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The map label for this gene is yfiO [C]

Identifier: 189183077

GI number: 189183077

Start: 166062

End: 166856

Strand: Reverse

Name: yfiO [C]

Synonym: OTT_0170

Alternate gene names: 189183077

Gene position: 166856-166062 (Counterclockwise)

Preceding gene: 189183084

Following gene: 189183076

Centisome position: 8.31

GC content: 30.94

Gene sequence:

>795_bases
ATGTATAACCTAAATACTATAATAAATAAATTACTTAATATGTTTAGATTTATTTGCACTCTTTTTGTTTTGTTATGTTT
TACTAACTGCATAGTCTTTGCAAAAGAAAAAACAACAATTACTTGCCTTTCAGAAGATGATGCATACTCAAGAGCTGAGT
TGCTCTTTCAGAAGAAAAAATATAATGCTGCTGCAAAGCAATTTTTTGATATTTTTGTTCAACATCTTGGCTCAAATACT
GCAACAAAGGCAGAATTAATGCGAGGCTATAGTCTATACTTAGCAGGACAATATTCAGAAGCATCTGAGGTGCTAGATAA
TTTTATTAGATTACACCCTGTGCATCAAAAAATTGCGGATGTATACTATTTAAAAGCTCTGGCAGAATACAAGCAAGCTC
ATAATCAACAAGATCTAGAGCAGCTTCTTCATGCAAGATTAGAGCTACAGCAAGTAATAGATAAATTTCCTAAAAGTGAT
TTTGCTATAAAAGCAAAAGAAAAAATAAATGTTATCTCCAAAAATTTAGCTGGTAGTCAAATTGATATCGGAAAGTTTTA
TTTAAATAAGAAAAATCCTATTGCAGCTTTAAATAGATTTAATACTGTAGTGGATAAGTATTCTCATACATCATATTATC
CAGAAGCTATTTATAGAATTGCTCAAAGCTATGCACTGTTAGGACGCAAGCAAGAAATGAAAGAACAATTAGCTATTTTG
AACAGTAAATTTCCAAACAGCACTTGGTCTAAACGAGCTAGCTCATTATTACAGCTCAATGATTGTAATGCGTAA

Upstream 100 bases:

>100_bases
TGTCGCTCATAAAAGCGTGCTGGTTCAAGTCCAGTCAAGGGCACCAACTGTTTTATTATTTATTTAATATTTGTACAATA
AAATAATATTAAATTTAGTA

Downstream 100 bases:

>100_bases
ATCAATTCCATGTAATGCAGCATTTTTATACTAGATAGACTTGATGTTGCCATCTCTTCCATTCAAAAAGCATGTTTGAA
TAATTTCATAGTAGTTTTTG

Product: ComL-like lipoprotein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 264; Mature: 264

Protein sequence:

>264_residues
MYNLNTIINKLLNMFRFICTLFVLLCFTNCIVFAKEKTTITCLSEDDAYSRAELLFQKKKYNAAAKQFFDIFVQHLGSNT
ATKAELMRGYSLYLAGQYSEASEVLDNFIRLHPVHQKIADVYYLKALAEYKQAHNQQDLEQLLHARLELQQVIDKFPKSD
FAIKAKEKINVISKNLAGSQIDIGKFYLNKKNPIAALNRFNTVVDKYSHTSYYPEAIYRIAQSYALLGRKQEMKEQLAIL
NSKFPNSTWSKRASSLLQLNDCNA

Sequences:

>Translated_264_residues
MYNLNTIINKLLNMFRFICTLFVLLCFTNCIVFAKEKTTITCLSEDDAYSRAELLFQKKKYNAAAKQFFDIFVQHLGSNT
ATKAELMRGYSLYLAGQYSEASEVLDNFIRLHPVHQKIADVYYLKALAEYKQAHNQQDLEQLLHARLELQQVIDKFPKSD
FAIKAKEKINVISKNLAGSQIDIGKFYLNKKNPIAALNRFNTVVDKYSHTSYYPEAIYRIAQSYALLGRKQEMKEQLAIL
NSKFPNSTWSKRASSLLQLNDCNA
>Mature_264_residues
MYNLNTIINKLLNMFRFICTLFVLLCFTNCIVFAKEKTTITCLSEDDAYSRAELLFQKKKYNAAAKQFFDIFVQHLGSNT
ATKAELMRGYSLYLAGQYSEASEVLDNFIRLHPVHQKIADVYYLKALAEYKQAHNQQDLEQLLHARLELQQVIDKFPKSD
FAIKAKEKINVISKNLAGSQIDIGKFYLNKKNPIAALNRFNTVVDKYSHTSYYPEAIYRIAQSYALLGRKQEMKEQLAIL
NSKFPNSTWSKRASSLLQLNDCNA

Specific function: Unknown

COG id: COG4105

COG function: function code R; DNA uptake lipoprotein

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 4 TPR repeats [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017689
- InterPro:   IPR013026
- InterPro:   IPR011990 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30413; Mature: 30413

Theoretical pI: Translated: 9.54; Mature: 9.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYNLNTIINKLLNMFRFICTLFVLLCFTNCIVFAKEKTTITCLSEDDAYSRAELLFQKKK
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCEEEEECCCCHHHHHHHHHHHHH
YNAAAKQFFDIFVQHLGSNTATKAELMRGYSLYLAGQYSEASEVLDNFIRLHPVHQKIAD
HHHHHHHHHHHHHHHHCCCCHHHHHHHHCHHHEEECCCCHHHHHHHHHHHHHHHHHHHHH
VYYLKALAEYKQAHNQQDLEQLLHARLELQQVIDKFPKSDFAIKAKEKINVISKNLAGSQ
HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHCCCCCC
IDIGKFYLNKKNPIAALNRFNTVVDKYSHTSYYPEAIYRIAQSYALLGRKQEMKEQLAIL
EEHHHHEECCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHH
NSKFPNSTWSKRASSLLQLNDCNA
HCCCCCCHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MYNLNTIINKLLNMFRFICTLFVLLCFTNCIVFAKEKTTITCLSEDDAYSRAELLFQKKK
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCEEEEECCCCHHHHHHHHHHHHH
YNAAAKQFFDIFVQHLGSNTATKAELMRGYSLYLAGQYSEASEVLDNFIRLHPVHQKIAD
HHHHHHHHHHHHHHHHCCCCHHHHHHHHCHHHEEECCCCHHHHHHHHHHHHHHHHHHHHH
VYYLKALAEYKQAHNQQDLEQLLHARLELQQVIDKFPKSDFAIKAKEKINVISKNLAGSQ
HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHCCCCCC
IDIGKFYLNKKNPIAALNRFNTVVDKYSHTSYYPEAIYRIAQSYALLGRKQEMKEQLAIL
EEHHHHEECCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHH
NSKFPNSTWSKRASSLLQLNDCNA
HCCCCCCHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9823893 [H]