Definition Orientia tsutsugamushi str. Ikeda, complete genome.
Accession NC_010793
Length 2,008,987

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The map label for this gene is 189183324

Identifier: 189183324

GI number: 189183324

Start: 437145

End: 437621

Strand: Reverse

Name: 189183324

Synonym: OTT_0417

Alternate gene names: NA

Gene position: 437621-437145 (Counterclockwise)

Preceding gene: 189183325

Following gene: 189183323

Centisome position: 21.78

GC content: 27.46

Gene sequence:

>477_bases
ATGAGTATTAGAATTTTGAGATTTATCATAGGGTTTATTGCTTTGGTAAACGTTAATAATATATATGCAGTAGAATATGA
GTTAGAAGCTGACAATTTACTAAAGCTTGAGATTTCTGATAGTGGGCCAACAAGAATTAATCTTAAAGATGAAAAAATTA
ATGATATTTTTATGTACCCTCAAAATGCATCTGAAGTTGTAGTTCATGAGTCTGGATTTTTGTTTATTGTTCCACGAGAA
GAAGAAAACAAGGTTTATTTAACTGTAATAGGAGAATACAAAACAATTCAAGATTTAATGTTAATTTTTACTCCAAAAAC
TCCAAACCATGTAATGCTTGTTAATGCTGCTACAAAAATAGAGGAAAAGGATAATTCAAAACAAAACAATACCAATTTGT
TCAGTAATGACGTTAATACAAAAGAATTAACAGCAAAACTTTCTAAAAAACAAAGTAGAAATACTAAGGAAAAATAA

Upstream 100 bases:

>100_bases
GTAAACATATAGCTGTCGATAAGACTTACCTTTTGACTTACAAGCGAACTCCTAATTGCCTTTTATTGTTGACTGGTGTT
AAAGAGAATGGAATAAAAAA

Downstream 100 bases:

>100_bases
AACTGGCTTAAAATGCTAGTTTTTACTTCAAAGACTTGAAGTTCTGGTAGGGTATCTGAAACTCGCTTCAAAGTAAAATT
TCATTCAATGTGGAATTCAC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 158; Mature: 157

Protein sequence:

>158_residues
MSIRILRFIIGFIALVNVNNIYAVEYELEADNLLKLEISDSGPTRINLKDEKINDIFMYPQNASEVVVHESGFLFIVPRE
EENKVYLTVIGEYKTIQDLMLIFTPKTPNHVMLVNAATKIEEKDNSKQNNTNLFSNDVNTKELTAKLSKKQSRNTKEK

Sequences:

>Translated_158_residues
MSIRILRFIIGFIALVNVNNIYAVEYELEADNLLKLEISDSGPTRINLKDEKINDIFMYPQNASEVVVHESGFLFIVPRE
EENKVYLTVIGEYKTIQDLMLIFTPKTPNHVMLVNAATKIEEKDNSKQNNTNLFSNDVNTKELTAKLSKKQSRNTKEK
>Mature_157_residues
SIRILRFIIGFIALVNVNNIYAVEYELEADNLLKLEISDSGPTRINLKDEKINDIFMYPQNASEVVVHESGFLFIVPREE
ENKVYLTVIGEYKTIQDLMLIFTPKTPNHVMLVNAATKIEEKDNSKQNNTNLFSNDVNTKELTAKLSKKQSRNTKEK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18152; Mature: 18021

Theoretical pI: Translated: 5.84; Mature: 5.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSIRILRFIIGFIALVNVNNIYAVEYELEADNLLKLEISDSGPTRINLKDEKINDIFMYP
CCCHHHHHHHHHHHHEECCCEEEEEEEECCCCEEEEEECCCCCEEEEEECCCCCEEEEEC
QNASEVVVHESGFLFIVPREEENKVYLTVIGEYKTIQDLMLIFTPKTPNHVMLVNAATKI
CCCCEEEEECCCEEEEEECCCCCEEEEEEECCCCCCEEEEEEECCCCCCEEEEEECCEEC
EEKDNSKQNNTNLFSNDVNTKELTAKLSKKQSRNTKEK
CCCCCCCCCCCCEECCCCCHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
SIRILRFIIGFIALVNVNNIYAVEYELEADNLLKLEISDSGPTRINLKDEKINDIFMYP
CCHHHHHHHHHHHHEECCCEEEEEEEECCCCEEEEEECCCCCEEEEEECCCCCEEEEEC
QNASEVVVHESGFLFIVPREEENKVYLTVIGEYKTIQDLMLIFTPKTPNHVMLVNAATKI
CCCCEEEEECCCEEEEEECCCCCEEEEEEECCCCCCEEEEEEECCCCCCEEEEEECCEEC
EEKDNSKQNNTNLFSNDVNTKELTAKLSKKQSRNTKEK
CCCCCCCCCCCCEECCCCCHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA