| Definition | Orientia tsutsugamushi str. Ikeda, complete genome. |
|---|---|
| Accession | NC_010793 |
| Length | 2,008,987 |
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The map label for this gene is kefB [H]
Identifier: 189183588
GI number: 189183588
Start: 709750
End: 711492
Strand: Reverse
Name: kefB [H]
Synonym: OTT_0681
Alternate gene names: 189183588
Gene position: 711492-709750 (Counterclockwise)
Preceding gene: 189183591
Following gene: 189183587
Centisome position: 35.42
GC content: 32.87
Gene sequence:
>1743_bases ATGGAATCTTATGACTTTTTACCAAATATCGTTATACTACTTGCTACTGCAATTTGTATTGTAATAGTTTTTAAAAAACT AAAGCTTAGTCCTGTACTTGGATATTTGGTAGCTGGAGCTCTAATTGGTGATCATGGCCTTAAAATTGTCAACGTTCAAT ATACTAGTGCTATTGCTGAATTTGGAGTAGTTTTTTTATTATTTGCGATTGGGTTAGAATTATCAATTGAAAGATTAAAA GCCATGAGAAGGTACGTCTTTGGCTTAGGATCGTTACAAGTGATCATCACTAGTGTAATAATCGGTGGTTGTGTCATGTC ATATTATGATAATGTTGATGTATCAATTATTATTGGAACAGTGTTAGCTCTGTCTTCTACCGCTATCGTTCTTCAGGTAA TTGAAGAAAGTCGTAGCCAGTCCAGTCAAGTTGGTAGAGTTGCATTATCAGTATTACTGATGCAAGATTTTGCTGTAGTA CCATTACTTGTAATACTACCAATGCTATCTAATAAAACAGACATATCTATTGCTCAAGCTATGGGTATTGCTCTGGTTAA GGCTATGATAGCACTAATAGTCATATTTATTACTGGTCAACTATTCTTAAGACCTTTATTCAAAGTAATTTCTATTGATA AACCACCTGGAAGTACAAATGAATTATTCATAGCTACAACTCTACTGATTGTACTATCTGCTGCTTGGGGAACAAGTCAT CAAGGTTTATCACTTGCACTAGGTGCATTTGTTTCAGGTATATTAGTGGCTGAAACTGAATTTAGATTACAAGCAGAAGA AAGCATATATCCATTTAAGGGGTTATTACTTGGCTTATTCTTCATGTCTGTAGGAATGCATATCAATGTTAATGAAATTA TTCAAAATCTGCAAACAATCTTGGTTTGCTCAATAGGATTGATTTTAATTAAGGCAACTATTGTTACTGGCTTGTGTATT CTATTTAACTTTAATAAGAGTATTGCATTACATACAGGATTACTGCTATCTCAAGGTAGTGAGTTTGCTTTTATTTTGTT TAATGAAGCAATGAAGGAGGGAATTATTGAAAACTCAATTGGTAAAACTTTATTATTAGTTGTAACTTGTACTATGGCTT TAACTCCATTATTATCTGTAGCGGGAGCAAAAATTGCTGACCTGCTTGGCAATGGTAAAAAGGAGGAGTATAATCCACTT CAAATTATTGAACAAGGAGCTAGAGATTTAACTAATCATATTATTATAGCAGGATTTGGCCGTGTAGGTAGAATGGTAGC AAATGTTCTAGAAGCAGAAAATATACGTTATATTGCAATTGATATTAATGAACAAGCTGTAAAAGAAGATAATCATAGTA GTTTTCCTATTGTTCAGGGAGATATTTCTCAAGTTGACACATTAAAAGCGCTAGGAATAGAGCGTGCATCAGCAGTTATT TTGTCTTTAAGTAATGAAATTACCATCAAAAAAACTCTAAAAGCTATATCAAATAATTTTTCACATATTGCTATAATTGT AAAAGCAAAAGATTTGCAGCGCTCTAATGAATTCTATGAATGTGGAGCAACAGTTATTGTTCCATCAGATTATGAGGTTG GATTACAATTAGGTAGCGAAGTCTTAAAAGTAATAGGCATTAGCGATTACGAAGTTAATAGAATTAAAAACCAATTTCGT TCAGGTAATTACGTAGCTACAAAGCAAAGCCAAACCCTAGATAATGATGATGAAAACGAGTAG
Upstream 100 bases:
>100_bases TAAGTATAATGTATAATAGTTTATTGCCATAGAATGTAAAGTAACTCCAGATATATATTACGTTCTTAAAATCTAACTAA TTAAGTTTTAGAAGAGCAGA
Downstream 100 bases:
>100_bases AATTTACAGCTTTATTATAACAGTTATAATTATGGTTACTGTATTTATCAATGCTGCGTTATCAGATAACAAAAATACTA AAATTCCAAGGTTTGTTTCA
Product: glutathione-regulated potassium-efflux system protein KefB
Products: Proton [Cytoplasm]; K (I) [Periplasm] [C]
Alternate protein names: K(+)/H(+) antiporter [H]
Number of amino acids: Translated: 580; Mature: 580
Protein sequence:
>580_residues MESYDFLPNIVILLATAICIVIVFKKLKLSPVLGYLVAGALIGDHGLKIVNVQYTSAIAEFGVVFLLFAIGLELSIERLK AMRRYVFGLGSLQVIITSVIIGGCVMSYYDNVDVSIIIGTVLALSSTAIVLQVIEESRSQSSQVGRVALSVLLMQDFAVV PLLVILPMLSNKTDISIAQAMGIALVKAMIALIVIFITGQLFLRPLFKVISIDKPPGSTNELFIATTLLIVLSAAWGTSH QGLSLALGAFVSGILVAETEFRLQAEESIYPFKGLLLGLFFMSVGMHINVNEIIQNLQTILVCSIGLILIKATIVTGLCI LFNFNKSIALHTGLLLSQGSEFAFILFNEAMKEGIIENSIGKTLLLVVTCTMALTPLLSVAGAKIADLLGNGKKEEYNPL QIIEQGARDLTNHIIIAGFGRVGRMVANVLEAENIRYIAIDINEQAVKEDNHSSFPIVQGDISQVDTLKALGIERASAVI LSLSNEITIKKTLKAISNNFSHIAIIVKAKDLQRSNEFYECGATVIVPSDYEVGLQLGSEVLKVIGISDYEVNRIKNQFR SGNYVATKQSQTLDNDDENE
Sequences:
>Translated_580_residues MESYDFLPNIVILLATAICIVIVFKKLKLSPVLGYLVAGALIGDHGLKIVNVQYTSAIAEFGVVFLLFAIGLELSIERLK AMRRYVFGLGSLQVIITSVIIGGCVMSYYDNVDVSIIIGTVLALSSTAIVLQVIEESRSQSSQVGRVALSVLLMQDFAVV PLLVILPMLSNKTDISIAQAMGIALVKAMIALIVIFITGQLFLRPLFKVISIDKPPGSTNELFIATTLLIVLSAAWGTSH QGLSLALGAFVSGILVAETEFRLQAEESIYPFKGLLLGLFFMSVGMHINVNEIIQNLQTILVCSIGLILIKATIVTGLCI LFNFNKSIALHTGLLLSQGSEFAFILFNEAMKEGIIENSIGKTLLLVVTCTMALTPLLSVAGAKIADLLGNGKKEEYNPL QIIEQGARDLTNHIIIAGFGRVGRMVANVLEAENIRYIAIDINEQAVKEDNHSSFPIVQGDISQVDTLKALGIERASAVI LSLSNEITIKKTLKAISNNFSHIAIIVKAKDLQRSNEFYECGATVIVPSDYEVGLQLGSEVLKVIGISDYEVNRIKNQFR SGNYVATKQSQTLDNDDENE >Mature_580_residues MESYDFLPNIVILLATAICIVIVFKKLKLSPVLGYLVAGALIGDHGLKIVNVQYTSAIAEFGVVFLLFAIGLELSIERLK AMRRYVFGLGSLQVIITSVIIGGCVMSYYDNVDVSIIIGTVLALSSTAIVLQVIEESRSQSSQVGRVALSVLLMQDFAVV PLLVILPMLSNKTDISIAQAMGIALVKAMIALIVIFITGQLFLRPLFKVISIDKPPGSTNELFIATTLLIVLSAAWGTSH QGLSLALGAFVSGILVAETEFRLQAEESIYPFKGLLLGLFFMSVGMHINVNEIIQNLQTILVCSIGLILIKATIVTGLCI LFNFNKSIALHTGLLLSQGSEFAFILFNEAMKEGIIENSIGKTLLLVVTCTMALTPLLSVAGAKIADLLGNGKKEEYNPL QIIEQGARDLTNHIIIAGFGRVGRMVANVLEAENIRYIAIDINEQAVKEDNHSSFPIVQGDISQVDTLKALGIERASAVI LSLSNEITIKKTLKAISNNFSHIAIIVKAKDLQRSNEFYECGATVIVPSDYEVGLQLGSEVLKVIGISDYEVNRIKNQFR SGNYVATKQSQTLDNDDENE
Specific function: Transport system that facilitates potassium-efflux, possibly by potassium-proton antiport [H]
COG id: COG0475
COG function: function code P; Kef-type K+ transport systems, membrane components
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 RCK N-terminal domain [H]
Homologues:
Organism=Homo sapiens, GI157388921, Length=383, Percent_Identity=24.8041775456919, Blast_Score=74, Evalue=3e-13, Organism=Escherichia coli, GI1786232, Length=578, Percent_Identity=31.8339100346021, Blast_Score=288, Evalue=1e-78, Organism=Escherichia coli, GI1789749, Length=561, Percent_Identity=33.1550802139037, Blast_Score=281, Evalue=8e-77, Organism=Escherichia coli, GI1786685, Length=522, Percent_Identity=26.2452107279693, Blast_Score=136, Evalue=3e-33,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006153 - InterPro: IPR004771 - InterPro: IPR006036 - InterPro: IPR016040 - InterPro: IPR003148 [H]
Pfam domain/function: PF00999 Na_H_Exchanger; PF02254 TrkA_N [H]
EC number: NA
Molecular weight: Translated: 62839; Mature: 62839
Theoretical pI: Translated: 5.34; Mature: 5.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MESYDFLPNIVILLATAICIVIVFKKLKLSPVLGYLVAGALIGDHGLKIVNVQYTSAIAE CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEHHHHHHHH FGVVFLLFAIGLELSIERLKAMRRYVFGLGSLQVIITSVIIGGCVMSYYDNVDVSIIIGT HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH VLALSSTAIVLQVIEESRSQSSQVGRVALSVLLMQDFAVVPLLVILPMLSNKTDISIAQA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH MGIALVKAMIALIVIFITGQLFLRPLFKVISIDKPPGSTNELFIATTLLIVLSAAWGTSH HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCC QGLSLALGAFVSGILVAETEFRLQAEESIYPFKGLLLGLFFMSVGMHINVNEIIQNLQTI CCHHHHHHHHHHHHHEEEHHHHEECCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHH LVCSIGLILIKATIVTGLCILFNFNKSIALHTGLLLSQGSEFAFILFNEAMKEGIIENSI HHHHHHHHHHHHHHHHHHHHEEECCCCHHHHHHHHHCCCCCEEEEEEHHHHHCCHHHHHH GKTLLLVVTCTMALTPLLSVAGAKIADLLGNGKKEEYNPLQIIEQGARDLTNHIIIAGFG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCEEEEECH RVGRMVANVLEAENIRYIAIDINEQAVKEDNHSSFPIVQGDISQVDTLKALGIERASAVI HHHHHHHHHHHHCCEEEEEEECCHHHHCCCCCCCCCEEECCHHHHHHHHHHCHHHHHEEE LSLSNEITIKKTLKAISNNFSHIAIIVKAKDLQRSNEFYECGATVIVPSDYEVGLQLGSE EEECCCCHHHHHHHHHHCCCCEEEEEEEECHHHHCCCHHHCCCEEEECCCHHHHHHHHHH VLKVIGISDYEVNRIKNQFRSGNYVATKQSQTLDNDDENE HHHHHCCCCHHHHHHHHHHCCCCEEEECCCCCCCCCCCCC >Mature Secondary Structure MESYDFLPNIVILLATAICIVIVFKKLKLSPVLGYLVAGALIGDHGLKIVNVQYTSAIAE CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEHHHHHHHH FGVVFLLFAIGLELSIERLKAMRRYVFGLGSLQVIITSVIIGGCVMSYYDNVDVSIIIGT HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH VLALSSTAIVLQVIEESRSQSSQVGRVALSVLLMQDFAVVPLLVILPMLSNKTDISIAQA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH MGIALVKAMIALIVIFITGQLFLRPLFKVISIDKPPGSTNELFIATTLLIVLSAAWGTSH HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCC QGLSLALGAFVSGILVAETEFRLQAEESIYPFKGLLLGLFFMSVGMHINVNEIIQNLQTI CCHHHHHHHHHHHHHEEEHHHHEECCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHH LVCSIGLILIKATIVTGLCILFNFNKSIALHTGLLLSQGSEFAFILFNEAMKEGIIENSI HHHHHHHHHHHHHHHHHHHHEEECCCCHHHHHHHHHCCCCCEEEEEEHHHHHCCHHHHHH GKTLLLVVTCTMALTPLLSVAGAKIADLLGNGKKEEYNPLQIIEQGARDLTNHIIIAGFG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCEEEEECH RVGRMVANVLEAENIRYIAIDINEQAVKEDNHSSFPIVQGDISQVDTLKALGIERASAVI HHHHHHHHHHHHCCEEEEEEECCHHHHCCCCCCCCCEEECCHHHHHHHHHHCHHHHHEEE LSLSNEITIKKTLKAISNNFSHIAIIVKAKDLQRSNEFYECGATVIVPSDYEVGLQLGSE EEECCCCHHHHHHHHHHCCCCEEEEEEEECHHHHCCCHHHCCCEEEECCCHHHHHHHHHH VLKVIGISDYEVNRIKNQFRSGNYVATKQSQTLDNDDENE HHHHHCCCCHHHHHHHHHHCCCCEEEECCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Proton [Periplasm]; K (I) [Cytoplasm] [C]
Specific reaction: Proton [Periplasm] + K (I) [Cytoplasm] = Proton [Cytoplasm] + K (I) [Periplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA