| Definition | Orientia tsutsugamushi str. Ikeda, complete genome. |
|---|---|
| Accession | NC_010793 |
| Length | 2,008,987 |
Click here to switch to the map view.
The map label for this gene is 189183530
Identifier: 189183530
GI number: 189183530
Start: 645409
End: 646014
Strand: Reverse
Name: 189183530
Synonym: OTT_0623
Alternate gene names: NA
Gene position: 646014-645409 (Counterclockwise)
Preceding gene: 189183531
Following gene: 189183524
Centisome position: 32.16
GC content: 27.39
Gene sequence:
>606_bases TTGTTCTTAGCTGAGTTATTAACAATAGCGATATATTTTTATGTATCTCCATGTAAGGATTGTAAAAATTATTATCTATA TTACTTGAGTCATAAGTATAAAAGATACTTTTGTTTACCAAGTTATAGTAGAATAATACAACTGTGGCCTAGAATGTTGC TACCATTAGCAATATTAATGCATTATCTGAAAGGAGAAGAGACTGGTATATATTATATCGATTCTACAAAGTTAGCAATT TGTCATAACAAACACATTTTCAGCAATAGAGTTTTTAACAAAATTTCTAAAATTGGTAAGAGTAGTTATGGCTGGTTCTT ATGCTTTAAGCTTCATCTTATAATCAATAATAAAGGCGAAATAATGTCAGTTAAAATTACTAAAGGCAATAAAAGCGATC TATCTGTAGCTTCAGTTATTTCTAAAGGCTTATCTGGTAAATTGTTTGGTGATAAAGCTTACATATCTAAAGAGTTATTT CATCAACTGTTGACCAATGGTTTACGTTTATTTACTAATCTTCGTAAAGATATGAAAACATATTTATTGAACATACAAGA TAAGAAGTTATTAAATAAACGTTCTTTAATGCTTTTTGTATACTAG
Upstream 100 bases:
>100_bases ACAGTTATACTATTTAATAGACAATTTTTGCAAGATATATCAAGAGTGTGAGAGAAAGAGATTAATACCAAGTAGTAATC AAAGGAACAGAGATGGGAAG
Downstream 100 bases:
>100_bases ACTTACTTACTCCTAGTCGTTCAGCTCTTTCATATTGATATGCCTCACTATGTTGACTCACATCTTCTTTTAGTTTTTCA ATAGAGATTTTTCTTGGAAC
Product: transposase
Products: NA
Alternate protein names: Transposase IS4 Family Protein; ISPg3 Transposase; Transposase IS4 Family; Transposase And Inactivated Derivative; IS4 Family Transposase; Membrane-Associated Metal-Dependent Hydrolase; Transposase IS; Protease
Number of amino acids: Translated: 201; Mature: 201
Protein sequence:
>201_residues MFLAELLTIAIYFYVSPCKDCKNYYLYYLSHKYKRYFCLPSYSRIIQLWPRMLLPLAILMHYLKGEETGIYYIDSTKLAI CHNKHIFSNRVFNKISKIGKSSYGWFLCFKLHLIINNKGEIMSVKITKGNKSDLSVASVISKGLSGKLFGDKAYISKELF HQLLTNGLRLFTNLRKDMKTYLLNIQDKKLLNKRSLMLFVY
Sequences:
>Translated_201_residues MFLAELLTIAIYFYVSPCKDCKNYYLYYLSHKYKRYFCLPSYSRIIQLWPRMLLPLAILMHYLKGEETGIYYIDSTKLAI CHNKHIFSNRVFNKISKIGKSSYGWFLCFKLHLIINNKGEIMSVKITKGNKSDLSVASVISKGLSGKLFGDKAYISKELF HQLLTNGLRLFTNLRKDMKTYLLNIQDKKLLNKRSLMLFVY >Mature_201_residues MFLAELLTIAIYFYVSPCKDCKNYYLYYLSHKYKRYFCLPSYSRIIQLWPRMLLPLAILMHYLKGEETGIYYIDSTKLAI CHNKHIFSNRVFNKISKIGKSSYGWFLCFKLHLIINNKGEIMSVKITKGNKSDLSVASVISKGLSGKLFGDKAYISKELF HQLLTNGLRLFTNLRKDMKTYLLNIQDKKLLNKRSLMLFVY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23605; Mature: 23605
Theoretical pI: Translated: 10.22; Mature: 10.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFLAELLTIAIYFYVSPCKDCKNYYLYYLSHKYKRYFCLPSYSRIIQLWPRMLLPLAILM CHHHHHHHHHHHHHHCCHHHHHHHEEEEEECCCEEEEECCCHHHHHHHHHHHHHHHHHHH HYLKGEETGIYYIDSTKLAICHNKHIFSNRVFNKISKIGKSSYGWFLCFKLHLIINNKGE HHHCCCCCCEEEEECCEEEEEECCCHHHHHHHHHHHHHCCCCCCEEEEEEEEEEECCCCC IMSVKITKGNKSDLSVASVISKGLSGKLFGDKAYISKELFHQLLTNGLRLFTNLRKDMKT EEEEEEECCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YLLNIQDKKLLNKRSLMLFVY HHHCCCHHHHHCCCCEEEEEC >Mature Secondary Structure MFLAELLTIAIYFYVSPCKDCKNYYLYYLSHKYKRYFCLPSYSRIIQLWPRMLLPLAILM CHHHHHHHHHHHHHHCCHHHHHHHEEEEEECCCEEEEECCCHHHHHHHHHHHHHHHHHHH HYLKGEETGIYYIDSTKLAICHNKHIFSNRVFNKISKIGKSSYGWFLCFKLHLIINNKGE HHHCCCCCCEEEEECCEEEEEECCCHHHHHHHHHHHHHCCCCCCEEEEEEEEEEECCCCC IMSVKITKGNKSDLSVASVISKGLSGKLFGDKAYISKELFHQLLTNGLRLFTNLRKDMKT EEEEEEECCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YLLNIQDKKLLNKRSLMLFVY HHHCCCHHHHHCCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA