Definition Orientia tsutsugamushi str. Ikeda, complete genome.
Accession NC_010793
Length 2,008,987

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The map label for this gene is 189183238

Identifier: 189183238

GI number: 189183238

Start: 342611

End: 343762

Strand: Direct

Name: 189183238

Synonym: OTT_0331

Alternate gene names: NA

Gene position: 342611-343762 (Clockwise)

Preceding gene: 189183237

Following gene: 189183241

Centisome position: 17.05

GC content: 32.2

Gene sequence:

>1152_bases
ATGCAAGCAATGTCATATATGCTAGCTACTATAAGTTATTGTGGATATGTTACTTATAACAAATTAATTCATGGGCCTTT
ACTAAGTGCTAATTTGGCTATTCATGAAAATTCATGTATTTTTGCTAAAGGAACAAGTAATAGTTTTGAATGTGATGGCA
TTAGAAAATTATTATATATATGTGAGCGTATTAATTGTAGCATACTGAATAAAAAACTGCATTTACTTGAGCTAAATGCA
TCAGCAGAAAAAAAAATTGACGATGATTTCAAGATCAATAGTTTTTGTTCAGCAAATTCACTAGTTTGGATTGATAATAC
TACAGTTTTTAATAAAGCTCATAAAGCATATTCTATGCCTATAATAGATTCATTATCTAGTGCTTGTATTTATCGCCAAA
CAAAAGTACTTTCTTTTTCATCTTATGAACGGCACAATTTTCAATTGTGGTCTTTAATACGTGGCAGTGTTCTAGAAAAA
ATAAAAAGTGTATTAAAAAGTGAAAGTATAATGGATAAGGATATGCATCCAACAGAATGGCAAGCGTTTTGTTCATTTAT
GGATATATTTTTTGTTGAACTTAATCGCAATCCATCTACCTTAATTACTTTCCCAATGTGTTTTGACTTATATGATTACC
TAACTGCTGATGGACATACAGACGATTTAGAAAATTTTATTATTGCCCATGGCTTGCGTTCAGACAGTACAGGTAATCAA
GACATTTTGCGTTGTATAATATTAAACTATTTTCCAATGTCTATGGTAGGTGCTGTAGGTTCTAGCGTATACTTTACTTG
TAAGATACAGAAAGTATTGGAAACTAATAAATTAGGACAATATTCTCACCACTATGATGCACGTGGCGAGCAGGATCAGC
AACAGCCATCACTTTGGCATATAAAAAAGTTTATCAGTCTTGAAAAGAAACTTGCGAAAGCCTATAGCTCTTTTCATAAT
ATTGATGAAACGGGTAATGTATCCACAGTAATGACCAACTTTGCAAAAGCGATAGATGATTTGCTTTGTGATTGGTATGG
AAGTAATGATATTGGCGATAGTTTATGCTCTGATGTAATTGCTGATGGCAATATAGGTCGACTGGCAATAACTGGAATTG
CGACAAGCGTATATAGTAGTTATGAGGATTAA

Upstream 100 bases:

>100_bases
TAGTTAGTTAATTATAAACTTAAAATTTAATCTAAAAAGCCTATTAATTAATTCTTAATGTAGTGTAATTTAACAAAAAT
AAATCAGGAGCTGTGCAAAG

Downstream 100 bases:

>100_bases
GAGACAAAAAATAGCGAGATGTTTTAAACAATATAGTCATTTACAATGAGGTTTGAGCATAGAAAGAAGCAATAAAAATT
AATAGAATCTTCTGTTTTAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 383; Mature: 383

Protein sequence:

>383_residues
MQAMSYMLATISYCGYVTYNKLIHGPLLSANLAIHENSCIFAKGTSNSFECDGIRKLLYICERINCSILNKKLHLLELNA
SAEKKIDDDFKINSFCSANSLVWIDNTTVFNKAHKAYSMPIIDSLSSACIYRQTKVLSFSSYERHNFQLWSLIRGSVLEK
IKSVLKSESIMDKDMHPTEWQAFCSFMDIFFVELNRNPSTLITFPMCFDLYDYLTADGHTDDLENFIIAHGLRSDSTGNQ
DILRCIILNYFPMSMVGAVGSSVYFTCKIQKVLETNKLGQYSHHYDARGEQDQQQPSLWHIKKFISLEKKLAKAYSSFHN
IDETGNVSTVMTNFAKAIDDLLCDWYGSNDIGDSLCSDVIADGNIGRLAITGIATSVYSSYED

Sequences:

>Translated_383_residues
MQAMSYMLATISYCGYVTYNKLIHGPLLSANLAIHENSCIFAKGTSNSFECDGIRKLLYICERINCSILNKKLHLLELNA
SAEKKIDDDFKINSFCSANSLVWIDNTTVFNKAHKAYSMPIIDSLSSACIYRQTKVLSFSSYERHNFQLWSLIRGSVLEK
IKSVLKSESIMDKDMHPTEWQAFCSFMDIFFVELNRNPSTLITFPMCFDLYDYLTADGHTDDLENFIIAHGLRSDSTGNQ
DILRCIILNYFPMSMVGAVGSSVYFTCKIQKVLETNKLGQYSHHYDARGEQDQQQPSLWHIKKFISLEKKLAKAYSSFHN
IDETGNVSTVMTNFAKAIDDLLCDWYGSNDIGDSLCSDVIADGNIGRLAITGIATSVYSSYED
>Mature_383_residues
MQAMSYMLATISYCGYVTYNKLIHGPLLSANLAIHENSCIFAKGTSNSFECDGIRKLLYICERINCSILNKKLHLLELNA
SAEKKIDDDFKINSFCSANSLVWIDNTTVFNKAHKAYSMPIIDSLSSACIYRQTKVLSFSSYERHNFQLWSLIRGSVLEK
IKSVLKSESIMDKDMHPTEWQAFCSFMDIFFVELNRNPSTLITFPMCFDLYDYLTADGHTDDLENFIIAHGLRSDSTGNQ
DILRCIILNYFPMSMVGAVGSSVYFTCKIQKVLETNKLGQYSHHYDARGEQDQQQPSLWHIKKFISLEKKLAKAYSSFHN
IDETGNVSTVMTNFAKAIDDLLCDWYGSNDIGDSLCSDVIADGNIGRLAITGIATSVYSSYED

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 43286; Mature: 43286

Theoretical pI: Translated: 6.08; Mature: 6.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.4 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
6.3 %Cys+Met (Translated Protein)
3.4 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
6.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQAMSYMLATISYCGYVTYNKLIHGPLLSANLAIHENSCIFAKGTSNSFECDGIRKLLYI
CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCEEEEECCCCCCCHHHHHHHHHH
CERINCSILNKKLHLLELNASAEKKIDDDFKINSFCSANSLVWIDNTTVFNKAHKAYSMP
HHHCCHHHHCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCEEEECCCHHHHHHHHHHCCC
IIDSLSSACIYRQTKVLSFSSYERHNFQLWSLIRGSVLEKIKSVLKSESIMDKDMHPTEW
HHHHHHHHHHHHHHHEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH
QAFCSFMDIFFVELNRNPSTLITFPMCFDLYDYLTADGHTDDLENFIIAHGLRSDSTGNQ
HHHHHHHHHHEEEECCCCCEEEEHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCH
DILRCIILNYFPMSMVGAVGSSVYFTCKIQKVLETNKLGQYSHHYDARGEQDQQQPSLWH
HHHHHHHHHHHHHHHHHHCCCCEEEEEEEHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHH
IKKFISLEKKLAKAYSSFHNIDETGNVSTVMTNFAKAIDDLLCDWYGSNDIGDSLCSDVI
HHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
ADGNIGRLAITGIATSVYSSYED
CCCCCCEEEEHHHHHHHHHCCCC
>Mature Secondary Structure
MQAMSYMLATISYCGYVTYNKLIHGPLLSANLAIHENSCIFAKGTSNSFECDGIRKLLYI
CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCEEEEECCCCCCCHHHHHHHHHH
CERINCSILNKKLHLLELNASAEKKIDDDFKINSFCSANSLVWIDNTTVFNKAHKAYSMP
HHHCCHHHHCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCEEEECCCHHHHHHHHHHCCC
IIDSLSSACIYRQTKVLSFSSYERHNFQLWSLIRGSVLEKIKSVLKSESIMDKDMHPTEW
HHHHHHHHHHHHHHHEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH
QAFCSFMDIFFVELNRNPSTLITFPMCFDLYDYLTADGHTDDLENFIIAHGLRSDSTGNQ
HHHHHHHHHHEEEECCCCCEEEEHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCH
DILRCIILNYFPMSMVGAVGSSVYFTCKIQKVLETNKLGQYSHHYDARGEQDQQQPSLWH
HHHHHHHHHHHHHHHHHHCCCCEEEEEEEHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHH
IKKFISLEKKLAKAYSSFHNIDETGNVSTVMTNFAKAIDDLLCDWYGSNDIGDSLCSDVI
HHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
ADGNIGRLAITGIATSVYSSYED
CCCCCCEEEEHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA