Definition Orientia tsutsugamushi str. Ikeda, complete genome.
Accession NC_010793
Length 2,008,987

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The map label for this gene is 189183530

Identifier: 189183530

GI number: 189183530

Start: 645409

End: 646014

Strand: Reverse

Name: 189183530

Synonym: OTT_0623

Alternate gene names: NA

Gene position: 646014-645409 (Counterclockwise)

Preceding gene: 189183531

Following gene: 189183524

Centisome position: 32.16

GC content: 27.39

Gene sequence:

>606_bases
TTGTTCTTAGCTGAGTTATTAACAATAGCGATATATTTTTATGTATCTCCATGTAAGGATTGTAAAAATTATTATCTATA
TTACTTGAGTCATAAGTATAAAAGATACTTTTGTTTACCAAGTTATAGTAGAATAATACAACTGTGGCCTAGAATGTTGC
TACCATTAGCAATATTAATGCATTATCTGAAAGGAGAAGAGACTGGTATATATTATATCGATTCTACAAAGTTAGCAATT
TGTCATAACAAACACATTTTCAGCAATAGAGTTTTTAACAAAATTTCTAAAATTGGTAAGAGTAGTTATGGCTGGTTCTT
ATGCTTTAAGCTTCATCTTATAATCAATAATAAAGGCGAAATAATGTCAGTTAAAATTACTAAAGGCAATAAAAGCGATC
TATCTGTAGCTTCAGTTATTTCTAAAGGCTTATCTGGTAAATTGTTTGGTGATAAAGCTTACATATCTAAAGAGTTATTT
CATCAACTGTTGACCAATGGTTTACGTTTATTTACTAATCTTCGTAAAGATATGAAAACATATTTATTGAACATACAAGA
TAAGAAGTTATTAAATAAACGTTCTTTAATGCTTTTTGTATACTAG

Upstream 100 bases:

>100_bases
ACAGTTATACTATTTAATAGACAATTTTTGCAAGATATATCAAGAGTGTGAGAGAAAGAGATTAATACCAAGTAGTAATC
AAAGGAACAGAGATGGGAAG

Downstream 100 bases:

>100_bases
ACTTACTTACTCCTAGTCGTTCAGCTCTTTCATATTGATATGCCTCACTATGTTGACTCACATCTTCTTTTAGTTTTTCA
ATAGAGATTTTTCTTGGAAC

Product: transposase

Products: NA

Alternate protein names: Transposase IS4 Family Protein; ISPg3 Transposase; Transposase IS4 Family; Transposase And Inactivated Derivative; IS4 Family Transposase; Membrane-Associated Metal-Dependent Hydrolase; Transposase IS; Protease

Number of amino acids: Translated: 201; Mature: 201

Protein sequence:

>201_residues
MFLAELLTIAIYFYVSPCKDCKNYYLYYLSHKYKRYFCLPSYSRIIQLWPRMLLPLAILMHYLKGEETGIYYIDSTKLAI
CHNKHIFSNRVFNKISKIGKSSYGWFLCFKLHLIINNKGEIMSVKITKGNKSDLSVASVISKGLSGKLFGDKAYISKELF
HQLLTNGLRLFTNLRKDMKTYLLNIQDKKLLNKRSLMLFVY

Sequences:

>Translated_201_residues
MFLAELLTIAIYFYVSPCKDCKNYYLYYLSHKYKRYFCLPSYSRIIQLWPRMLLPLAILMHYLKGEETGIYYIDSTKLAI
CHNKHIFSNRVFNKISKIGKSSYGWFLCFKLHLIINNKGEIMSVKITKGNKSDLSVASVISKGLSGKLFGDKAYISKELF
HQLLTNGLRLFTNLRKDMKTYLLNIQDKKLLNKRSLMLFVY
>Mature_201_residues
MFLAELLTIAIYFYVSPCKDCKNYYLYYLSHKYKRYFCLPSYSRIIQLWPRMLLPLAILMHYLKGEETGIYYIDSTKLAI
CHNKHIFSNRVFNKISKIGKSSYGWFLCFKLHLIINNKGEIMSVKITKGNKSDLSVASVISKGLSGKLFGDKAYISKELF
HQLLTNGLRLFTNLRKDMKTYLLNIQDKKLLNKRSLMLFVY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23605; Mature: 23605

Theoretical pI: Translated: 10.22; Mature: 10.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFLAELLTIAIYFYVSPCKDCKNYYLYYLSHKYKRYFCLPSYSRIIQLWPRMLLPLAILM
CHHHHHHHHHHHHHHCCHHHHHHHEEEEEECCCEEEEECCCHHHHHHHHHHHHHHHHHHH
HYLKGEETGIYYIDSTKLAICHNKHIFSNRVFNKISKIGKSSYGWFLCFKLHLIINNKGE
HHHCCCCCCEEEEECCEEEEEECCCHHHHHHHHHHHHHCCCCCCEEEEEEEEEEECCCCC
IMSVKITKGNKSDLSVASVISKGLSGKLFGDKAYISKELFHQLLTNGLRLFTNLRKDMKT
EEEEEEECCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YLLNIQDKKLLNKRSLMLFVY
HHHCCCHHHHHCCCCEEEEEC
>Mature Secondary Structure
MFLAELLTIAIYFYVSPCKDCKNYYLYYLSHKYKRYFCLPSYSRIIQLWPRMLLPLAILM
CHHHHHHHHHHHHHHCCHHHHHHHEEEEEECCCEEEEECCCHHHHHHHHHHHHHHHHHHH
HYLKGEETGIYYIDSTKLAICHNKHIFSNRVFNKISKIGKSSYGWFLCFKLHLIINNKGE
HHHCCCCCCEEEEECCEEEEEECCCHHHHHHHHHHHHHCCCCCCEEEEEEEEEEECCCCC
IMSVKITKGNKSDLSVASVISKGLSGKLFGDKAYISKELFHQLLTNGLRLFTNLRKDMKT
EEEEEEECCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YLLNIQDKKLLNKRSLMLFVY
HHHCCCHHHHHCCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA