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The map label for this gene is rimP [H]

Identifier: 189183524

GI number: 189183524

Start: 635774

End: 636256

Strand: Reverse

Name: rimP [H]

Synonym: OTT_0617

Alternate gene names: 189183524

Gene position: 636256-635774 (Counterclockwise)

Preceding gene: 189183530

Following gene: 189183523

Centisome position: 31.67

GC content: 27.12

Gene sequence:

>483_bases
ATGTTAAACGATAAAATAAAAGAGCTAATTACTCCTACTGCAAAAGCCTTAGGATATAAGGTTATAAATGTGAACTTTGT
TGTAAAGCCAGCTATATTAAAAATAGTTATTGATCGTTTTGATGAAAAAAAAGTTAAAGTTTTAGATTGTCAAGCGTTTA
GTAAAGCTATTTCAGCAGTTTTAGATGTTGAAAACATAATACCAGGCAAGTACTTTTTAGAAGTTGAATCTGCTGGTATT
GAGCGAAGTCTAATGGATTTAGAAGATTTTATAAAATTTTTAGGATATACAATACAAGTAAAGCTAGTTGCAGCTATTAA
TGAAAACAAAAAATATATAGGCGTAATTTCTAATATTAAAGGACAAGAAATCACGCTAAATTTGCAAAATGATAGTACTA
TTGCTATAGATTATGATAATATAAAGGTTGCAAAGATAGTTTTTACAGATGAAATGTTTAGACAAATCACCAAAAATTAT
TAG

Upstream 100 bases:

>100_bases
AGAAGCTATTGCTTTGAATTTATATTAGTTGATAATTGCATATATATTTTAATAGCTATTCTAAGGGGTAGTATGTTAAT
AACAAATATTTTACATAAGA

Downstream 100 bases:

>100_bases
CTCAGGAGATATATAAATATGGTTAATCCTATCAATGCTGAAGTGTTAAGAGTTGTTAATTATATTGCTAGAGATAAGGA
TATTTCACAAGATGCCTTAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 160; Mature: 160

Protein sequence:

>160_residues
MLNDKIKELITPTAKALGYKVINVNFVVKPAILKIVIDRFDEKKVKVLDCQAFSKAISAVLDVENIIPGKYFLEVESAGI
ERSLMDLEDFIKFLGYTIQVKLVAAINENKKYIGVISNIKGQEITLNLQNDSTIAIDYDNIKVAKIVFTDEMFRQITKNY

Sequences:

>Translated_160_residues
MLNDKIKELITPTAKALGYKVINVNFVVKPAILKIVIDRFDEKKVKVLDCQAFSKAISAVLDVENIIPGKYFLEVESAGI
ERSLMDLEDFIKFLGYTIQVKLVAAINENKKYIGVISNIKGQEITLNLQNDSTIAIDYDNIKVAKIVFTDEMFRQITKNY
>Mature_160_residues
MLNDKIKELITPTAKALGYKVINVNFVVKPAILKIVIDRFDEKKVKVLDCQAFSKAISAVLDVENIIPGKYFLEVESAGI
ERSLMDLEDFIKFLGYTIQVKLVAAINENKKYIGVISNIKGQEITLNLQNDSTIAIDYDNIKVAKIVFTDEMFRQITKNY

Specific function: Required for maturation of 30S ribosomal subunits [H]

COG id: COG0779

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rimP family [H]

Homologues:

Organism=Escherichia coli, GI226510978, Length=148, Percent_Identity=35.1351351351351, Blast_Score=86, Evalue=1e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003728 [H]

Pfam domain/function: PF02576 DUF150 [H]

EC number: NA

Molecular weight: Translated: 18122; Mature: 18122

Theoretical pI: Translated: 8.38; Mature: 8.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLNDKIKELITPTAKALGYKVINVNFVVKPAILKIVIDRFDEKKVKVLDCQAFSKAISAV
CCCHHHHHHHCCHHHHHCEEEEEEEEEEHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHH
LDVENIIPGKYFLEVESAGIERSLMDLEDFIKFLGYTIQVKLVAAINENKKYIGVISNIK
HHHHHCCCCEEEEEEECCCCHHHHHHHHHHHHHCCEEEEEEEEEEECCCCEEEEEEECCC
GQEITLNLQNDSTIAIDYDNIKVAKIVFTDEMFRQITKNY
CCEEEEEECCCCEEEEEECCEEEEEEEECHHHHHHHHCCC
>Mature Secondary Structure
MLNDKIKELITPTAKALGYKVINVNFVVKPAILKIVIDRFDEKKVKVLDCQAFSKAISAV
CCCHHHHHHHCCHHHHHCEEEEEEEEEEHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHH
LDVENIIPGKYFLEVESAGIERSLMDLEDFIKFLGYTIQVKLVAAINENKKYIGVISNIK
HHHHHCCCCEEEEEEECCCCHHHHHHHHHHHHHCCEEEEEEEEEEECCCCEEEEEEECCC
GQEITLNLQNDSTIAIDYDNIKVAKIVFTDEMFRQITKNY
CCEEEEEECCCCEEEEEECCEEEEEEEECHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA