| Definition | Orientia tsutsugamushi str. Ikeda, complete genome. |
|---|---|
| Accession | NC_010793 |
| Length | 2,008,987 |
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The map label for this gene is 189183543
Identifier: 189183543
GI number: 189183543
Start: 664493
End: 666634
Strand: Reverse
Name: 189183543
Synonym: OTT_0636
Alternate gene names: NA
Gene position: 666634-664493 (Counterclockwise)
Preceding gene: 189183544
Following gene: 189183542
Centisome position: 33.18
GC content: 32.31
Gene sequence:
>2142_bases ATGGATAATAAAAATTTATTTAATCATCACTCTTCAGACGATAAAATAATAAATACTGGTCAGCAACATAACCAGCATGA TAATCTACATCAACAATCAGCAAAAAATAATCACTCTGCTAATCTGCAAGATGTACAGCAAAGCGTTCACAGTTTTGTTA ATGAGCATTTTCAAAAAACTGACATAAATAGATTGCGTGAACAGCATATTACTGATCTTTTGCTACTAGATAAGTTAGTT GATCGTTTATTCTCTCAATTAGATGTAAATTCTAATAACCAAACTTTTAGTTCTATAATTACAATGAGTCGTCAAAGAGC TGATGCAGAACAGGGTATTATGCATTTTAGATATAATGCTCTTCAACCTATATTAGGATCATCTAATACATCTAAAGTAA TTGTACGAGATTGCAGATTGCAAGGTATTTCAGAAGCAGGAATACCAGTAGATAAAAAACCAGGAGAAATTCCAGAACAT TGGTTAGCTGTAATGGCAAATCAAGCTAGAGCTTGCTTTGAATTTACTGACATGTACATAGATTTGAATTTAGCACCGCA CGCAAAGGAAAAGATAGTTAAGTTGCTAAAGGAGTCTAAAGATCAAATAATGCAGCAAAACATTACTGAAAAGAAGCTAG AAAGTATATCTCGTGAATTTAATGAACAATCGCTTAAAATTTTAAAAAAATACAATAATAGCACTGTTGATGTATCCAAA AAGAATATTGCATTAATTAGGGATTATTGTAATTTTAACGACGATCATGAACATGTTATAACTGTTGGCAGTAAAATTCA TACTAGCAATAGCCCTGATAAGCAGCACCCAGTTACTGCTTCAATGATGGTTGCTCCATTATCTAAAGATATTCTTCAAG AGTGTTCCAAAATAGGTGAACTTAATAAGCTAAAATCTAAACACCATAAAAATATTTCAGATATTTATAAACCAATTTTA ACTCAGAAACTGAACCAAACTCCACTATGGTTTCAAGGTTTATCCACATTAGAGCAAGATCTAATTACAAAACACTTTGA TAAAATTACTGATAATAAGCATATTCTTCCTACCTCACTTCGTAATTTGCCTGGGCTAAGAAATGCTTATGTTGAAGTTA GAGGAATAAGTGAAAATGGCAAGTTAGAAAATAGTCATTTAGAATGTCGTTCAGGTACAATAGCTCAATTTTTATACTCA GATAAAAATGAAGCTCAGCGCATAACTAATTCAAATTTTAAAAGAGCAGTTGAACTATCTGGTGACAAAAATCTAAATAT TGAATGCCTAAATACAGAATTTAACCCCAAACAAGGTATATTCCATAATGTTATGGCTGCTGTAATGGGCGAAGAAAGAA AAATATGCAGTCTATTGCGTAAAGGTATTAAATCACTAGAGGTTAACAAGCTTGGAAAAAGCAAAGCAACACTCAACATT ACAGCTACCAACGGAGCCGCAAGATATCACAAAAATGAAGCATTGGATACAATAGCTGATAGATCCAGATCTAATGCAGC TAAAAATCAAATATCATGGCTTATGTGTAAAAGCGGTAAAGATCGTACCGGCATGGTAGCTACAAACAATTTCCTTCAAC AGCTATGTAGTTCTACACAGCAAGATAGTTCTAACATCGCTAATTCAGTAATGATGTCTAATCATTCAGAATTTCTAGCT GGCCATCATGGTAGTAGCAGAGGCGCAGCTGGATTAAAAGCTGGTGGAGTGTTTACAGGGTTAAAAAAGCACATTCTGTC ACGATATAAAAGTCGTATGACTCCTTCTGCTATAGCTGATACAAACTATATTAAATTTAATTCACTTGGGCATAAAATTG CAAATAAGATAAGTGATATAAAAAATACTGTACTAATTTCTATTAAAGCAATATCTAAGTCTAATACTACTAAGCATAAA CGTGAACATCTCAATAATAATCGTGAAAATTCACAAGCTTCAGCACAGCAAATAAACTATAAGAATAATCTTAATCTCTA TCAAGATATAAAGCTTGGTAGTGCAGTAATCTCTACTATAAAAAACGGCAACATTAAAATGCATCAGACAAAAGATCAGC AACTTAATTTAAATGCAATACCAACTTCACATAAGAAGAATAGTAAGTCTAGGCTTATATAA
Upstream 100 bases:
>100_bases TCATAAAATGAGTATTTTTTGCCTTTTTTAAAAAAATAACATAATATTTGCATAGATACTATAGTTCTGCAAAAATTGAA ATAAGGAGAACAAATTATTT
Downstream 100 bases:
>100_bases AAAATAATGGTTGCGTGACTTAGTATTAAGTAATAAATTGAAATATATTGTTTAAATATATACAAACTATAAAAGTTAAC AAATGTTAGTTTCTAACTAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 713; Mature: 713
Protein sequence:
>713_residues MDNKNLFNHHSSDDKIINTGQQHNQHDNLHQQSAKNNHSANLQDVQQSVHSFVNEHFQKTDINRLREQHITDLLLLDKLV DRLFSQLDVNSNNQTFSSIITMSRQRADAEQGIMHFRYNALQPILGSSNTSKVIVRDCRLQGISEAGIPVDKKPGEIPEH WLAVMANQARACFEFTDMYIDLNLAPHAKEKIVKLLKESKDQIMQQNITEKKLESISREFNEQSLKILKKYNNSTVDVSK KNIALIRDYCNFNDDHEHVITVGSKIHTSNSPDKQHPVTASMMVAPLSKDILQECSKIGELNKLKSKHHKNISDIYKPIL TQKLNQTPLWFQGLSTLEQDLITKHFDKITDNKHILPTSLRNLPGLRNAYVEVRGISENGKLENSHLECRSGTIAQFLYS DKNEAQRITNSNFKRAVELSGDKNLNIECLNTEFNPKQGIFHNVMAAVMGEERKICSLLRKGIKSLEVNKLGKSKATLNI TATNGAARYHKNEALDTIADRSRSNAAKNQISWLMCKSGKDRTGMVATNNFLQQLCSSTQQDSSNIANSVMMSNHSEFLA GHHGSSRGAAGLKAGGVFTGLKKHILSRYKSRMTPSAIADTNYIKFNSLGHKIANKISDIKNTVLISIKAISKSNTTKHK REHLNNNRENSQASAQQINYKNNLNLYQDIKLGSAVISTIKNGNIKMHQTKDQQLNLNAIPTSHKKNSKSRLI
Sequences:
>Translated_713_residues MDNKNLFNHHSSDDKIINTGQQHNQHDNLHQQSAKNNHSANLQDVQQSVHSFVNEHFQKTDINRLREQHITDLLLLDKLV DRLFSQLDVNSNNQTFSSIITMSRQRADAEQGIMHFRYNALQPILGSSNTSKVIVRDCRLQGISEAGIPVDKKPGEIPEH WLAVMANQARACFEFTDMYIDLNLAPHAKEKIVKLLKESKDQIMQQNITEKKLESISREFNEQSLKILKKYNNSTVDVSK KNIALIRDYCNFNDDHEHVITVGSKIHTSNSPDKQHPVTASMMVAPLSKDILQECSKIGELNKLKSKHHKNISDIYKPIL TQKLNQTPLWFQGLSTLEQDLITKHFDKITDNKHILPTSLRNLPGLRNAYVEVRGISENGKLENSHLECRSGTIAQFLYS DKNEAQRITNSNFKRAVELSGDKNLNIECLNTEFNPKQGIFHNVMAAVMGEERKICSLLRKGIKSLEVNKLGKSKATLNI TATNGAARYHKNEALDTIADRSRSNAAKNQISWLMCKSGKDRTGMVATNNFLQQLCSSTQQDSSNIANSVMMSNHSEFLA GHHGSSRGAAGLKAGGVFTGLKKHILSRYKSRMTPSAIADTNYIKFNSLGHKIANKISDIKNTVLISIKAISKSNTTKHK REHLNNNRENSQASAQQINYKNNLNLYQDIKLGSAVISTIKNGNIKMHQTKDQQLNLNAIPTSHKKNSKSRLI >Mature_713_residues MDNKNLFNHHSSDDKIINTGQQHNQHDNLHQQSAKNNHSANLQDVQQSVHSFVNEHFQKTDINRLREQHITDLLLLDKLV DRLFSQLDVNSNNQTFSSIITMSRQRADAEQGIMHFRYNALQPILGSSNTSKVIVRDCRLQGISEAGIPVDKKPGEIPEH WLAVMANQARACFEFTDMYIDLNLAPHAKEKIVKLLKESKDQIMQQNITEKKLESISREFNEQSLKILKKYNNSTVDVSK KNIALIRDYCNFNDDHEHVITVGSKIHTSNSPDKQHPVTASMMVAPLSKDILQECSKIGELNKLKSKHHKNISDIYKPIL TQKLNQTPLWFQGLSTLEQDLITKHFDKITDNKHILPTSLRNLPGLRNAYVEVRGISENGKLENSHLECRSGTIAQFLYS DKNEAQRITNSNFKRAVELSGDKNLNIECLNTEFNPKQGIFHNVMAAVMGEERKICSLLRKGIKSLEVNKLGKSKATLNI TATNGAARYHKNEALDTIADRSRSNAAKNQISWLMCKSGKDRTGMVATNNFLQQLCSSTQQDSSNIANSVMMSNHSEFLA GHHGSSRGAAGLKAGGVFTGLKKHILSRYKSRMTPSAIADTNYIKFNSLGHKIANKISDIKNTVLISIKAISKSNTTKHK REHLNNNRENSQASAQQINYKNNLNLYQDIKLGSAVISTIKNGNIKMHQTKDQQLNLNAIPTSHKKNSKSRLI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 80324; Mature: 80324
Theoretical pI: Translated: 10.16; Mature: 10.16
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDNKNLFNHHSSDDKIINTGQQHNQHDNLHQQSAKNNHSANLQDVQQSVHSFVNEHFQKT CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHH DINRLREQHITDLLLLDKLVDRLFSQLDVNSNNQTFSSIITMSRQRADAEQGIMHFRYNA HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHH LQPILGSSNTSKVIVRDCRLQGISEAGIPVDKKPGEIPEHWLAVMANQARACFEFTDMYI HHHHHCCCCCCEEEEEHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHEEEEEEE DLNLAPHAKEKIVKLLKESKDQIMQQNITEKKLESISREFNEQSLKILKKYNNSTVDVSK EEECCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECC KNIALIRDYCNFNDDHEHVITVGSKIHTSNSPDKQHPVTASMMVAPLSKDILQECSKIGE CCHHHHHHHHCCCCCCCEEEEECCEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH LNKLKSKHHKNISDIYKPILTQKLNQTPLWFQGLSTLEQDLITKHFDKITDNKHILPTSL HHHHHHHHCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHH RNLPGLRNAYVEVRGISENGKLENSHLECRSGTIAQFLYSDKNEAQRITNSNFKRAVELS HHCCCCCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHCCCHHEEEEEC GDKNLNIECLNTEFNPKQGIFHNVMAAVMGEERKICSLLRKGIKSLEVNKLGKSKATLNI CCCCCCEEEECCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEE TATNGAARYHKNEALDTIADRSRSNAAKNQISWLMCKSGKDRTGMVATNNFLQQLCSSTQ EECCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCEEHHHHHHHHHHHHHH QDSSNIANSVMMSNHSEFLAGHHGSSRGAAGLKAGGVFTGLKKHILSRYKSRMTPSAIAD HHHHHHHHHHHHCCCHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHCC TNYIKFNSLGHKIANKISDIKNTVLISIKAISKSNTTKHKREHLNNNRENSQASAQQINY CCCEEECHHHHHHHHHHHHHCCEEEEEEEECCCCCCHHHHHHHCCCCCCCHHHHHHHCCC KNNLNLYQDIKLGSAVISTIKNGNIKMHQTKDQQLNLNAIPTSHKKNSKSRLI CCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MDNKNLFNHHSSDDKIINTGQQHNQHDNLHQQSAKNNHSANLQDVQQSVHSFVNEHFQKT CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHH DINRLREQHITDLLLLDKLVDRLFSQLDVNSNNQTFSSIITMSRQRADAEQGIMHFRYNA HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHH LQPILGSSNTSKVIVRDCRLQGISEAGIPVDKKPGEIPEHWLAVMANQARACFEFTDMYI HHHHHCCCCCCEEEEEHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHEEEEEEE DLNLAPHAKEKIVKLLKESKDQIMQQNITEKKLESISREFNEQSLKILKKYNNSTVDVSK EEECCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECC KNIALIRDYCNFNDDHEHVITVGSKIHTSNSPDKQHPVTASMMVAPLSKDILQECSKIGE CCHHHHHHHHCCCCCCCEEEEECCEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH LNKLKSKHHKNISDIYKPILTQKLNQTPLWFQGLSTLEQDLITKHFDKITDNKHILPTSL HHHHHHHHCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHH RNLPGLRNAYVEVRGISENGKLENSHLECRSGTIAQFLYSDKNEAQRITNSNFKRAVELS HHCCCCCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHCCCHHEEEEEC GDKNLNIECLNTEFNPKQGIFHNVMAAVMGEERKICSLLRKGIKSLEVNKLGKSKATLNI CCCCCCEEEECCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEE TATNGAARYHKNEALDTIADRSRSNAAKNQISWLMCKSGKDRTGMVATNNFLQQLCSSTQ EECCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCEEHHHHHHHHHHHHHH QDSSNIANSVMMSNHSEFLAGHHGSSRGAAGLKAGGVFTGLKKHILSRYKSRMTPSAIAD HHHHHHHHHHHHCCCHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHCC TNYIKFNSLGHKIANKISDIKNTVLISIKAISKSNTTKHKREHLNNNRENSQASAQQINY CCCEEECHHHHHHHHHHHHHCCEEEEEEEECCCCCCHHHHHHHCCCCCCCHHHHHHHCCC KNNLNLYQDIKLGSAVISTIKNGNIKMHQTKDQQLNLNAIPTSHKKNSKSRLI CCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA