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The map label for this gene is traB [C]

Identifier: 189183219

GI number: 189183219

Start: 324241

End: 324714

Strand: Direct

Name: traB [C]

Synonym: OTT_0312

Alternate gene names: 189183219

Gene position: 324241-324714 (Clockwise)

Preceding gene: 189183218

Following gene: 189183220

Centisome position: 16.14

GC content: 38.61

Gene sequence:

>474_bases
GTGGAAGGCTGGTTGATAGGCGAAGACGGACGTTCTGGAATTAAAGGAATCGTGGTAGATAAATCGTCTAACGTAGTAAG
AATGGCAGCATTAAATGGAGTATTTAGCAGTATAGCTAAGTTTCTGCAATCTAAGGCTATTAAACCTGATATGCTACCAA
CTTTAAACCTAGTAGCTGGAGGCCAACAACAAGAGTTTCAGATTGGAGATGCGCTTCAGTCTGGAGCTTACGCTGGAGCT
AGCAATGCTTTTGATAAGCTAGCTGATTTTGCTATAAAACGAGCTGATTCTATGAGCCCAGTCGTTCTTATTGCGTCAGG
TAGAGTCATCGATGTTGTATTTAAAAAAGGGTTTGACTTACTTGAGCACAAGAAGAAGCCACATAATTCAACTTATACAC
CATCAACTAGCAATGAAAAAGTTAATTCTCATAATCAATTTAACCAATCACAAAAGTTAGAGGAGCATTTATAA

Upstream 100 bases:

>100_bases
AAATGCTAGTTTTTACTTTAAAGCTTGTTAAGCTCAGCATCAAGCATATTAAAACTGCTTCAAAGTAAAATTTCATTATG
GAGATATTATCGAGAAAAAG

Downstream 100 bases:

>100_bases
TGAAGTTTTTATTATTGCTATTGGGCTGTATGAGCCTAACCAGGTACATTTAAATGTTTAAGACTACTGTGCTGTTATAA
GCCTTTCAGAGTGTTAAATT

Product: putative conjugative transfer protein TraB

Products: NA

Alternate protein names: Conjugative Transfer Protein TraB; Sex Pilus Assembly Protein; Conjugative Pilus Assembly Protein; Conjugal Transfer Protein TraB

Number of amino acids: Translated: 157; Mature: 157

Protein sequence:

>157_residues
MEGWLIGEDGRSGIKGIVVDKSSNVVRMAALNGVFSSIAKFLQSKAIKPDMLPTLNLVAGGQQQEFQIGDALQSGAYAGA
SNAFDKLADFAIKRADSMSPVVLIASGRVIDVVFKKGFDLLEHKKKPHNSTYTPSTSNEKVNSHNQFNQSQKLEEHL

Sequences:

>Translated_157_residues
MEGWLIGEDGRSGIKGIVVDKSSNVVRMAALNGVFSSIAKFLQSKAIKPDMLPTLNLVAGGQQQEFQIGDALQSGAYAGA
SNAFDKLADFAIKRADSMSPVVLIASGRVIDVVFKKGFDLLEHKKKPHNSTYTPSTSNEKVNSHNQFNQSQKLEEHL
>Mature_157_residues
MEGWLIGEDGRSGIKGIVVDKSSNVVRMAALNGVFSSIAKFLQSKAIKPDMLPTLNLVAGGQQQEFQIGDALQSGAYAGA
SNAFDKLADFAIKRADSMSPVVLIASGRVIDVVFKKGFDLLEHKKKPHNSTYTPSTSNEKVNSHNQFNQSQKLEEHL

Specific function: Involved In F Pilus Assembly. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17020; Mature: 17020

Theoretical pI: Translated: 9.52; Mature: 9.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEGWLIGEDGRSGIKGIVVDKSSNVVRMAALNGVFSSIAKFLQSKAIKPDMLPTLNLVAG
CCCCEECCCCCCCCEEEEEECCCCEEEHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCC
GQQQEFQIGDALQSGAYAGASNAFDKLADFAIKRADSMSPVVLIASGRVIDVVFKKGFDL
CCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCEEEHHHHCCHHH
LEHKKKPHNSTYTPSTSNEKVNSHNQFNQSQKLEEHL
HHHCCCCCCCCCCCCCCCCCCCCCHHHCHHHHHHHCC
>Mature Secondary Structure
MEGWLIGEDGRSGIKGIVVDKSSNVVRMAALNGVFSSIAKFLQSKAIKPDMLPTLNLVAG
CCCCEECCCCCCCCEEEEEECCCCEEEHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCC
GQQQEFQIGDALQSGAYAGASNAFDKLADFAIKRADSMSPVVLIASGRVIDVVFKKGFDL
CCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCEEEHHHHCCHHH
LEHKKKPHNSTYTPSTSNEKVNSHNQFNQSQKLEEHL
HHHCCCCCCCCCCCCCCCCCCCCCHHHCHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA