAESSKQTQN HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCHHHHCCCCCCCCCCCCCHHHHHHHHHCC VSPQPPPPPPPPPPPPPPLPLASLIQKGKAATSSKTPPQNPDDLFMAELTKSLKSRRAKI CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH AGDIDQNATEKEEPKNTKAHKLEGIASSLSKVIPYSPNNKNDNGPKKPVVPPKPSFADQV HCCCCCCCCCHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHH TSKSNQSKNKSRDR HHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA