| Definition | Orientia tsutsugamushi str. Ikeda, complete genome. |
|---|---|
| Accession | NC_010793 |
| Length | 2,008,987 |
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The map label for this gene is bcr2 [H]
Identifier: 189183544
GI number: 189183544
Start: 667002
End: 668207
Strand: Reverse
Name: bcr2 [H]
Synonym: OTT_0637
Alternate gene names: 189183544
Gene position: 668207-667002 (Counterclockwise)
Preceding gene: 189183545
Following gene: 189183543
Centisome position: 33.26
GC content: 30.93
Gene sequence:
>1206_bases ATGCAGAATGATATAATGAAATATAATTTAACAATAGTCACTGTATTAATATTCATTACACAGTTAGCAGTTGATATTTA TATACCTGGATTACCTAGAATAGCAAACGCATTTAACGTTCCAGAACATAAAGTAATGTGGACTGTAAGCTTAAATTTAA TAGGATTATCACTATCAGGATTAGTATATGGCCCATTATCTGATGCAATAGGTCGTAAGAAAGCTTTATTACTAGGAACA ACTATTTTTTGTTTTTCTAGTTTCTTTTGCATATACTCTAGGTCTATTGAATTGGTTGCATTTTGGATACTTTTACAAGG CATTGGAGCAGGAGCAGCTATACCAGTAAGTTTCGCATCCATAAGCGACATATACAAAGGCAATGAACAAGCAAAAATAA TGTCACGTCTACATATGATAATGGCCTTTTCGCCGGTACTTGGCCCAGTAATTGGCAATAGAATATCTTCATATGATGAT AGGTGGTATTTGCCAATAGCAGTTGTTCCTATGATTGCTTTTCCGGCTTTATTGTTATTGATAACTATATTTAAAGAAAC TTTAACCGTAATAACCAAAAAATTTGATTTTAATAATCTTAAAGTCGGCTTTAAGAATGCGCTTGTTAATAAAAATTTTG TATGCTATTCACTCATTCAATCTTTAACATTTTTGTGGTTATGGGCAGATTCAGTAATTTTACCTTTCATTTTTAAAGAC ATGAATATTCCAAGTAGATATTACGAGTACTATATTATAGCATGTATTGGGACTTTTATGATAGCTTCTATAATTAATCA AAAGTTAGTGATATTACATGGAGCAGAAAAAATGTTATTTTATGGAGTTATATTTGTATTATTTGGCGGCATATTATCAA CCTTTAGCTTTACATACTTTGCTGCAAAGTTGCATATAGTTTTATTACTCAAACTAATAGCATCGTTTGGAATTGGATTT ATTTTAGGTAATGCAGCAGCACTATCTGTAGCAACAATTACCAATTACGGAGCTGCAGTTGCACTACTAAGTTCAGCAGA AATGCTTTTTGGTTCATTAGGAGTAGAAATGGCAGGCTATTTTTACAATGGAACAATATTACCAGTTCTATTATTCATAA TAGCAACTTCATTAACTTCTTTATTGATTCTTAAGTGTTATAGCATAATACGCAAAAGTAGTAGTTACACATTTTGTAAA ATGTAA
Upstream 100 bases:
>100_bases ATAAAAAATAGTATAACTAATCTATTAATACTTAAGTGTACTGCATATTGTTTAAAGTTTATAAAATACTGTTAGTTAAT TAAGTTTTATAGGAAATAAT
Downstream 100 bases:
>100_bases ACAACAACATTAAAAAAAGTCCTTAAATATCCAGGTTCTATATTAAGAAAGTCAACATAGATAATATAAATAAAAATCTT TAAATATATGAATGACTTAA
Product: drug resistance transporter, Bcr/CflA family protein
Products: Proton [Cytoplasm]; multidrug [Periplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 401; Mature: 401
Protein sequence:
>401_residues MQNDIMKYNLTIVTVLIFITQLAVDIYIPGLPRIANAFNVPEHKVMWTVSLNLIGLSLSGLVYGPLSDAIGRKKALLLGT TIFCFSSFFCIYSRSIELVAFWILLQGIGAGAAIPVSFASISDIYKGNEQAKIMSRLHMIMAFSPVLGPVIGNRISSYDD RWYLPIAVVPMIAFPALLLLITIFKETLTVITKKFDFNNLKVGFKNALVNKNFVCYSLIQSLTFLWLWADSVILPFIFKD MNIPSRYYEYYIIACIGTFMIASIINQKLVILHGAEKMLFYGVIFVLFGGILSTFSFTYFAAKLHIVLLLKLIASFGIGF ILGNAAALSVATITNYGAAVALLSSAEMLFGSLGVEMAGYFYNGTILPVLLFIIATSLTSLLILKCYSIIRKSSSYTFCK M
Sequences:
>Translated_401_residues MQNDIMKYNLTIVTVLIFITQLAVDIYIPGLPRIANAFNVPEHKVMWTVSLNLIGLSLSGLVYGPLSDAIGRKKALLLGT TIFCFSSFFCIYSRSIELVAFWILLQGIGAGAAIPVSFASISDIYKGNEQAKIMSRLHMIMAFSPVLGPVIGNRISSYDD RWYLPIAVVPMIAFPALLLLITIFKETLTVITKKFDFNNLKVGFKNALVNKNFVCYSLIQSLTFLWLWADSVILPFIFKD MNIPSRYYEYYIIACIGTFMIASIINQKLVILHGAEKMLFYGVIFVLFGGILSTFSFTYFAAKLHIVLLLKLIASFGIGF ILGNAAALSVATITNYGAAVALLSSAEMLFGSLGVEMAGYFYNGTILPVLLFIIATSLTSLLILKCYSIIRKSSSYTFCK M >Mature_401_residues MQNDIMKYNLTIVTVLIFITQLAVDIYIPGLPRIANAFNVPEHKVMWTVSLNLIGLSLSGLVYGPLSDAIGRKKALLLGT TIFCFSSFFCIYSRSIELVAFWILLQGIGAGAAIPVSFASISDIYKGNEQAKIMSRLHMIMAFSPVLGPVIGNRISSYDD RWYLPIAVVPMIAFPALLLLITIFKETLTVITKKFDFNNLKVGFKNALVNKNFVCYSLIQSLTFLWLWADSVILPFIFKD MNIPSRYYEYYIIACIGTFMIASIINQKLVILHGAEKMLFYGVIFVLFGGILSTFSFTYFAAKLHIVLLLKLIASFGIGF ILGNAAALSVATITNYGAAVALLSSAEMLFGSLGVEMAGYFYNGTILPVLLFIIATSLTSLLILKCYSIIRKSSSYTFCK M
Specific function: Involved In Sulfonamide (Sulfathiazole) And Bicyclomycin Resistance. Probable Membrane Translocase. [C]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily. Bcr/CmlA family [H]
Homologues:
Organism=Escherichia coli, GI1788509, Length=274, Percent_Identity=25.9124087591241, Blast_Score=94, Evalue=2e-20, Organism=Escherichia coli, GI1790146, Length=376, Percent_Identity=26.063829787234, Blast_Score=88, Evalue=8e-19, Organism=Escherichia coli, GI48994889, Length=225, Percent_Identity=27.5555555555556, Blast_Score=73, Evalue=3e-14, Organism=Escherichia coli, GI1790794, Length=254, Percent_Identity=21.6535433070866, Blast_Score=64, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004812 - InterPro: IPR020846 - InterPro: IPR011701 - InterPro: IPR016196 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 44409; Mature: 44409
Theoretical pI: Translated: 9.49; Mature: 9.49
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQNDIMKYNLTIVTVLIFITQLAVDIYIPGLPRIANAFNVPEHKVMWTVSLNLIGLSLSG CCCCCEEHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCEEEEEEEEEEEEEEECC LVYGPLSDAIGRKKALLLGTTIFCFSSFFCIYSRSIELVAFWILLQGIGAGAAIPVSFAS EEECCHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCHHHH ISDIYKGNEQAKIMSRLHMIMAFSPVLGPVIGNRISSYDDRWYLPIAVVPMIAFPALLLL HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHH ITIFKETLTVITKKFDFNNLKVGFKNALVNKNFVCYSLIQSLTFLWLWADSVILPFIFKD HHHHHHHHHHHHHHCCCCCCEEEHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC MNIPSRYYEYYIIACIGTFMIASIINQKLVILHGAEKMLFYGVIFVLFGGILSTFSFTYF CCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHH AAKLHIVLLLKLIASFGIGFILGNAAALSVATITNYGAAVALLSSAEMLFGSLGVEMAGY HHHHHHHHHHHHHHHCCHHHHHCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCHHHHHH FYNGTILPVLLFIIATSLTSLLILKCYSIIRKSSSYTFCKM EECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECC >Mature Secondary Structure MQNDIMKYNLTIVTVLIFITQLAVDIYIPGLPRIANAFNVPEHKVMWTVSLNLIGLSLSG CCCCCEEHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCEEEEEEEEEEEEEEECC LVYGPLSDAIGRKKALLLGTTIFCFSSFFCIYSRSIELVAFWILLQGIGAGAAIPVSFAS EEECCHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCHHHH ISDIYKGNEQAKIMSRLHMIMAFSPVLGPVIGNRISSYDDRWYLPIAVVPMIAFPALLLL HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHH ITIFKETLTVITKKFDFNNLKVGFKNALVNKNFVCYSLIQSLTFLWLWADSVILPFIFKD HHHHHHHHHHHHHHCCCCCCEEEHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC MNIPSRYYEYYIIACIGTFMIASIINQKLVILHGAEKMLFYGVIFVLFGGILSTFSFTYF CCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHH AAKLHIVLLLKLIASFGIGFILGNAAALSVATITNYGAAVALLSSAEMLFGSLGVEMAGY HHHHHHHHHHHHHHHCCHHHHHCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCHHHHHH FYNGTILPVLLFIIATSLTSLLILKCYSIIRKSSSYTFCKM EECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Proton [Periplasm]; multidrug [Cytoplasm] [C]
Specific reaction: Proton [Periplasm] + multidrug [Cytoplasm] = Proton [Cytoplasm] + multidrug [Periplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9384377; 9202461 [H]