Definition Orientia tsutsugamushi str. Ikeda, complete genome.
Accession NC_010793
Length 2,008,987

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The map label for this gene is 189183371

Identifier: 189183371

GI number: 189183371

Start: 488519

End: 490306

Strand: Reverse

Name: 189183371

Synonym: OTT_0464

Alternate gene names: NA

Gene position: 490306-488519 (Counterclockwise)

Preceding gene: 189183376

Following gene: 189183370

Centisome position: 24.41

GC content: 30.26

Gene sequence:

>1788_bases
ATGGGACATGTCATTAAAGCAGCAACAAGAATATTTGCAGGAGTGCATAATTTTAGTAAAGCTTTAGCATCTAACAAAAG
CACATTGGCAAATAGTCATCATTGGTTTAATATACAAAATTATTCTAATTCTTTTTCTACAGTTTCAACAAATAGTCATG
TTGTTAATCAAACTGAGAGTACATCAATACAAGATTATTCAAAGCACAGTGATTCAAGTAAGCAATCTCAACTGTTTAAA
CTAGGTGAGTCAGAAAAGAACGCTCAATCATTAGCAGTTTTAATAAAATTAATGAGCAGCAGCAATGTAAATCATATAGA
CAATGTGGGTGAAAGTTTTATTCACAAGATTGGAAAAAATAGTAAGCTAAATTTACTAGACAAGTATTATCTTTTCTGTC
AGCTAAAAGCTAAAGGGGCAAATTTTGATCAAGAAAATAATGTTGGTAATACAGTTGCTAATATTTTGCTTGAAAAATAT
ATAGAAACTGGAGATTCTAAAATATTATCATATTTTCTGAATAATACAGAAATTTACAGTCCTAATAAAGCATTCTTGCT
TTCTCTTATGCGATATATTCAAGAAGCAGGCAATCCTAAGCAGGACGAAATGAATTTATTTGTAAAAACCATCGAAAATC
TACCAAAAAAAAATATTCTGCTGAGTAACGGCGAAGAAATGATGGTTTTAAAACTGTTACTGTCTTATGGATTTTCATCA
TCTTGTACTTTACATAATCAAGATAAAATATTACATGCAGCCAAAAGTATTATAAATTATTATCCACAAGCTTTAGGAAA
AACTGCAGTTGATGAATTTATAAAATATATACAATGCAGTGATACTGTTTCATCATCTGTAGCTCAGTTTGGAGTATTAG
TTATACAGCATTTATCTAGTGATGAAGCTTGCAGTCAACGTTTAATATTAGACTCTTTAGCTAAAAAATATTCATATGCA
GATAAATCAAAAGTTTTACAATCTGCTATAGAAGCATCAGATTCTGAAGCCCTAAATATTAAAGATTTATCTAATAAAGG
AAATACATTTTTGCATGTTCTTAAAAAATCTAGCCTGCAAGACTATCATGAGCTTATTGGTTGTGCTATGGCTTATGGAG
CTGATGTTTTACAAAATGATAAAGGTAAAACTATCTTAGACAAAATTGACCTAAAGAGTTATGATGATCAGCTTCTGATA
CGTGAAATCACATCAAGTGGTTGTTTAGATAAGTTATGTACTGCAAGTGATGCTATTGGTAAATCTCTCTTTCAAAAAGC
AATTAAATTTATGGCAAAAGGAAAGTTGTTTATATTACCAGAAATTAAGAATGCAATTCTAGAGTTTAATCCAAGTCAGG
CTTTATCATCTTTAGCAGAAATGTGTAATAACCGCAAAGTTGACTTAAAGACAGCACTGGAACTTATACAAGATCTTAGC
GCTAAAACTGATCTAAGTAATTTTGTGATGAATTGTTCGCATAGCACTTTAAAAGAAATATCTAAGTTACCATATTGGCA
TGCATTAATTAATTCATTAGAACAAAATGATTGTATAGCTTCATTAACGAGCGCGAATGGAAAATTATATCCTTTATTAG
AAAGTACAAAAGAAACTGAATTAAGTAATGTGTCAGCTTTTGAGCGTAAATTTGCTCCTTCTGTACCGGAAGCATTAGAC
ATTGATCAGTATTTCTTACATGGGCAAAATTTAATTGTAAATGATAGTACTTCAGAAAATGTTGATATGTACTTACCAAC
CATGCAAGCAATTGGTCAGATATCATAA

Upstream 100 bases:

>100_bases
TTAATTTTGTGATAGTAGTAAGCTTAAATTAATAGTTTTAGGTTGGCGGTTTCTAAAATCTATTAATATCATGTAACAAT
AAAAGCTAGGGAGGTCTTAT

Downstream 100 bases:

>100_bases
CGTGCAATGTAAATCTATTTAATGTTAAAGGTTAAGTTAAACGATAAATAACATCAAAAAATAAATTTAGTAAATAACTT
CTTAGTCTATTGTTAAACAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 595; Mature: 594

Protein sequence:

>595_residues
MGHVIKAATRIFAGVHNFSKALASNKSTLANSHHWFNIQNYSNSFSTVSTNSHVVNQTESTSIQDYSKHSDSSKQSQLFK
LGESEKNAQSLAVLIKLMSSSNVNHIDNVGESFIHKIGKNSKLNLLDKYYLFCQLKAKGANFDQENNVGNTVANILLEKY
IETGDSKILSYFLNNTEIYSPNKAFLLSLMRYIQEAGNPKQDEMNLFVKTIENLPKKNILLSNGEEMMVLKLLLSYGFSS
SCTLHNQDKILHAAKSIINYYPQALGKTAVDEFIKYIQCSDTVSSSVAQFGVLVIQHLSSDEACSQRLILDSLAKKYSYA
DKSKVLQSAIEASDSEALNIKDLSNKGNTFLHVLKKSSLQDYHELIGCAMAYGADVLQNDKGKTILDKIDLKSYDDQLLI
REITSSGCLDKLCTASDAIGKSLFQKAIKFMAKGKLFILPEIKNAILEFNPSQALSSLAEMCNNRKVDLKTALELIQDLS
AKTDLSNFVMNCSHSTLKEISKLPYWHALINSLEQNDCIASLTSANGKLYPLLESTKETELSNVSAFERKFAPSVPEALD
IDQYFLHGQNLIVNDSTSENVDMYLPTMQAIGQIS

Sequences:

>Translated_595_residues
MGHVIKAATRIFAGVHNFSKALASNKSTLANSHHWFNIQNYSNSFSTVSTNSHVVNQTESTSIQDYSKHSDSSKQSQLFK
LGESEKNAQSLAVLIKLMSSSNVNHIDNVGESFIHKIGKNSKLNLLDKYYLFCQLKAKGANFDQENNVGNTVANILLEKY
IETGDSKILSYFLNNTEIYSPNKAFLLSLMRYIQEAGNPKQDEMNLFVKTIENLPKKNILLSNGEEMMVLKLLLSYGFSS
SCTLHNQDKILHAAKSIINYYPQALGKTAVDEFIKYIQCSDTVSSSVAQFGVLVIQHLSSDEACSQRLILDSLAKKYSYA
DKSKVLQSAIEASDSEALNIKDLSNKGNTFLHVLKKSSLQDYHELIGCAMAYGADVLQNDKGKTILDKIDLKSYDDQLLI
REITSSGCLDKLCTASDAIGKSLFQKAIKFMAKGKLFILPEIKNAILEFNPSQALSSLAEMCNNRKVDLKTALELIQDLS
AKTDLSNFVMNCSHSTLKEISKLPYWHALINSLEQNDCIASLTSANGKLYPLLESTKETELSNVSAFERKFAPSVPEALD
IDQYFLHGQNLIVNDSTSENVDMYLPTMQAIGQIS
>Mature_594_residues
GHVIKAATRIFAGVHNFSKALASNKSTLANSHHWFNIQNYSNSFSTVSTNSHVVNQTESTSIQDYSKHSDSSKQSQLFKL
GESEKNAQSLAVLIKLMSSSNVNHIDNVGESFIHKIGKNSKLNLLDKYYLFCQLKAKGANFDQENNVGNTVANILLEKYI
ETGDSKILSYFLNNTEIYSPNKAFLLSLMRYIQEAGNPKQDEMNLFVKTIENLPKKNILLSNGEEMMVLKLLLSYGFSSS
CTLHNQDKILHAAKSIINYYPQALGKTAVDEFIKYIQCSDTVSSSVAQFGVLVIQHLSSDEACSQRLILDSLAKKYSYAD
KSKVLQSAIEASDSEALNIKDLSNKGNTFLHVLKKSSLQDYHELIGCAMAYGADVLQNDKGKTILDKIDLKSYDDQLLIR
EITSSGCLDKLCTASDAIGKSLFQKAIKFMAKGKLFILPEIKNAILEFNPSQALSSLAEMCNNRKVDLKTALELIQDLSA
KTDLSNFVMNCSHSTLKEISKLPYWHALINSLEQNDCIASLTSANGKLYPLLESTKETELSNVSAFERKFAPSVPEALDI
DQYFLHGQNLIVNDSTSENVDMYLPTMQAIGQIS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 66080; Mature: 65949

Theoretical pI: Translated: 6.94; Mature: 6.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGHVIKAATRIFAGVHNFSKALASNKSTLANSHHWFNIQNYSNSFSTVSTNSHVVNQTES
CCHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCEEEECCCCCCCCEECCCCCEECCCCC
TSIQDYSKHSDSSKQSQLFKLGESEKNAQSLAVLIKLMSSSNVNHIDNVGESFIHKIGKN
CCHHHHHHCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCC
SKLNLLDKYYLFCQLKAKGANFDQENNVGNTVANILLEKYIETGDSKILSYFLNNTEIYS
CCCHHHHHEEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHCCCEEEC
PNKAFLLSLMRYIQEAGNPKQDEMNLFVKTIENLPKKNILLSNGEEMMVLKLLLSYGFSS
CCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCEEECCCCHHHHHHHHHHHCCCC
SCTLHNQDKILHAAKSIINYYPQALGKTAVDEFIKYIQCSDTVSSSVAQFGVLVIQHLSS
CCEECCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
DEACSQRLILDSLAKKYSYADKSKVLQSAIEASDSEALNIKDLSNKGNTFLHVLKKSSLQ
CHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCEEEHCCCCCCCHHHHHHHHHHHH
DYHELIGCAMAYGADVLQNDKGKTILDKIDLKSYDDQLLIREITSSGCLDKLCTASDAIG
HHHHHHHHHHHHCHHHHCCCCCCCHHHHCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHH
KSLFQKAIKFMAKGKLFILPEIKNAILEFNPSQALSSLAEMCNNRKVDLKTALELIQDLS
HHHHHHHHHHHHCCCEEEEEHHHHHHHCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH
AKTDLSNFVMNCSHSTLKEISKLPYWHALINSLEQNDCIASLTSANGKLYPLLESTKETE
HHHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHHCHHHHHHHCCCCEEEECHHCCCHHH
LSNVSAFERKFAPSVPEALDIDQYFLHGQNLIVNDSTSENVDMYLPTMQAIGQIS
HHHHHHHHHHCCCCCCCHHCCHHHHHCCCCEEEECCCCCCCEEEEHHHHHCCCCC
>Mature Secondary Structure 
GHVIKAATRIFAGVHNFSKALASNKSTLANSHHWFNIQNYSNSFSTVSTNSHVVNQTES
CHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCEEEECCCCCCCCEECCCCCEECCCCC
TSIQDYSKHSDSSKQSQLFKLGESEKNAQSLAVLIKLMSSSNVNHIDNVGESFIHKIGKN
CCHHHHHHCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCC
SKLNLLDKYYLFCQLKAKGANFDQENNVGNTVANILLEKYIETGDSKILSYFLNNTEIYS
CCCHHHHHEEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHCCCEEEC
PNKAFLLSLMRYIQEAGNPKQDEMNLFVKTIENLPKKNILLSNGEEMMVLKLLLSYGFSS
CCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCEEECCCCHHHHHHHHHHHCCCC
SCTLHNQDKILHAAKSIINYYPQALGKTAVDEFIKYIQCSDTVSSSVAQFGVLVIQHLSS
CCEECCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
DEACSQRLILDSLAKKYSYADKSKVLQSAIEASDSEALNIKDLSNKGNTFLHVLKKSSLQ
CHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCEEEHCCCCCCCHHHHHHHHHHHH
DYHELIGCAMAYGADVLQNDKGKTILDKIDLKSYDDQLLIREITSSGCLDKLCTASDAIG
HHHHHHHHHHHHCHHHHCCCCCCCHHHHCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHH
KSLFQKAIKFMAKGKLFILPEIKNAILEFNPSQALSSLAEMCNNRKVDLKTALELIQDLS
HHHHHHHHHHHHCCCEEEEEHHHHHHHCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH
AKTDLSNFVMNCSHSTLKEISKLPYWHALINSLEQNDCIASLTSANGKLYPLLESTKETE
HHHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHHCHHHHHHHCCCCEEEECHHCCCHHH
LSNVSAFERKFAPSVPEALDIDQYFLHGQNLIVNDSTSENVDMYLPTMQAIGQIS
HHHHHHHHHHCCCCCCCHHCCHHHHHCCCCEEEECCCCCCCEEEEHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA