| Definition | Orientia tsutsugamushi str. Ikeda, complete genome. |
|---|---|
| Accession | NC_010793 |
| Length | 2,008,987 |
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The map label for this gene is 189183407
Identifier: 189183407
GI number: 189183407
Start: 516888
End: 517385
Strand: Reverse
Name: 189183407
Synonym: OTT_0500
Alternate gene names: NA
Gene position: 517385-516888 (Counterclockwise)
Preceding gene: 189183409
Following gene: 189183403
Centisome position: 25.75
GC content: 32.33
Gene sequence:
>498_bases ATGAAATGTGATCAGATTAAAGAGTTAAAGGATGAAAAATTTCGTCGATTAACAGGAGTAAGGAAGATGACATTTTCAAA GATGGTAGATATTTTGAGGAAAGCTGATGGTCTTAAGAAATCAAAATGTGGGCGTAAAAATAAGCTCAATTTGCAGGAAC AGTTGCTGACAGTCTTAGAATACCTTAGAGAATACCGCACTTATTTCCATATAGGTCAGAACTATGGGATTAGTGAAAGT TCAGCATATAAAGCTGTAAAATGGGTAGAAAACACCCTAGTTAAACACCAAAATTTTGCTCTTTCATGTCGTAAAGCTCT AATGAAGAGTGATATGAATTATGAAGTAGTCTTGATTGATGCTACTGAGAGTCCTATAGAAAGACCTAAAAAAAACAACA ATTCTATTTTATTCATGAAAGAAGAAAAGGCATATACTAAAAGCTCAAATAGTTGTAGACAAGAAAACATACCAAGTAAT ATGTACAGATTTTTCTAA
Upstream 100 bases:
>100_bases TAAAAATTATTAACAGAATTTCTGCAAAAGGATATTAGACTTCTTTCGAAACTAGAGAATGATGTAGAATAGTGTTATAA AGATCTGATTTGAGGTAATA
Downstream 100 bases:
>100_bases CGGTAAAAAGCATGACTTTAGATTATTTAAGGAATCCAAAATTCTTATCCATCCTAAGGTTAAAGCGATTACTGATACAG GATATCAAGGTATACAAAAA
Product: transposase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 165; Mature: 165
Protein sequence:
>165_residues MKCDQIKELKDEKFRRLTGVRKMTFSKMVDILRKADGLKKSKCGRKNKLNLQEQLLTVLEYLREYRTYFHIGQNYGISES SAYKAVKWVENTLVKHQNFALSCRKALMKSDMNYEVVLIDATESPIERPKKNNNSILFMKEEKAYTKSSNSCRQENIPSN MYRFF
Sequences:
>Translated_165_residues MKCDQIKELKDEKFRRLTGVRKMTFSKMVDILRKADGLKKSKCGRKNKLNLQEQLLTVLEYLREYRTYFHIGQNYGISES SAYKAVKWVENTLVKHQNFALSCRKALMKSDMNYEVVLIDATESPIERPKKNNNSILFMKEEKAYTKSSNSCRQENIPSN MYRFF >Mature_165_residues MKCDQIKELKDEKFRRLTGVRKMTFSKMVDILRKADGLKKSKCGRKNKLNLQEQLLTVLEYLREYRTYFHIGQNYGISES SAYKAVKWVENTLVKHQNFALSCRKALMKSDMNYEVVLIDATESPIERPKKNNNSILFMKEEKAYTKSSNSCRQENIPSN MYRFF
Specific function: Involved in the transposition of the insertion sequence [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the transposase 11 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002559 [H]
Pfam domain/function: PF01609 Transposase_11 [H]
EC number: NA
Molecular weight: Translated: 19500; Mature: 19500
Theoretical pI: Translated: 10.21; Mature: 10.21
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 6.7 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 6.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKCDQIKELKDEKFRRLTGVRKMTFSKMVDILRKADGLKKSKCGRKNKLNLQEQLLTVLE CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCHHHHHHHHHH YLREYRTYFHIGQNYGISESSAYKAVKWVENTLVKHQNFALSCRKALMKSDMNYEVVLID HHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCEEEEEEE ATESPIERPKKNNNSILFMKEEKAYTKSSNSCRQENIPSNMYRFF CCCCHHHCCCCCCCCEEEEECCHHHHCCCCCHHHHCCCHHHHHCC >Mature Secondary Structure MKCDQIKELKDEKFRRLTGVRKMTFSKMVDILRKADGLKKSKCGRKNKLNLQEQLLTVLE CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCHHHHHHHHHH YLREYRTYFHIGQNYGISESSAYKAVKWVENTLVKHQNFALSCRKALMKSDMNYEVVLID HHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCEEEEEEE ATESPIERPKKNNNSILFMKEEKAYTKSSNSCRQENIPSNMYRFF CCCCHHHCCCCCCCCEEEEECCHHHHCCCCCHHHHCCCHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1662761 [H]