| Definition | Orientia tsutsugamushi str. Ikeda, complete genome. |
|---|---|
| Accession | NC_010793 |
| Length | 2,008,987 |
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The map label for this gene is 189183670
Identifier: 189183670
GI number: 189183670
Start: 788811
End: 790436
Strand: Direct
Name: 189183670
Synonym: OTT_0763
Alternate gene names: NA
Gene position: 788811-790436 (Clockwise)
Preceding gene: 189183667
Following gene: 189183672
Centisome position: 39.26
GC content: 29.34
Gene sequence:
>1626_bases ATGATATGTTATTCGAATCGTACGATCAATCTAAATGTATTAGCAGACACATTAACCGTATTAACTTCAAATATTGAGAT ATTAAAATACTTATATACTTTAGACATACCTTTTTCTGCTATTTCCACTAAGTTATTTCGTATAGGAGAAGTTAATGCAC AAAAGATTTTGAAATGGAGATTGGGAGTTTCTGAGCTAACGCTTGAAAATCTTTCAGGAAACACATATGAAGAAATATGT GAAAAAAGAGCGGATGTTTTGAATTTTCTGAAAACAGCAAGATCAGAGTATTATGCGATTAACAGTGCTAATGATGATGT TGATAATAATATTACGAATCAGACAATGATAAAACAAAATACATTTGACCTATACATTACTAACAACAATAAATTAGAAA ATCATTCATGGTCTATGAAACTTTTTTTAAGCAAAATTCTTCAAAAAAATCAGCAAAGTAATTACTCAAATAAAGATTTT GATGGATTCATTTCTAAGCTAGACTTAGATAATTTAGAAAAACTACTACAACCAGCTAGAATAATAGAAGCTGCAAGTAT CACAAGTATGATATGTTATTCGAATCGTACGATCAATCTAGATGTATTAGCAGACACATTAACCGTATTAACTTCAAATA TTGAGATATTAAAATACTTATACACCCTAGACATACCTTTTTCTGCTATTTCCGGTAAGTTAGGTCATATAGAATTTAGT GCTAAAGATTGTTTGGAGAAACTATTTAAAATTCTTGAGATAAAAAGAGAATCGCAGAAAAATGTCAAAGATTTTGTAAG CTACTTCAAAATACTTGAACAGAAATTAGATATTGTGAAAAATAAGGATCTAGAAACTCGTAAAAACGTCATAGATAGCA TGCTCAAAGAATATAGCAATATTCAAGAGACAAATAATGATAATGATGAAAAAATAAGCGAAACAGTATCTGAATTAACA AATAACTTAACAATCAATAATATTCAATCTCAGATAATAGATAAACACAGAGAAGATGATATTGAAACCAATAGTGATGA GATAAATATGCATAGTAATAGTCAAGAATTAGCTAACATATCAGATTCTGTGCTAGTAGCTACAGAAGAAGTGCAATATT GTTATGAAGAATCTGTATCTACAAAGAATGAGATATACCTAGAAGATGGTGATTTTGCAAAGAATAGTAATGAGATAAAT ACGAGTGATCCAGAATTAAATGATATATTAGAGCTTTCGCTAGCTATAGAGGATGTAAAAAATAATGTAGTATTCGAAGC AGTAAATAACTCAACTGTTAACAATCAATCTCAACCGATAGAAAGATATCAAGAAAATAATATTGAAAATCTGCAAATAA TAAGACAGATGCATACTGAAGAAGTTATGCCATCAGTAGAAAAGCGAAAATTATGTTATGATAAGCATGAAGATCTTTAT ACTCATAAACGTAAGTGTAATAATCATGAGGTAAATAACGGTAATATCACAGAACTAGCACTAAATGAACAAGAAAATAG CATTAATGTAGATTGTCCTACTTCTGTCTCCATTAGTCATCTAGCAGGAGAATCGACTTACATCCTTAGTGATACAGCAG GGTATTCTGCTTACATCTTGGAATAA
Upstream 100 bases:
>100_bases CCTACGTTCATGCTATAAATTCATTTCTAAGCTAGACTTAGATAATTTAGAAAAACTACTACAACCAGCTAGAATAATAC AAGCTTCCAATATCACATGT
Downstream 100 bases:
>100_bases GTATCAAAAGAGATATCAGATCAAGTAAGAATTAATAATCCCCTTTGATTATTATTTGGTATTAATCTCTTTTTTTTCCA CTCTTGATATATCTTGCAAA
Product: repeat-containing protein D
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 541; Mature: 541
Protein sequence:
>541_residues MICYSNRTINLNVLADTLTVLTSNIEILKYLYTLDIPFSAISTKLFRIGEVNAQKILKWRLGVSELTLENLSGNTYEEIC EKRADVLNFLKTARSEYYAINSANDDVDNNITNQTMIKQNTFDLYITNNNKLENHSWSMKLFLSKILQKNQQSNYSNKDF DGFISKLDLDNLEKLLQPARIIEAASITSMICYSNRTINLDVLADTLTVLTSNIEILKYLYTLDIPFSAISGKLGHIEFS AKDCLEKLFKILEIKRESQKNVKDFVSYFKILEQKLDIVKNKDLETRKNVIDSMLKEYSNIQETNNDNDEKISETVSELT NNLTINNIQSQIIDKHREDDIETNSDEINMHSNSQELANISDSVLVATEEVQYCYEESVSTKNEIYLEDGDFAKNSNEIN TSDPELNDILELSLAIEDVKNNVVFEAVNNSTVNNQSQPIERYQENNIENLQIIRQMHTEEVMPSVEKRKLCYDKHEDLY THKRKCNNHEVNNGNITELALNEQENSINVDCPTSVSISHLAGESTYILSDTAGYSAYILE
Sequences:
>Translated_541_residues MICYSNRTINLNVLADTLTVLTSNIEILKYLYTLDIPFSAISTKLFRIGEVNAQKILKWRLGVSELTLENLSGNTYEEIC EKRADVLNFLKTARSEYYAINSANDDVDNNITNQTMIKQNTFDLYITNNNKLENHSWSMKLFLSKILQKNQQSNYSNKDF DGFISKLDLDNLEKLLQPARIIEAASITSMICYSNRTINLDVLADTLTVLTSNIEILKYLYTLDIPFSAISGKLGHIEFS AKDCLEKLFKILEIKRESQKNVKDFVSYFKILEQKLDIVKNKDLETRKNVIDSMLKEYSNIQETNNDNDEKISETVSELT NNLTINNIQSQIIDKHREDDIETNSDEINMHSNSQELANISDSVLVATEEVQYCYEESVSTKNEIYLEDGDFAKNSNEIN TSDPELNDILELSLAIEDVKNNVVFEAVNNSTVNNQSQPIERYQENNIENLQIIRQMHTEEVMPSVEKRKLCYDKHEDLY THKRKCNNHEVNNGNITELALNEQENSINVDCPTSVSISHLAGESTYILSDTAGYSAYILE >Mature_541_residues MICYSNRTINLNVLADTLTVLTSNIEILKYLYTLDIPFSAISTKLFRIGEVNAQKILKWRLGVSELTLENLSGNTYEEIC EKRADVLNFLKTARSEYYAINSANDDVDNNITNQTMIKQNTFDLYITNNNKLENHSWSMKLFLSKILQKNQQSNYSNKDF DGFISKLDLDNLEKLLQPARIIEAASITSMICYSNRTINLDVLADTLTVLTSNIEILKYLYTLDIPFSAISGKLGHIEFS AKDCLEKLFKILEIKRESQKNVKDFVSYFKILEQKLDIVKNKDLETRKNVIDSMLKEYSNIQETNNDNDEKISETVSELT NNLTINNIQSQIIDKHREDDIETNSDEINMHSNSQELANISDSVLVATEEVQYCYEESVSTKNEIYLEDGDFAKNSNEIN TSDPELNDILELSLAIEDVKNNVVFEAVNNSTVNNQSQPIERYQENNIENLQIIRQMHTEEVMPSVEKRKLCYDKHEDLY THKRKCNNHEVNNGNITELALNEQENSINVDCPTSVSISHLAGESTYILSDTAGYSAYILE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 62001; Mature: 62001
Theoretical pI: Translated: 4.41; Mature: 4.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MICYSNRTINLNVLADTLTVLTSNIEILKYLYTLDIPFSAISTKLFRIGEVNAQKILKWR CEEECCCEEEEEEHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHH LGVSELTLENLSGNTYEEICEKRADVLNFLKTARSEYYAINSANDDVDNNITNQTMIKQN CCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCCCCCCEEEECC TFDLYITNNNKLENHSWSMKLFLSKILQKNQQSNYSNKDFDGFISKLDLDNLEKLLQPAR CEEEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCHHHHHHHHHHHH IIEAASITSMICYSNRTINLDVLADTLTVLTSNIEILKYLYTLDIPFSAISGKLGHIEFS HHHHHHHHHHHEECCCEEEEHHHHHHHHHHHCCHHHHHHHHHHCCCHHHHCCCCCEEEEC AKDCLEKLFKILEIKRESQKNVKDFVSYFKILEQKLDIVKNKDLETRKNVIDSMLKEYSN HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH IQETNNDNDEKISETVSELTNNLTINNIQSQIIDKHREDDIETNSDEINMHSNSQELANI HHHCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCEEECCCHHHHHCC SDSVLVATEEVQYCYEESVSTKNEIYLEDGDFAKNSNEINTSDPELNDILELSLAIEDVK CCCEEEEHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH NNVVFEAVNNSTVNNQSQPIERYQENNIENLQIIRQMHTEEVMPSVEKRKLCYDKHEDLY CCEEEEECCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH THKRKCNNHEVNNGNITELALNEQENSINVDCPTSVSISHLAGESTYILSDTAGYSAYIL HHHHCCCCCCCCCCCEEEEEECCCCCCEEECCCCCCCHHHHCCCCEEEEECCCCCEEEEE E C >Mature Secondary Structure MICYSNRTINLNVLADTLTVLTSNIEILKYLYTLDIPFSAISTKLFRIGEVNAQKILKWR CEEECCCEEEEEEHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHH LGVSELTLENLSGNTYEEICEKRADVLNFLKTARSEYYAINSANDDVDNNITNQTMIKQN CCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCCCCCCEEEECC TFDLYITNNNKLENHSWSMKLFLSKILQKNQQSNYSNKDFDGFISKLDLDNLEKLLQPAR CEEEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCHHHHHHHHHHHH IIEAASITSMICYSNRTINLDVLADTLTVLTSNIEILKYLYTLDIPFSAISGKLGHIEFS HHHHHHHHHHHEECCCEEEEHHHHHHHHHHHCCHHHHHHHHHHCCCHHHHCCCCCEEEEC AKDCLEKLFKILEIKRESQKNVKDFVSYFKILEQKLDIVKNKDLETRKNVIDSMLKEYSN HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH IQETNNDNDEKISETVSELTNNLTINNIQSQIIDKHREDDIETNSDEINMHSNSQELANI HHHCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCEEECCCHHHHHCC SDSVLVATEEVQYCYEESVSTKNEIYLEDGDFAKNSNEINTSDPELNDILELSLAIEDVK CCCEEEEHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH NNVVFEAVNNSTVNNQSQPIERYQENNIENLQIIRQMHTEEVMPSVEKRKLCYDKHEDLY CCEEEEECCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH THKRKCNNHEVNNGNITELALNEQENSINVDCPTSVSISHLAGESTYILSDTAGYSAYIL HHHHCCCCCCCCCCCEEEEEECCCCCCEEECCCCCCCHHHHCCCCEEEEECCCCCEEEEE E C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA