| Definition | Orientia tsutsugamushi str. Ikeda, complete genome. |
|---|---|
| Accession | NC_010793 |
| Length | 2,008,987 |
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The map label for this gene is 189183587
Identifier: 189183587
GI number: 189183587
Start: 709272
End: 709769
Strand: Reverse
Name: 189183587
Synonym: OTT_0680
Alternate gene names: NA
Gene position: 709769-709272 (Counterclockwise)
Preceding gene: 189183588
Following gene: 189183586
Centisome position: 35.33
GC content: 29.92
Gene sequence:
>498_bases ATGATGATGAAAACGAGTAGAATTTACAGCTTTATTATAACAGTTATAATTATGGTTACTGTATTTATCAATGCTGCGTT ATCAGATAACAAAAATACTAAAATTCCAAGGTTTGTTTCAACCAAGACCAATGAAATCAACATGAGGACAGGCCCAAATA TCAAATATCCAATTAAGTGGATATTTACCAAAAAAGATGAGCCATTAGAAATAGTCGATAAATTTGACCAATGGTACTAT GTGCGCGATATAACAGGTGACTTTGGATGGATTCACTCAAGTGTTTTATCTCAAAAAAGAACAGTAGTTATTAACAGTAA TAAAATACAGAATCTTTATAAATCATCTAATTATGAAAGTAGAATTATTGCATATCTTGAGCCTAAAATAAGGTGTGAAT TAAAAAAATGCACAGCTTTAATGTGTAAGTTACATTGCAAAAATTATATTGGCTGGGTAGATCGGAAAATTTTATGGGGG GTATATGATCATGAATAA
Upstream 100 bases:
>100_bases TTAAAAGTAATAGGCATTAGCGATTACGAAGTTAATAGAATTAAAAACCAATTTCGTTCAGGTAATTACGTAGCTACAAA GCAAAGCCAAACCCTAGATA
Downstream 100 bases:
>100_bases ATATATTTACAAAAGTTTATTTTTTATAAATATAGTTAATAAGTAATTTGAATTATAGTACTAATAGTGATATAGTAATA CCATAATTTATATTATCTTA
Product: hypothetical protein
Products: NA
Alternate protein names: Signal Peptide
Number of amino acids: Translated: 165; Mature: 165
Protein sequence:
>165_residues MMMKTSRIYSFIITVIIMVTVFINAALSDNKNTKIPRFVSTKTNEINMRTGPNIKYPIKWIFTKKDEPLEIVDKFDQWYY VRDITGDFGWIHSSVLSQKRTVVINSNKIQNLYKSSNYESRIIAYLEPKIRCELKKCTALMCKLHCKNYIGWVDRKILWG VYDHE
Sequences:
>Translated_165_residues MMMKTSRIYSFIITVIIMVTVFINAALSDNKNTKIPRFVSTKTNEINMRTGPNIKYPIKWIFTKKDEPLEIVDKFDQWYY VRDITGDFGWIHSSVLSQKRTVVINSNKIQNLYKSSNYESRIIAYLEPKIRCELKKCTALMCKLHCKNYIGWVDRKILWG VYDHE >Mature_165_residues MMMKTSRIYSFIITVIIMVTVFINAALSDNKNTKIPRFVSTKTNEINMRTGPNIKYPIKWIFTKKDEPLEIVDKFDQWYY VRDITGDFGWIHSSVLSQKRTVVINSNKIQNLYKSSNYESRIIAYLEPKIRCELKKCTALMCKLHCKNYIGWVDRKILWG VYDHE
Specific function: Unknown
COG id: COG3807
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19543; Mature: 19543
Theoretical pI: Translated: 9.97; Mature: 9.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 6.1 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 6.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMMKTSRIYSFIITVIIMVTVFINAALSDNKNTKIPRFVSTKTNEINMRTGPNIKYPIKW CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCEEEECCCCCCCCCEEE IFTKKDEPLEIVDKFDQWYYVRDITGDFGWIHSSVLSQKRTVVINSNKIQNLYKSSNYES EEECCCCCHHHHHHHHCEEEEEECCCCHHHHHHHHHCCCCEEEEECHHHHHHHHCCCCCC RIIAYLEPKIRCELKKCTALMCKLHCKNYIGWVDRKILWGVYDHE EEEEEECCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCC >Mature Secondary Structure MMMKTSRIYSFIITVIIMVTVFINAALSDNKNTKIPRFVSTKTNEINMRTGPNIKYPIKW CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCEEEECCCCCCCCCEEE IFTKKDEPLEIVDKFDQWYYVRDITGDFGWIHSSVLSQKRTVVINSNKIQNLYKSSNYES EEECCCCCHHHHHHHHCEEEEEECCCCHHHHHHHHHCCCCEEEEECHHHHHHHHCCCCCC RIIAYLEPKIRCELKKCTALMCKLHCKNYIGWVDRKILWGVYDHE EEEEEECCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA